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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 30-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae G54
- locus tag: SPG_2069 [new locus tag: SPG_RS10360 ]
- pan locus tag?: PNEUPAN003674000
- symbol: SPG_2069
- pan gene symbol?: ulaR2
- synonym:
- product: transcriptional regulator, BglG family
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPG_2069 [new locus tag: SPG_RS10360 ]
- symbol: SPG_2069
- product: transcriptional regulator, BglG family
- replicon: chromosome
- strand: -
- coordinates: 1956542..1958167
- length: 1626
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP001015 (1956542..1958167) NCBI
- BioCyc: see SPG_RS10360
- MicrobesOnline: 5757336 MicrobesOnline
- PneumoBrowse for strain D39V: SPV_1961 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1621ATGTTTGATTATAGAGCACTAGTTATTTTGATGACTTTGATGGATCATTGTGAGCTATCA
TTATATGAATTATCTGTTAAGGTGAGCTTACCTATAAAGGAAGTCAAAGAAGGAATAGAT
TATTTAGTGCCTTATCTAGCTAATAAAGGGATAGTGCTGGATAAAAAGCAAGGTCGCTAT
AGTTTATCAAATCGTACGAAGCAGTCTTTGACAGATATTATTAAGTCGGATGAATTGGTT
TTACCAAAGTCGACTCGCTTAGCTTTAATCTATCTTTACACTTTTTGCCGATTAGATTTT
ATATCGAATAATCATTACCAAGACTTTTTGAAAGTAAGTAAGAATACAACCTTATCTGAT
ATTCAATCATTAAGAAAGATTATGTTAGATAATGATTTGGAGCTAGGGTACAGTAGAGCA
AAAGGTTATACTTTACACGGTTCAGAGTGGAATAAGCACCGCTTAGCTTTTCAAATGGTT
AGTGAGTTGCTGGAATCCTCCATAGGGATTTGGGGTTTGGATTATGTTTTATCCAGTTGG
GGGTATTCATTAACTTATGATTTGATTGATCAGGTAGTTAAAGATTATTATGAGAAGCTA
CAGCTAGTACCTATTGTTAATCAATTAAAAGTTTACCTTTTCGGTTTAGTATTCATTCTG
TGTAGGTATCAAAGGGATGTTGAAAGAGTATGTCTTTCAGAGACATTAGTATCTCCTGTT
ATTCAAGATATAACCACTATTTTATTGGATACAGTGGTTGATTTGGGAATTATAGATACG
GTGTTTTCTGAGGATGATTATCGCTATATCACCGTTTTATTATCAAGTTGCTTTGAAGGT
GAAGTAGATGTTGCTCCGGTTTACTTTAATCAATTAACAGAGGCTATTATAAGTAGAATG
GAAGATATTTCTTTGTTACATTTTAAACAAAGGGAAGGATTGAGAGAAAATCTTCGCCGC
CACCTTATACCGGCTTACTATAGATTAAAGTTCGGCCTACCTAGTTCAAATGAATATGTA
TTGCATGTTAAAGAACATTATCCTGATTTATTTGAATTAGTCAAAGATTCTTTGATGCCC
TTGATGGACGCTATTGACAATCCCATACCTGATAGTGAAACAGCATATTTTGTTATCCAT
TTCGGAGGTTATTTAAAGAAAGCAGATACTTTGCCTCAAAAATGCTATAAAGCAGCAATC
ATTTGTCCTAATGGTGTTAGTTCTTCATTGATGTTAAAAGAGAATCTATTAGCATTATTT
CCTCAAATTGAGTTTATAGGAACCTCAAAGATTGATGATTTACAGGTGAAAGCTAGTAGT
GACTATGATATGGTTTTTTCTACCATAAAGGTGGAGACAGAAAAGCCAAATTATCTAGTT
TCGGTTATGATGACTGAAGAGCAAGCAATACAACTAGTAGAACTAGTGTTAAAAGATTTT
CCGAATTTAGAGTATGGAGATTTTGAGATTGAACAAATCCTGAATATTGTCAAAAGATAT
GGAATTATTACACAAGAATTGGAATTAAGATTGGCGTTAAAGAATTATCTTTACCAAAAA
AATGATAGAAAGGAAATTGTACCAGTGCTAGAACAACTTATTACCAAAGCAAACCTATCA
GGTTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPG_2069 [new locus tag: SPG_RS10360 ]
- symbol: SPG_2069
- description: transcriptional regulator, BglG family
- length: 541
- theoretical pI: 4.91427
- theoretical MW: 62442
- GRAVY: 0.000554528
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- Transcriptional regulator, BglG family
- PFAM: PRD (CL0166) PRD; PRD domain (PF00874; HMM-score: 65.4)and 3 morePhosphatase (CL0031) PTS_IIB; PTS system, Lactose/Cellobiose specific IIB subunit (PF02302; HMM-score: 24.5)HTH (CL0123) Mga; Mga helix-turn-helix domain (PF05043; HMM-score: 20.6)HTH_9; RNA polymerase III subunit RPC82 helix-turn-helix domain (PF08221; HMM-score: 15.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors: HPr, phosphocarrier protein; SgaB2, ascorbate-specific PTS system, EIIB component
- gene regulated by UlaR2*, TF important in Ascorbate utilizationRegPrecise
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.038168
- TAT(Tat/SPI): 0.000989
- LIPO(Sec/SPII): 0.036982
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ACF55170 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MFDYRALVILMTLMDHCELSLYELSVKVSLPIKEVKEGIDYLVPYLANKGIVLDKKQGRYSLSNRTKQSLTDIIKSDELVLPKSTRLALIYLYTFCRLDFISNNHYQDFLKVSKNTTLSDIQSLRKIMLDNDLELGYSRAKGYTLHGSEWNKHRLAFQMVSELLESSIGIWGLDYVLSSWGYSLTYDLIDQVVKDYYEKLQLVPIVNQLKVYLFGLVFILCRYQRDVERVCLSETLVSPVIQDITTILLDTVVDLGIIDTVFSEDDYRYITVLLSSCFEGEVDVAPVYFNQLTEAIISRMEDISLLHFKQREGLRENLRRHLIPAYYRLKFGLPSSNEYVLHVKEHYPDLFELVKDSLMPLMDAIDNPIPDSETAYFVIHFGGYLKKADTLPQKCYKAAIICPNGVSSSLMLKENLLALFPQIEFIGTSKIDDLQVKASSDYDMVFSTIKVETEKPNYLVSVMMTEEQAIQLVELVLKDFPNLEYGDFEIEQILNIVKRYGIITQELELRLALKNYLYQKNDRKEIVPVLEQLITKANLSG
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator: UlaR2* regulon
UlaR2* (TF) important in Ascorbate utilization; RegPrecise
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1961 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
Muhammad Afzal, Sulman Shafeeq, Oscar P Kuipers
Ascorbic acid-dependent gene expression in Streptococcus pneumoniae and the activator function of the transcriptional regulator UlaR2.
Front Microbiol: 2015, 6;72
[PubMed:25717320] [WorldCat.org] [DOI] (P e)