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NCBI: 31-JAN-2014

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae JJA
  • locus tag: SPJ_0658 [new locus tag: SPJ_RS03290 ]
  • pan locus tag?: PNEUPAN001640000
  • symbol: thiE1
  • pan gene symbol?: thiE-1
  • synonym: thiE
  • product: thiamine-phosphate pyrophosphorylase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPJ_0658 [new locus tag: SPJ_RS03290 ]
  • symbol: thiE1
  • product: thiamine-phosphate pyrophosphorylase
  • replicon: chromosome
  • strand: +
  • coordinates: 638734..639363
  • length: 630
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    ATGTTTCATAAAGAATTACTAAAACTATATTTTATTTGTGGAACGACTACTTGCCAAGGA
    AAAAATCTATATACAGTCGTTGAGGAAGCCTTAAAAGGTGGTATAACCTTATTTCAATTT
    CGAGAAAAAGGTGAGGGTGCTTTAGAAGGCTTAGAAAAACTTGAGCTAGCTATCCAAATT
    AAAGAACTTTGTAAAAAATACAATGTTCCATTTATCGTTAATGACGATATAGATTTAGCA
    ATGGAAATTGACGCCGATGGCGTACATGTAGGTCAAGATGATATTGGTGTTGATGAAATT
    AGAAAATTGATGCCAGATAAAATAATTGGTCTTTCTATAAGAAACGAAGAAGAATTTCAA
    CAATCAAAAGTTGAATATGTAGATTATGTAGGTGTTGGGCCTGTATTTGATACCCAGTCA
    AAAGATGATGCTGGTGGTGCTATAGGTTATGAAGGTCTTGAATTGATGAGAAAACTATTG
    CCACAAATGCCTTTAGTTGCAATTGGTGGGATACAGACGAAACATATTAAAGACATTATA
    AAGACCAATATGGATGGCGTTTCAATCATTTCGGCAATATCGTATGCAAAAAATATAGAA
    AAAACTGTTCGGGAAATGAGTGAACAATAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    630

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPJ_0658 [new locus tag: SPJ_RS03290 ]
  • symbol: ThiE1
  • description: thiamine-phosphate pyrophosphorylase
  • length: 209
  • theoretical pI: 4.5534
  • theoretical MW: 23303.8
  • GRAVY: -0.139234

⊟Function[edit | edit source]

  • reaction:
    EC 2.5.1.3?  ExPASy
    Thiamine phosphate synthase 4-amino-2-methyl-5-diphosphomethylpyrimidine + 2-((2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene)ethyl phosphate = diphosphate + thiamine phosphate + CO2 4-amino-2-methyl-5-diphosphomethylpyrimidine + 2-(2-carboxy-4-methylthiazol-5-yl)ethyl phosphate = diphosphate + thiamine phosphate + CO2 4-amino-2-methyl-5-diphosphomethylpyrimidine + 4-methyl-5-(2-phosphono-oxyethyl)thiazole = diphosphate + thiamine phosphate
  • TIGRFAM:
    Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Thiamine thiamine-phosphate diphosphorylase (TIGR00693; EC 2.5.1.3; HMM-score: 220)
    and 1 more
    3-hexulose-6-phosphate synthase (TIGR03128; EC 4.1.2.43; HMM-score: 19.8)
  • TheSEED  :
    • Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
    Cofactors, Vitamins, Prosthetic Groups, Pigments Cofactors, Vitamins, Prosthetic Groups, Pigments - no subcategory Thiamin biosynthesis  Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
  • PFAM:
    TIM_barrel (CL0036) TMP-TENI; Thiamine monophosphate synthase (PF02581; HMM-score: 205.2)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9809
    • Cytoplasmic Membrane Score: 0.0153
    • Cell wall & surface Score: 0.0008
    • Extracellular Score: 0.003
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.0206
    • TAT(Tat/SPI): 0.000889
    • LIPO(Sec/SPII): 0.194543
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MFHKELLKLYFICGTTTCQGKNLYTVVEEALKGGITLFQFREKGEGALEGLEKLELAIQIKELCKKYNVPFIVNDDIDLAMEIDADGVHVGQDDIGVDEIRKLMPDKIIGLSIRNEEEFQQSKVEYVDYVGVGPVFDTQSKDDAGGAIGYEGLELMRKLLPQMPLVAIGGIQTKHIKDIIKTNMDGVSIISAISYAKNIEKTVREMSEQ

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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