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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 31-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae Hungary19A-6
- locus tag: SPH_1251 [new locus tag: SPH_RS06055 ]
- pan locus tag?: PNEUPAN002181000
- symbol: SPH_1251
- pan gene symbol?: —
- synonym:
- product:
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: pseudogene
- locus tag: SPH_1251 [new locus tag: SPH_RS06055 ]
- symbol: SPH_1251
- product:
- replicon: chromosome
- strand: +
- coordinates: 1157740..1163963
- length: 6224
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP000936 (1157740..1163963) NCBI
- BioCyc: see SPH_RS06055
- MicrobesOnline: 5696083 MicrobesOnline
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201
1261
1321
1381
1441
1501
1561
1621
1681
1741
1801
1861
1921
1981
2041
2101
2161
2221
2281
2341
2401
2461
2521
2581
2641
2701
2761
2821
2881
2941
3001
3061
3121
3181
3241
3301
3361
3421
3481
3541
3601
3661
3721
3781
3841
3901
3961
4021
4081
4141
4201
4261
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4381
4441
4501
4561
4621
4681
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4801
4861
4921
4981
5041
5101
5161
5221
5281
5341
5401
5461
5521
5581
5641
5701
5761
5821
5881
5941
6001
6061
6121
6181ATGGAAGTAATGCAATTATTGGCTATGTTTCGTGGAACAATTCCAAAAGATGGAGAGAAA
ATGGACCTATTTCTTCGCTATCAGGCGCAACATTTTGATGAGAAATGGCAGGACTTGGTA
GAGAGTTTTTTGACTGAAGAGGGCAAGATAGAAGAGATGCCTCGTGTCTATTCTTTTGAT
CAAGATATTGTTTCTTTCCTAGAGGCTAGTTCTGAAAATAATGACCAAGATTTAGAAAGT
TACACAAGAACTTTTGGACAAGCGGGTCTAGATAAATTATCTCAATTAAGCAATTGGGAG
AAAAACTTGGTTCTAGAAGTCGCAACCTATAACCTTTTCACTCGATTTTACAACCAATCT
GAAAAAGAGAAGCTAACACCATTAAGTGAGCTTGTATGTCATCAGAATCAGGAAGTTAAT
TTAGTCAACGTCTATCGAGTTGCGAATAATCTATCTGACCGTATTAGTAGAGATATAGAG
GAATTTCTTCTAATGGTTGATTCCAAAGAACTAGAAAAAGAGGTTCTTGAGATTCATTTT
GAAGAAAAAGAGGGAGATGTTCTAGCCTATTTGGGTTCTGAATTAGTGGCTACTTTAGAT
ACCGTTACGGATCTTGTCCATCATGAAGAAAACTACCAACAACTCCCACTGACACAAAAG
TTGAAGATTATTACTCATTTTGATGATGTAAAAGCTAGAAGCGAAAAGTCTAAGCAAGTA
GAGGAATCCTTATCTCCTTCAACTGATATTGAACAGGAAATGGAAAAAACTAACTCCTTT
TCTAATGTCGATAAAATTGTAGAAGAAGCTTTGAGGGAATATCCAATCGGTTCACAAGTA
AGTTATAAAGGACAAGTATTTCAGTTGGTTTCGATTGAAAATGCACACTTAAATGACTTA
GTTCGCCTAGAGTTATTCAATAATTCCAACCAGTTATTTGAAGAGAATCCTATCTTATAC
TTGAGCAGTTTGGAAGAGATTGAACAAGTATTGTCTCATGTAGAACTTGAAAAAGAAGGT
TCAGAGATTGAGATTGATTCATCAAGTGAAAGTCAGGAAATAGATTTGTTTTCCTATCTG
GATGAAGAAAATGAAAAGGAAAAAGATAAGGATAAGGAAACAAAACATTTAATTTCAGGT
ATAGAAGAGACGGATGTCCCTGTTCAAGATTTTGTTTTTCCAGATGATTTAGAGGACTTT
TATCCTAAGACAAATCGAGAAAAAATTGAAACGAATATCGCCGCAATTGAACTTGTTAAA
AGATTAGAAAAAGAGGGACAACAAGCAAGTCCAGAAGAACAAGAACTAATAGCCAAGTAT
GTCGGCTGGGGTGGTCTTGCTAATGAATTTTTTGATGAACTCAATCCAAAGTATGAGGCA
GAACGTTTAACTCTTAAGAGCTTAGTAAGTAAATCAGAATACTCTACCATGAAACAAAGT
TCTCTCACAGCCTATTATACAGACCCAATGATTATTCGCCAGATTTGGCAAAAATTACTG
GATGATGGTTTTGAGGGAGGAAGGATATTAGATCCTTCTATGGGAACTGGGAACTTCTTT
GCGGCGATGCCTAGAAGTATACGAGCTAAATCAGAACTCTATGGGGTTGAATTAGACAGT
GTGACAGGCGCAATCGCAAAACAACTCCACCCCAATACCCATATTGAAGTGCGAGGATTT
GAAGAAGTGCCCTATCAAAATAATAGTTTTGATTTAGTCTTAACGAATGTTCCGTTTGGA
AATTTTCGCATTGCCGATAAAAACTATGATAAACCTTATATGATTCATGATTACTTTGTC
AAACACTCACTTGATTTAGTAAGAGATGGAGGACAAGTTTCGATTATCTCTTCTATTGGC
ACAATGGATAAACGGACAGATAATGTCTTACAAGAGATTAAATCCAACACTCATTTTTTA
GGGGGAGTTCGTTTGCCGGATACGGCTTTTAAAAGGATTGCAGGTACTCGAGTGACCACA
GACCTCCTCTTCTTTCAAAAGGATCAAGCAAAGAATCTTAATGAAGATGAGCTTGTCTTT
AGTGGCTCTATTCCCTTTGAGGAGGATAAGCGTGTCTGGATCAATCCTTATTTTGATGGG
AAATACAATACACAAGTTTTGGGTGAATATGAGGTACGTAATTTTAATGGAGGAACTCTC
AATGTTAAGGGGGGTTCAGAAACATTATCTACTGACATAATGAAAGCATTAGAGAATGTG
GAAGCACCTAAACAAATTGACAATTCTTTGAAAGCACCTGTTTTTATCCAAGAAGAAGTG
GATAATTCTATCCCAAGTCATATACGTGAGGACTTAGCGCTCTATTCTTTTGGATATGAG
GGAAATCAAATTTATTACCGAGATACGCATGGTATTCGAAAAAGTTCAAAAGTAGACGAA
ATTAGTTATTATGTAGACGAGAAGGGAGATTTTAAAACCTGGGACAGTTCTTTGTCTGAA
CATAAAATAGATCGATTCGTACAACTTCATTTGACAGATGAGGAAGCACTAGATGTTTAC
AAGTCAGAAGAAGCGAGTAAAAGAGGGAAATATAAGGGCTTGTTCAAAAAAACTGTATTT
TATGAAAGCCCCTTATCGGATAAGGATATTAGTCGTATTAAGGGCATGGTTGATTTGAGA
GAGACCTATCAAGCCTTAATTGAAATTCAACGCCATCCAGATTATAGTCGAACAGATTTT
CAGGTATTACTTAGTAAACTCAATCATGACTATGACCGCTTTGTAAGTCAATTTGGATAC
TTGAATGCCTCCGTTAATCGGAACTTATTTGATAGTGACGATAAGTATTCTTTACTAGCA
AGTTTAGAAGATGAATACATTGATTCTAAAGATCAGAAAGTAAAATATAAAAAATCTTTA
GCCTTTGAGAAAGCATTGGTTAGGCCAGAGAGAGTGATTGCAAGAGTTTCAACGGCTCTA
GATGCCTTAAACTCTAGTTTATCGGATGGTAGAGGGGTTGATTTAGATTATATGGTATCA
ATTTATCCCGAACATAGCCAAGCTGCTATTTTAGATGAGTTAGGTGACCAGATTTTAATA
GATCCAGAAAGCTATTTAAGAGGGGAAAGAAAATATCTTTCTAAGAACCAGTTTTTATCA
GGAGACATTCTCAATAAGATAGAAGTAGTTCAACTGTTAGTAGAGGAAAACAATCAAGAA
TGTGACTGGTCCCATGCTTTAGATTTGTTAGAATCTGTTCGCCCTCCAAGGATTCATCTG
GCAGATATTGAGTTCAAAATAGGGTCACGTTGGATTCCTCAATCCGTTTATGGTAAATTT
GCCTTTGAATGTTTTACCAATCGTGAATTTGAATTGTCTTCGCCTGATGTTGAACAAGTC
ATTGAAGTGAATCCTGTCGATGGCCAGGTTCATTTAAGGACATCATTTGCTTATCGCTAT
CCAAGTGCCAAAGATAGTAGTCTTGGAGTTAGTGGGTCACGTTATGATACAGGAAGAAAG
ATTTTTGAGAATTTACTTAATTCGAACCAACCGACGATTACCATGACTGTTACGGAAGGA
GAAAAGAAAAAGACCATCACAGATTTGGAAAAAACCTCTGTTCTAAGAGCAAAAGAGCAG
CATTTACAAGAACTCTTTCAAGACTTTGTCTCACGGTATCCAGACGTCCAACAAGTCATT
GAAGAAAGTTACAATCGTCTTTATAATCGAACGGTTAGTCGAGAGTATGACGGTAGCCAT
TTAGTCATTGATGGCTTGGCTCAAAACATTAGTCTTCGTCCTCACCAAGAGAATGCCATT
CAAAGAATCGTAGAAGAAAAAAGAGCCTTGTTAGCTCATGAGGTAGGTTCAGGAAAGACC
TTGACCATGCTTGGTGCTGGGTTTAAATTAAAGGAGTTGGGGATGGTTCATAAGCCCTTG
TATGTAGTGCCCTCTAGTTTGTCTGCTCAATTTGGTCAAGAAATCATGAAATTTTTCCCT
ACTAAAAAGGTCTTTGTGATCACTAAGAAAGATTTTGTGAAGGCGAGAAGAAAACAATTT
GTGTCACGTATTATTACAGGAGATTACGATGCCATTGTCATTGGGGATTCTCAATTTGAA
AAAATCCCTGTCAGTAAAGAAAGACAGATGAATTATATCGAGGATAAACTCAATGAACTA
CGAGAGATTAAAACACATTCTGAAAATAAGTATACTGTCAAAGAAGCAGAACAATCAATA
AGTGGTCTAGAGAAACAATTGGAAGAACTCCAACGCTTTAATCGTGATAGTTTTATTGAT
TTTGAGAACTTAGGAATTGATTTTCTCTTTGTGGATGAAGCACATCACTTTAAAAATATT
CGTCCAATTACTGGACTTGGAAATGTAGCAGGGATTACCAATACAACCTCTAAGAAGAAC
GTGGATATGGAAATGAAGGTTCGACAGATTCAGGAAGAACATGATTTTAAAAATATTGTC
TTTGCGACAGGAACACCTGTTTCCAATTCTATTAGTGAGTTATATACTATGATGAACTAT
ATTCAACCAGATATCTTAAAACGCTATCAAGTTGATTATTTTGACTCTTGGGTAGGTGTT
TTGGAGAAATTCAAAACTCTATGGAATTAGCTCCTACAGGGGATAAGTACCAACCTAAGA
AACGATTTAAAAAGTTTGTCAATCTACCTGAGTTGATGAAAATCTATAAAGAAACAGCCG
ACATTCAAACACAAGATATGTTGGATTTACCTGTTCCAGAAGCTCATATTATCCCTATTG
AGAGTGAGTTAACTGAAAACCAGAAACTCTATTTAGAAGAATTGGTTATGCGTTCAGATG
CGGTCAAATGTGGGACAGTTGATCCGAGTCAGGATAACATGTTAAAAATTACGGGTGAGG
CACGAAAACTAGCAATTGATATGCGTTTATTGGACTCTAGTTATAGTCTAGCAGACAATC
ATAAACTGCTTCAGGTAGTGGATAATGTTGAAAGAATTTATCGTGAAGGAATGGAAAATA
AGGCTACTCAGATGATTTTTTCAGATATTGGCACACCTAAGAAAAAGGACAATGGCTTTG
ATGTTTATTCTGAGATTAAGGCTTTATTAGTTGATAGAGGAATCCCTAGTAAGGAAATTG
CCTTTGTACATGATGCCAATAGTGATGAAAAGAAGAATAGTTTGTCTCGAAAGGTCAATG
CAGGAGAGGTTCGGATTCTCCTTGCCTCAACTGAAAAAGGAGGAACAGGTTTAAATGTTC
AGAGCAAGATGAAAGCAGTTCATCACCTGGATGTCCCTTGGAGACCAAGTGACATTCAGC
AACGCAATGGACGGATTATCCGACAGGGAAATGAAAACAAGGAAGTGGATATTTACCACT
ATATTACCAAAGGTTCGTTTGATAATTATCTATGGGCAACTCAGGAGAACAAACTCCGTT
ATATTAAGCAGATTATGACTTCTAAGGAGCCGATTCGTGCTGCAGAAGACATTGATGAGC
AGACCATGACAGCTTCTGATTTTAAGGCACTAGCAACTGGGAATCCTTATCTCAAATATA
AGATGGAATTAGAGAATGATCTAACTCTATTAGAAAATCAAAGACGCGCCTTTCAACGCA
GCAAGGATCACTATCGTCATACAATCTCTTACTGTGAAGAAAATATGCCCATTCTTGAGA
AACGATTAAGCAAGTATGAAGGCGACATTCAACAGTCTGAAATGTCGAAAGACCAGGCAT
TTTCTATGACAGTAGGCAAACAAGCTTTTGAGCAACGAGCTGAAGCAGGGGAATCCCTAC
ACCGTCTTATCCGTCATAATCAAGCTGACAGCAAAGAATTTCGTACCTTAGCAAGCTATC
GAGGATTTGATATTAAAATGCTTAGTCTTCCAACAAATCAACCTCTTCCTGAAACCTTCT
CTGTTAAGATTGTAGGAGAAAATCAGTATTCTGTCAGTTTAGATTTGTATTCTCCTTTGG
GGACAATTCAAAGACTTCAGCATACGATTGATCACATTAAAGAGGACCAAGTGAAAACTC
AGAACTTATTGGATGAATTAAAGGATAAATGGACTACTGCTAAGGTAGAAATTGAGAAAA
ACTTTCCAAAGGAAGAGGATTATCAAACAAAAAAGGCCGAATACGATGTACTTGCGCCAT
TGATTGAAACAGAAACGGATTTAGATATTATTGATCAGGCATTAAGGCAATTCCACGAAA
AAGGAAACGAAAAGCAGGAACAACTTTCTTTTGAATTGGATTAA60
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6224
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPH_1251 [new locus tag: SPH_RS06055 ]
- symbol: SPH_1251
- description:
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED:
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- DeepLocPro:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq:
- UniProt:
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]