PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

NCBI: 13-DEC-2020

⊟Summary

• organism: Streptococcus pneumoniae SPN032672
• locus tag: SPN032672_RS10655
• pan locus tag^?: PNEUPAN002673000
• symbol: SPN032672_RS10655
• pan gene symbol^?: —
• synonym:
• product: hypothetical protein

⊟Genome View

⊟Gene

⊟General

• type: CDS
• locus tag: SPN032672_RS10655
• symbol: SPN032672_RS10655
• product: hypothetical protein
• replicon: chromosome
• strand: +
• coordinates: 2000972..2001295
• length: 324
• essential: unknown

⊟Accession numbers

• Location: NC_021003 (2000972..2001295) NCBI
• BioCyc:
• MicrobesOnline:
• PneumoBrowse for strain D39V:

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  
  ATGACTAACTCTGTATTTTCGACAATGCAAGATATTGAGAATGTTGCAACCGATATTATA
  AAATCATATGATAATGAGATTTATACTTATAAAGCTGTTTCCCAAGAAGAATTGGAAAAA
  CTAGAAAAAAGTTATGATGAAAAAAGTCACGAAGAATTAGTTTCAATAGAAAGCAATTTA
  GAAATGAAACAACAGAACCTTATTGATGAGGTTAATAAAACAATCAAGGAAAATTATGAA
  AAGATTCAGTATATTTCATCAAGTAGGAGAGGAGAATTTGTAGAAAAAATTATTGGTAGG
  GTGGTAGAAAAATATGGCTATTAG
  60
  120
  180
  240
  300
  324
  

⊟Protein

⊟General

• locus tag: SPN032672_RS10655
• symbol: SPN032672_RS10655
• description: hypothetical protein
• length: 107
• theoretical pI: 4.40051
• theoretical MW: 12617
• GRAVY: -0.799065

⊟Function

• TIGRFAM:
  two transmembrane protein (TIGR04527; HMM-score: 14.1)
• TheSEED: data available for Hungary19A-6, TIGR4
• PFAM:
  no clan defined HSCB_C; HSCB C-terminal oligomerisation domain (PF07743; HMM-score: 16.4)
  DUF3106; Protein of unknown function (DUF3106) (PF11304; HMM-score: 13.5)
  and 5 more
  MACRO (CL0223) DUF2362; Uncharacterised conserved protein (DUF2362) (PF10154; HMM-score: 13)
  no clan defined DUF3638; Protein of unknown function (DUF3638) (PF12340; HMM-score: 12.9)
  Z1; Z1 domain (PF10593; HMM-score: 12.5)
  TMPIT; TMPIT-like protein (PF07851; HMM-score: 11.2)
  TPR (CL0020) Insc_C; Protein inscuteable C-terminal (PF19427; HMM-score: 10.1)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: Cytoplasmic
  • Cytoplasmic Score: 7.5
  • Cytoplasmic Membrane Score: 1.15
  • Cellwall Score: 0.62
  • Extracellular Score: 0.73
  • Internal Helices: 0
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.003332
  • TAT(Tat/SPI): 0.000242
  • LIPO(Sec/SPII): 0.000466
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI:
• RefSeq: WP_000185367 NCBI
• UniProt:

⊟Protein sequence

• MTNSVFSTMQDIENVATDIIKSYDNEIYTYKAVSQEELEKLEKSYDEKSHEELVSIESNLEMKQQNLIDEVNKTIKENYEKIQYISSSRRGEFVEKIIGRVVEKYGY

⊟Experimental data

• protein localization:
• interaction partners:

⊟Expression & Regulation

⊟Operon

⊟Regulation

• regulator:

⊟Expression data

• PneumoExpress for strain D39V:

⊟Biological Material

⊟Mutants

⊟Expression vector

⊟lacZ fusion

⊟GFP fusion

⊟two-hybrid system

⊟FLAG-tag construct

⊟Antibody

⊟Other Information

You are kindly invited to share additional interesting facts.

⊟Literature

⊟References

⊟Relevant publications