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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 26-AUG-2017
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae SPN034183
- locus tag: SPN034183_08730 [new locus tag: SPN034183_RS04760 ]
- pan locus tag?: PNEUPAN001971000
- symbol: rpmG2
- pan gene symbol?: rpmG1
- synonym: rpmG
- product: 50S ribosomal protein L33
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPN034183_08730 [new locus tag: SPN034183_RS04760 ]
- symbol: rpmG2
- product: 50S ribosomal protein L33
- replicon: chromosome
- strand: +
- coordinates: 885232..885381
- length: 150
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: FQ312043 (885232..885381) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_2259 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121GTGCGAGTAAAAATTAATCTCAAATGCTCCTCTTGTGGCAGTATCAATTACCTAACCAGT
AAAAATTCAAAAACCCATCCAGACAAGATTGAGGTTTTAAAGTATTGTCCCAAGGAAAGA
AAAGTAACCCTACATCTTGAATCTAAGTAG60
120
150
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPN034183_08730 [new locus tag: SPN034183_RS04760 ]
- symbol: RpmG2
- description: 50S ribosomal protein L33
- length: 49
- theoretical pI: 10.2321
- theoretical MW: 5649.67
- GRAVY: -0.685714
⊟Function[edit | edit source]
- TIGRFAM: Protein synthesis Ribosomal proteins: synthesis and modification ribosomal protein bL33 (TIGR01023; HMM-score: 64.4)
- TheSEED :
- LSU ribosomal protein L33p
- LSU ribosomal protein L33p, zinc-independent
- PFAM: Zn_Beta_Ribbon (CL0167) Ribosomal_L33; Ribosomal protein L33 (PF00471; HMM-score: 62.8)and 2 moreMu-like_Com; Mu-like prophage protein Com (PF10122; HMM-score: 12.5)Defensin (CL0075) Meleagrin; Meleagrin/Cygnin family (PF08189; HMM-score: 12)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.67
- Cytoplasmic Membrane Score: 0.01
- Cellwall Score: 0.15
- Extracellular Score: 0.17
- Internal Helices: 0
- DeepLocPro: Extracellular
- Cytoplasmic Score: 0.4518
- Cytoplasmic Membrane Score: 0
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.5481
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.107876
- TAT(Tat/SPI): 0.0019
- LIPO(Sec/SPII): 0.040446
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: CCP32583 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MRVKINLKCSSCGSINYLTSKNSKTHPDKIEVLKYCPKERKVTLHLESK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_2259 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]