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TIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 30-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae G54
- locus tag: SPG_0929
- pan locus tag?:
- symbol: phtD
- pan gene symbol?: —
- synonym:
- product: pneumococcal histidine triad protein D
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPG_0929
- symbol: phtD
- product: pneumococcal histidine triad protein D
- replicon: chromosome
- strand: +
- coordinates: 894104..894781
- length: 678
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP001015 (894104..894781) NCBI
- BioCyc:
- MicrobesOnline: 5756198 MicrobesOnline
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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661ATGCCTTACAATCTTCAATATACTGTAGAAGTCAAAAACGGTAGTTTAATCATACCTCAT
TATGACCATTACCATAACATCAAATTTGAGTGGTTTGACGAAGGCCTTTATGAGGCACCT
AAGGGGTATACTCTTGAGGATCTTTTGGCGACTGTCAAGTACTATGTCGAACATCCAAAC
GAACGTCCGCATTCAGATAATGGTTTTGGTAACGCTAGCGACCATGTTCAAAGAAACAAA
AATGGTCAAGCTGATACCAATCAAACGGAGAAACCTCAGACAGAAAAACCTGATGAAGAT
AAGGGACATGATGAAGTAAGTGAGCCAACTCACCCTGAATCTGATGAAAAAGAGAATCAC
GCTGGTTTAAATCCTTCAGCAGATAATCTTTATAAACCAAGCACTGATACGGAAGAGACA
GAGGAAGAAGCTGAAGATACTACAGATGAGGCTGAAATTCCTCAAGTAGAGCATTCTGTT
ATTAACGCTAAGATAGCAGATGCGGAGGCCTTGCTAGAAAAAGTAACAGATCCTAGTATT
AGACAAAATGCTATGGAGACATTGACTGGTCTAAAAAGTAGTCTTCTTCTCGGAACGAAA
GATAATAACACTATTTCAGCAGAAGTAGATAGTCTCTTGGCTTTGTTAAAAGAAAGTCAA
CCGGCTCCTATACAGTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPG_0929
- symbol: PhtD
- description: pneumococcal histidine triad protein D
- length: 225
- theoretical pI: 4.19991
- theoretical MW: 25196.1
- GRAVY: -0.995556
⊟Function[edit | edit source]
- TIGRFAM: cobaltochelatase subunit (TIGR02442; EC 6.6.1.2; HMM-score: 7.1)
- TheSEED :
- Streptococcal histidine triad protein
- PFAM: no clan defined Strep_his_triad; Streptococcal histidine triad protein (PF04270; HMM-score: 13.6)and 3 moreDMT (CL0184) Zip; ZIP Zinc transporter (PF02535; HMM-score: 6.7)Peptidase_AD (CL0130) Presenilin; Presenilin (PF01080; HMM-score: 6.5)no clan defined DNA_pol_phi; DNA polymerase phi (PF04931; HMM-score: 5.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.002592
- TAT(Tat/SPI): 0.000126
- LIPO(Sec/SPII): 0.000317
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ACF56763 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MPYNLQYTVEVKNGSLIIPHYDHYHNIKFEWFDEGLYEAPKGYTLEDLLATVKYYVEHPNERPHSDNGFGNASDHVQRNKNGQADTNQTEKPQTEKPDEDKGHDEVSEPTHPESDEKENHAGLNPSADNLYKPSTDTEETEEEAEDTTDEAEIPQVEHSVINAKIADAEALLEKVTDPSIRQNAMETLTGLKSSLLLGTKDNNTISAEVDSLLALLKESQPAPIQ
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: SPG_0927 > phtD > phtD
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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