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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 31-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae Hungary19A-6
- locus tag: SPH_0382 [new locus tag: SPH_RS01855 ]
- pan locus tag?: PNEUPAN001000000
- symbol: SPH_0382
- pan gene symbol?: bglA
- synonym:
- product: glycosyl hydrolase, family 1
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPH_0382 [new locus tag: SPH_RS01855 ]
- symbol: SPH_0382
- product: glycosyl hydrolase, family 1
- replicon: chromosome
- strand: +
- coordinates: 328548..329927
- length: 1380
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP000936 (328548..329927) NCBI
- BioCyc: see SPH_RS01855
- MicrobesOnline: 5695231 MicrobesOnline
- PneumoBrowse for strain D39V: SPV_0247 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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1321ATGCTAAGATTTCCAAAGGATTTTGTCTGGGGATCCTCTACTTCTGGACCGCAGACAGAA
GGACGTGTAGCTGGTGACGGTAAGGGAGACAATCTCTGGGATTACTGGTTCCAAGTGGAG
CCAAATCGTTACTATAATGGGATTGGTTCAGATAAGACATCGACTTTTTATGAAAATTGG
GAGCGGGATATTGAGCTTTTGTTAGAGACTGGTCACACAGCCTTTCGGACTTCTATTCAG
TGGTCACGGATTTTTCCACAAGGCTGTGGAAAAGTCAACACTCAAGGTGTGGATTTTTAT
CGTAAGGTCTTTGAGGCTATTAAGGCTAAAGGAATTCGTCTGTTAGTCAATCTCTATCAT
TTTGATTTACCTTTTGCCCTTCAAGAGGATGGTGATGGTTGGGAAAATAAGGCGACAGTC
TCAGCCTATGAAGACTATGCTCGTTTTTGTTTTGAGACTTATGGAGATTTAGTGGATCAA
TGGATTACCTTTAACGAGCCCATCGTTCCTGTAGAATTTGGTTATTTTTATGATGCCCAT
TATCCACATAAGGTGGATGCAGAGGCAGCTGTTAAGGTAGCCTATCATACACAATTGGCC
AGCAGCCGGGCTGTTAAGGCTTGCCATGAACTTTTGCCTGATTCCAAGATTGGGATTGTC
CTCAACTTGACACCGGCTTATCCACGTAGCCAGCATCCTGCTGATGTCAAGGCAGCTCGT
ATTGCGGCCCTTTTTCAGGCCCAATCTTTCTTAGATCCATCTGTCTTGGGGACTTATCCA
CAGGAGTTGGTAGAAATCTTGCATGAACACGGTCTTTTACCTGATGCTACAGAGGAAGAG
TTGGAACTCATTCGTGATAATACGGTGGACTTCCTTGGTGTGAACTACTATCAACCTTTG
CGTGTTATGGCTCCTCGATTTGCTAAGCATCCAGAGAGTCCACTCTTACCAGAACATTTT
TACGAGCCTTATGTGATGCCTGGACGTAAAATCAATTCTCACCGTGGTTGGGAGATTTAT
GAGCAAGGGATTTATGACATCGCCCAAAATATCAAGGAAAATTATGGCAATATTGAATGG
ATGTTGACTGAGAATGGTATGGGTGTTGAAGGGGAAGAAAAATTCCGTCAAGATGGAATG
ATTCAAGATGATTACCGTATTGACTTTGTAAAAGGTCATCTTCGTGAACTTCACCGTGCC
ATTGAAGATGGTGCCAACTGTAAGGGCTACTTGATTTGGACCTTTATTGACTGCTGGTCA
TGGCTCAACAGCTATAAAAATCGCTATGGTTTGGTCGAATTAGACTTGGAAACGCAAGAA
CGTCGTCTGAAGAAATCAGGCCACTGGTTCAAAAAATTAAGCGATAATAATGGATTTTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPH_0382 [new locus tag: SPH_RS01855 ]
- symbol: SPH_0382
- description: glycosyl hydrolase, family 1
- length: 459
- theoretical pI: 5.07539
- theoretical MW: 53170.3
- GRAVY: -0.515468
⊟Function[edit | edit source]
- TIGRFAM: beta-galactosidase (TIGR03356; HMM-score: 394.2)and 1 moreEnergy metabolism Biosynthesis and degradation of polysaccharides 6-phospho-beta-galactosidase (TIGR01233; EC 3.2.1.85; HMM-score: 313.8)
- TheSEED :
- Beta-glucosidase (EC 3.2.1.21)
and 1 more - PFAM: Glyco_hydro_tim (CL0058) Glyco_hydro_1; Glycosyl hydrolase family 1 (PF00232; HMM-score: 433.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 8.61
- Cytoplasmic Membrane Score: 1.37
- Cellwall Score: 0.01
- Extracellular Score: 0.01
- Internal Helices: 0
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.9685
- Cytoplasmic Membrane Score: 0.0002
- Cell wall & surface Score: 0.0002
- Extracellular Score: 0.0311
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.046516
- TAT(Tat/SPI): 0.002732
- LIPO(Sec/SPII): 0.005768
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MLRFPKDFVWGSSTSGPQTEGRVAGDGKGDNLWDYWFQVEPNRYYNGIGSDKTSTFYENWERDIELLLETGHTAFRTSIQWSRIFPQGCGKVNTQGVDFYRKVFEAIKAKGIRLLVNLYHFDLPFALQEDGDGWENKATVSAYEDYARFCFETYGDLVDQWITFNEPIVPVEFGYFYDAHYPHKVDAEAAVKVAYHTQLASSRAVKACHELLPDSKIGIVLNLTPAYPRSQHPADVKAARIAALFQAQSFLDPSVLGTYPQELVEILHEHGLLPDATEEELELIRDNTVDFLGVNYYQPLRVMAPRFAKHPESPLLPEHFYEPYVMPGRKINSHRGWEIYEQGIYDIAQNIKENYGNIEWMLTENGMGVEGEEKFRQDGMIQDDYRIDFVKGHLRELHRAIEDGANCKGYLIWTFIDCWSWLNSYKNRYGLVELDLETQERRLKKSGHWFKKLSDNNGF
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0247 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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