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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 10-APR-2025

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae SPN034156
  • locus tag: SPN034156_RS06290 [old locus tag: SPN034156_11180 ]
  • pan locus tag?: PNEUPAN000462000
  • symbol: SPN034156_RS06290
  • pan gene symbol?: smc_1
  • synonym:
  • product: phage tail tape measure protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS, pseudogene
  • locus tag: SPN034156_RS06290 [old locus tag: SPN034156_11180 ]
  • symbol: SPN034156_RS06290
  • product: phage tail tape measure protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1152195..1155291
  • length: 3097
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_021006 (1152195..1155291) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V:

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    1681
    1741
    1801
    1861
    1921
    1981
    2041
    2101
    2161
    2221
    2281
    2341
    2401
    2461
    2521
    2581
    2641
    2701
    2761
    2821
    2881
    2941
    3001
    3061
    ATGGCAGGAAATATCAAAGGTATCAAAATTGAAATCGATGGCGACACGCAACCCTTGCAG
    AAGGCGTTAAAAGCTATTAATAAAGAGTCTGTTAATACTACAAATGAACTAAAACAAATT
    GATAAGGCTTTAAAGTTTGACACTGGGAACGTTATTTTACTAACCCAAAAACAAGAAGTC
    TTACAGAAACAAATAGGTATAACCAGAGACAAACTAGAAACTTTAAGACAAGCCCAATCT
    AAAGTAGATGAGGAATTTAAAAAGGGGAATATTGGTTCTGAACAGTATCGCGCTTTCCAG
    CGTGAAGTAGAAGTGACTCAAAATGTCCTAAAAGGATATGAGGGAAAGCTTGCCAGTCTC
    ACTCAAGCTCTTGAAGGAAATGGTGATGCAGCCAAGAACAATCAAGCTCAACTAAAAGAA
    TTGCAGAATGAACAAAAATTGCTTGCTAGTGAATCTGAAAAAGTAGTTAGTTCATTTAAA
    CTGCAAGAAAGCCAGATGGGTGCCAATGCTAGCGAAGCAGACAAGTTAGCATTAGCCGAA
    AAAAAGATTGGCGCACAGTCTGAAATCGTCACTCGTCAAATCGAAAACCTTGAGAAGCAG
    TTAAGCCTAACTAAAGAACAGTATGGCGAAAACTCAGCCGAAGCTAACAAGATGGAAGCA
    GAGCTAAATCAAGCTAAGACCGCTTACGCTAATCTTAATCAGGAATTAGGAAAACTTGGT
    AGTACAGCTAAGAGCAACCAAACGCAACTGAAAGAATTGCAGAATGAGCAGAGTCAACTT
    GCTTCAGAGATGAGTAAGGTGACAAGTTCATTCAAACTGCAAGAAAGTGCTTTGGGTTCA
    AATGCTAGTGAAGCCGAGAGAAATGCTCTTGCCCAGAAAAAGATTGGTGCCCAGTCTGAG
    ATTGTAAGTAAACAGATTTCAAATCTAGAACAGCAATTGGAAATCACTAAAAAAGAATTT
    GGTGAGAACTCCACACAAGCCAACAAGATGGAATCTGAGCTAAATCAGGCTAAGACTGCT
    TTTAATCATCTCAATGATGAGATGAAGGGAACAAAGTCTGCTGCTGATAGCACTCAAGAA
    AGTTTAAGTGAAATCTCAAGAAATTTAAGAGCAGAACTACTTCAACAGTTTAGTGAGAAG
    TTGAGTGCTATTTCAGAAAAGCTTGTGGAAGTAGGAAAAGAAGCGTTAGAAGCAGCTGCT
    CAAATGCAAGCTAGTAATGCTCAATTTACTACCGTTTTCGGAGATATGGAAACCCAAGCA
    AGAGAAGCGTTGAATGCTATTGGTCAGGAAATGGATATTGTCCCAGAGCGTTTACAAGGG
    TCATTTACTCAGATGGCTTCATTTGCAAAGACTTCAGGATTGGATACAGCAGAAGCTTTG
    GATCTTACTTCTCGTGCAACTAGGGCAGCAGCAGACGGTGCAGCCTTCTATGACAAATCT
    ATTGAGAGCGTGACAGAGAGCTTACAATCTTTTTTGAAGGGAAACTTTGCTAACGATGCG
    GCTCTTGGCATTTCTGCAACAGAAACGACCAGGAATGCCGCTGCAAATAAATTGTACGGA
    AAGTCATTCAAGGACTTGAGCGAAGCGCAGAAGCAATTGACCTTGCTTCAGATGGTCGAA
    GACGGAAATAAACTCTCAGGAGCTCTTGGACAGGCTGCAAGAGAATCAGACGGCCTAGAA
    AACGTGATGGGGAATCTGAAACAAGCTGGGACCAATGCATTATCTGCTATTGGTCAACCT
    CTTCTAGAAATGATGATTCCTGTTTTTTCAAACCTTGGCAACGATTGTGAAAGGTGTAGC
    TGAGCTGTTCAGTTCCTTACCTGCTCCAGTAAAAGATTTTGTTGTTATTTTAGGAACAGT
    TGTGACTGCTGTAGGGGTCATAGCCCCCATATTCTTATCGTTGCAAGCCCTTGCTGAGTT
    TTTAAAAATATCTATTGGAGAAATGATAATTGCCGCATTGCCAATTATTGGAACAGCTAT
    TGCAATTGCTGCTGCAGTTGCTGCAATTGTTGCTATTGTGAAATATCTCTGGGAAACTAA
    CGAAGGTTTTCGAGATGCGGTCACGACCGTTTGGAATGCGATTCTTGAAGTTATCAATGC
    AGTCGTATCAGAGATTTCTAATTTTGTCATGAGTATCTTTGGAACGGTTGTTACTTGGTG
    GACGGAGAACCAGGAACTTATCAGGACAAGTGCTGAGACTGTCTGGAATGCCATTTATAC
    GGTCATCAGTACAATACTGGATATACTTGGCCCCTTGCTCCAAGCTGGCTGGGATAACAT
    TCAACTGATCATTACAACAACTTGGGAAATCATCAAGATCGTTGTTGAGACTGCAATCAA
    TGTTGTCCTTGGTGTTATCCAAGCAGTTATGCAGATCATTACTGGTGATTGGTCAGGAGC
    TTGGGAAACTATCAAGGGAGTGTTTTCTACTGTATGGCAAGCTATTCAAAGCATTGTTCA
    GACTATTTTCTCAGCTATCCAGAGTTATATTTCAAATATTCTCAACGGCATTTCAGGAAC
    TGTATCAAATATCTGGAACAGCATCAAGGACACTGTCTCAAATGTGTTAAATGCTATATC
    TAGTACTGTATCAAGTGTTTGGGAAGGTATCAAGAGTACCATTTCAAGTGCTATCAATGG
    TGCAAGGGATGCTGTTTCTTCAGCTATTGAAGCCATCAAAGGATTGTTTAACTTCAACAT
    CAGCTGGCCACATATCCCACTACCTCACTTTTACGTGAGTGGTTCGGCCAATCCATTAGA
    TTGGTTGAGTCAAGGTGTTCCAAGTATTGGAATCGAATGGTATGCCAAAGGCGGTATCAT
    GACGAAACCAACTATCTTTGGAATGAATGGTAATAACATAATGGTTGGTGGTGAAGCTGG
    GAATGAAGCAGTATTGCCACTTAACGACAAAACGCTTGGAGCCATCGGTCGAGGTATCGC
    TCAAACTATGGGTGGAACTTCACCAACCATTAACATTACCATTACTGGCAACACTGTCAG
    AGAAGAAGCCGACATCAGTCGTATTGCTGATGAGGTGGCTCAGCGTATTGCTGACGAGTT
    GCAACGTAAGACACAATTGAGAGGAGGGTTTACATGA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
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    960
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    1320
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    1560
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    2040
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    2160
    2220
    2280
    2340
    2400
    2460
    2520
    2580
    2640
    2700
    2760
    2820
    2880
    2940
    3000
    3060
    3097

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPN034156_RS06290 [old locus tag: SPN034156_11180 ]
  • symbol: SPN034156_RS06290
  • description: phage tail tape measure protein
  • length:
  • theoretical pI:
  • theoretical MW:
  • GRAVY:

⊟Function[edit | edit source]

  • TIGRFAM:
  • TheSEED:
  • PFAM:

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb:
  • DeepLocPro:
  • SignalP:
  • predicted transmembrane helices (TMHMM):

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq:
  • UniProt:

⊟Protein sequence[edit | edit source]

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

  • PneumoExpress for strain D39V:

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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