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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 06-FEB-2015
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae ATCC 700669
- locus tag: SPN23F10470 [new locus tag: SPN23F_RS05335 ]
- pan locus tag?: PNEUPAN002275000
- symbol: SPN23F10470
- pan gene symbol?: glxK
- synonym:
- product: putative glycerate kinase-family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPN23F10470 [new locus tag: SPN23F_RS05335 ]
- symbol: SPN23F10470
- product: putative glycerate kinase-family protein
- replicon: chromosome
- strand: +
- coordinates: 1010677..1011480
- length: 804
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: FM211187 (1010677..1011480) NCBI
- BioCyc: see SPN23F_RS05335
- MicrobesOnline: 5830905 MicrobesOnline
- PneumoBrowse for strain D39V: SPV_1011 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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781ATGAAGATTGTAATTGCACCGGATTCGTTTAAGGAAAGCTTGACAGCTCAACAGGTAGCT
GAAGCAATAAAAAGAGGCTTCCAACAATCGATAGCAGATGTAGAATGTCTCCTCTGCCCT
GTTGGTGATGGGGGAGAAGGTACTGTAGATGCTATCCGACATTCTCTTGACCTAAAAGAA
AAATGGATCCAAGTGACAGACCCTTTTGGACAAAAAGAAGCCATGCGCTATTTTCAAAAA
GGGGAACTGGCACTATTTGAAGTAGCTGACTTGGTTGGTCTTGGAAAAATTCCGCTAGAG
AAACGAAATCCACTTCAAATCCAAACTTGTGGTATTGGAGAGTTGATTCTCCATCTCATT
TCTAAAGGGATTAAAGATATTTATATCGGTGTTGGTGGCACGGCCAGTAATGATGGAGGA
CTGGGGATTGCTGCTGGTTTGTGTGCCTTTGCTCAGGCAAGTATCGTGTCTGGAATTGAT
ACCTGCTTGGACTTAATCAACTTTGATAAGAAAGTTTCAGATGCTGACTTGGTTGTTGTT
GGAGAAGGAAGACTTGATAGTCAAAGCTTTGCTGGGAAAGCGCCTATAGGTGTTGCAAAA
AGAACCCCTGTTGGAGTTCCTGTTATTGCTATTTGCGGTAGTCTTGCTGAAGATTTACCT
CCCCTACCATTTGAAAATATCCAAGCTGTCTTTTCTATTTTGGAGAAAAGTGAACCTTTA
GAAGATAGTTTGAAAAATGCCAGTCTCTATCTGGAGCGCACGGCTGCCAATATTGGGCAC
TTATTAAATATGTGCAAGATTTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPN23F10470 [new locus tag: SPN23F_RS05335 ]
- symbol: SPN23F10470
- description: putative glycerate kinase-family protein
- length: 267
- theoretical pI: 4.67916
- theoretical MW: 28372.7
- GRAVY: 0.196629
⊟Function[edit | edit source]
- TIGRFAM: Energy metabolism Other glycerate kinase (TIGR00045; EC 2.7.1.31; HMM-score: 332.3)
- TheSEED :
- Glycerate kinase (EC 2.7.1.31)
Amino Acids and Derivatives Alanine, serine, and glycine Glycine and Serine Utilization Glycerate kinase (EC 2.7.1.31)and 5 moreCarbohydrates Monosaccharides D-galactarate, D-glucarate and D-glycerate catabolism Glycerate kinase (EC 2.7.1.31) - PFAM: no clan defined Gly_kinase; Glycerate kinase family (PF02595; HMM-score: 261.9)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.010317
- TAT(Tat/SPI): 0.001245
- LIPO(Sec/SPII): 0.001237
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: CAR68865 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKIVIAPDSFKESLTAQQVAEAIKRGFQQSIADVECLLCPVGDGGEGTVDAIRHSLDLKEKWIQVTDPFGQKEAMRYFQKGELALFEVADLVGLGKIPLEKRNPLQIQTCGIGELILHLISKGIKDIYIGVGGTASNDGGLGIAAGLCAFAQASIVSGIDTCLDLINFDKKVSDADLVVVGEGRLDSQSFAGKAPIGVAKRTPVGVPVIAICGSLAEDLPPLPFENIQAVFSILEKSEPLEDSLKNASLYLERTAANIGHLLNMCKI
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: glgB > glgC > SPN23F10430 > glgA > SPN23F10460 > SPN23F10470
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1011 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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