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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 11-FEB-2025

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae ATCC 700669
  • locus tag: SPN23F_RS05965 [old locus tags: SPN23F11770 SPN23F_11770 ]
  • pan locus tag?: PNEUPAN002535000
  • symbol: SPN23F_RS05965
  • pan gene symbol?: ABC-NBD_12
  • synonym:
  • product: ATP-binding cassette domain-containing protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPN23F_RS05965 [old locus tags: SPN23F11770 SPN23F_11770 ]
  • symbol: SPN23F_RS05965
  • product: ATP-binding cassette domain-containing protein
  • replicon: chromosome
  • strand: +
  • coordinates: 1152962..1154521
  • length: 1560
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGCACTATCGACATTCTAGAAAGGGCAATAGTATGATAAAAATCAATCACCTGACCATC
    ACACAAAACAAAGATTTACGAGACCTTGTCTCTGACCTAAGCATGACCATACAAGACGGG
    GAAAAGGTAGCTATTATTGGCGAAGAAGGAAATGGTAAATCAACCTTACTTAAAACTTTA
    ATGGGGGAAGATTTGTCTGATTTCACTATCAAGGGAGACATCCAATCTGACTATCAGTCA
    CTGGCCTACATTCCTCAAAAACTTCCCGAGGAGCTGAAAAAGAAAACTTTACACGACTAC
    TTCTTTTTAGATTCTATTGATTTAGACTACAGTATCCTCTATCGTTTGGCGGAGGAATTG
    CATTTTGATAGCAATCGTTTCGCAAGTGACCAAGAGATTGGCAATCTATCAGGGGGAGAA
    GCTTTGAAAATTCAGCTTATCCATGAGTTAGCCAAACCCTTTGAGATTCTATTTTTAGAT
    GAACCTTCAAATGACCTAGACCTTGAGACAGTTGATTGGCTAAAAGGCCAGATTCAAAAG
    ACCAGGCAAACCGTTATTTTCATTTCCCATGATGAAGACTTTCTTTCTGAAACGGCAGAC
    ACTATTGTTCACTTGCGACTGGTCAAACACCGTAAAGAAGCGGAAACGCTAGTAGAGCAT
    TTAGACTATGATAGCTATAGTGAGCAGAGAAAGGCTAATTTTGCCAAACAAAGTCAGCAA
    GCTGCTAACAACCAAAGAGCCTACGATAAAACCATGGAAAAACATCGGAGAGTTAAGCAA
    AATGTAGAAACTGCGCTTCGAGCTACCAAAGATAGTACTGCCGGTCGCCTATTGGCTAAA
    AAGATGAAAACTGTCCTCTCACAAGAAAAACGCTACGAAAAGGCAGCTCAGTCCATGACT
    CAAAAACCACTTGAAGAGGAACAAATCCAACTTTTCTTTTCAGACATCCAACCATTACCA
    GCTTCTAAAGTCTTAGTCCAACTGGAAAAAGAAAATTTGTCCATTGACGACCGAGTTTTG
    GTTCAAAAACTACAACTAACTGTCCGTGGCCAAGAAAAAATCGGTATTATCGGGCCAAAT
    GGTGTTGGGAAATCAACTCTGTTAGCCAAGTTACAGAGACTTCTGAATGATAAAAGAGAG
    ATTTCACTTGGTTTTATGCCACAAGATTACCACAAAAAACTGCAATTGGATTTATCCCCA
    ATAGCCTATCTCAGTAAAACTGGGGAAAAAGAGGAACTACAGAAAATCCAATCTCACCTA
    GCTAGTCTCAATTTCAGTTATCCAGAAATGCAGCATCAAATTCGCTCCTTATCTGGCGGA
    CAACAGGGAAAACTCCTGCTTTTGGATTTAGTCCTGCGCAAACCAAACTTTCTCCTGCTG
    GATGAACCCACACGAAACTTTTCTCCCACTTCTCAACCCCAAATCAGAAAACTCTTTGCC
    ACTTATCCTGGCGGTCTCATCACTGTTTCGCATGACCGTCGTTTCTTAAAAGAAGTCTGC
    TCGATCATCTATCGCATGACAGAACACGGTTTGAAGCTAGTTAATTTAGAAGATTTATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPN23F_RS05965 [old locus tags: SPN23F11770 SPN23F_11770 ]
  • symbol: SPN23F_RS05965
  • description: ATP-binding cassette domain-containing protein
  • length: 519
  • theoretical pI: 7.31746
  • theoretical MW: 59540.7
  • GRAVY: -0.531021

⊟Function[edit | edit source]

  • TIGRFAM:
    ATP-binding cassette protein, ChvD family (TIGR03719; HMM-score: 177.5)
    and 92 more
    thiol reductant ABC exporter, CydD subunit (TIGR02857; HMM-score: 125.5)
    Metabolism Transport and binding proteins Unknown substrate energy-coupling factor transporter ATPase (TIGR04521; EC 3.6.3.-; HMM-score: 112.7)
    Cellular processes Cellular processes Toxin production and resistance putative bacteriocin export ABC transporter, lactococcin 972 group (TIGR03608; HMM-score: 111.6)
    Metabolism Transport and binding proteins Unknown substrate putative bacteriocin export ABC transporter, lactococcin 972 group (TIGR03608; HMM-score: 111.6)
    Cellular processes Cellular processes Pathogenesis type I secretion system ATPase (TIGR03375; HMM-score: 101.8)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking type I secretion system ATPase (TIGR03375; HMM-score: 101.8)
    Metabolism Transport and binding proteins Anions phosphate ABC transporter, ATP-binding protein (TIGR00972; EC 3.6.3.27; HMM-score: 94.8)
    thiol reductant ABC exporter, CydC subunit (TIGR02868; HMM-score: 94.2)
    Metabolism Transport and binding proteins Unknown substrate energy-coupling factor transporter ATPase (TIGR04520; EC 3.6.3.-; HMM-score: 90.3)
    Metabolism Transport and binding proteins Cations and iron carrying compounds cobalt ABC transporter, ATP-binding protein (TIGR01166; HMM-score: 89.1)
    Metabolism Transport and binding proteins Anions phosphonate ABC transporter, ATP-binding protein (TIGR02315; EC 3.6.3.28; HMM-score: 86.9)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking lipoprotein releasing system, ATP-binding protein (TIGR02211; EC 3.6.3.-; HMM-score: 86)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system (TIGR03864; HMM-score: 85.9)
    Metabolism Transport and binding proteins Other daunorubicin resistance ABC transporter, ATP-binding protein (TIGR01188; HMM-score: 84.6)
    proposed F420-0 ABC transporter, ATP-binding protein (TIGR03873; HMM-score: 82.5)
    Cellular processes Cellular processes Cell division cell division ATP-binding protein FtsE (TIGR02673; HMM-score: 80.2)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking type I secretion system ATPase (TIGR01842; HMM-score: 79.9)
    Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Other FeS assembly ATPase SufC (TIGR01978; HMM-score: 79.1)
    Metabolism Transport and binding proteins Amino acids, peptides and amines urea ABC transporter, ATP-binding protein UrtE (TIGR03410; HMM-score: 79.1)
    Cellular processes Cellular processes Biosynthesis of natural products NHLM bacteriocin system ABC transporter, ATP-binding protein (TIGR03797; HMM-score: 78.8)
    Metabolism Transport and binding proteins Amino acids, peptides and amines NHLM bacteriocin system ABC transporter, ATP-binding protein (TIGR03797; HMM-score: 78.8)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking heme ABC exporter, ATP-binding protein CcmA (TIGR01189; EC 3.6.3.41; HMM-score: 77.7)
    Metabolism Transport and binding proteins Other heme ABC exporter, ATP-binding protein CcmA (TIGR01189; EC 3.6.3.41; HMM-score: 77.7)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids D-xylose ABC transporter, ATP-binding protein (TIGR02633; EC 3.6.3.17; HMM-score: 77.1)
    Metabolism Transport and binding proteins Amino acids, peptides and amines urea ABC transporter, ATP-binding protein UrtD (TIGR03411; HMM-score: 76.3)
    Metabolism Energy metabolism Methanogenesis methyl coenzyme M reductase system, component A2 (TIGR03269; HMM-score: 75.4)
    Cellular processes Cellular processes Biosynthesis of natural products NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein (TIGR03796; HMM-score: 75.4)
    Metabolism Transport and binding proteins Amino acids, peptides and amines NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein (TIGR03796; HMM-score: 75.4)
    Metabolism Transport and binding proteins Other thiamine ABC transporter, ATP-binding protein (TIGR01277; EC 3.6.3.-; HMM-score: 73.6)
    Cell structure Cell envelope Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides LPS export ABC transporter ATP-binding protein (TIGR04406; HMM-score: 71.6)
    Metabolism Transport and binding proteins Other LPS export ABC transporter ATP-binding protein (TIGR04406; HMM-score: 71.6)
    phosphonate C-P lyase system protein PhnL (TIGR02324; HMM-score: 71.2)
    Metabolism Transport and binding proteins Amino acids, peptides and amines putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TIGR03265; HMM-score: 69.2)
    lantibiotic protection ABC transporter, ATP-binding subunit (TIGR03740; HMM-score: 68.3)
    Metabolism Transport and binding proteins Cations and iron carrying compounds nickel import ATP-binding protein NikD (TIGR02770; HMM-score: 68.1)
    Metabolism Transport and binding proteins Anions sulfate ABC transporter, ATP-binding protein (TIGR00968; EC 3.6.3.25; HMM-score: 67.2)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking type I secretion system ATPase (TIGR01846; HMM-score: 66.9)
    Metabolism Transport and binding proteins Cations and iron carrying compounds nickel import ATP-binding protein NikE (TIGR02769; EC 3.6.3.24; HMM-score: 66.7)
    Metabolism Transport and binding proteins Amino acids, peptides and amines glycine betaine/L-proline transport ATP binding subunit (TIGR01186; HMM-score: 66.3)
    Metabolism Transport and binding proteins Unknown substrate anchored repeat-type ABC transporter, ATP-binding subunit (TIGR03771; HMM-score: 66.1)
    ABC transporter, permease/ATP-binding protein (TIGR02204; HMM-score: 65.9)
    ABC exporter ATP-binding subunit, DevA family (TIGR02982; HMM-score: 64.7)
    ectoine/hydroxyectoine ABC transporter, ATP-binding protein EhuA (TIGR03005; HMM-score: 64.5)
    2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT (TIGR03258; HMM-score: 62.9)
    Cellular processes Cellular processes Other nodulation ABC transporter NodI (TIGR01288; HMM-score: 62.4)
    Metabolism Transport and binding proteins Other nodulation ABC transporter NodI (TIGR01288; HMM-score: 62.4)
    Metabolism Transport and binding proteins Anions nitrate ABC transporter, ATP-binding proteins C and D (TIGR01184; HMM-score: 60.9)
    Metabolism Transport and binding proteins Other nitrate ABC transporter, ATP-binding proteins C and D (TIGR01184; HMM-score: 60.9)
    Metabolism Transport and binding proteins Other pigment precursor permease (TIGR00955; HMM-score: 60)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids peroxysomal long chain fatty acyl transporter (TIGR00954; HMM-score: 59.7)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking ABC-type bacteriocin transporter (TIGR01193; HMM-score: 58.6)
    Genetic information processing Protein fate Protein modification and repair ABC-type bacteriocin transporter (TIGR01193; HMM-score: 58.6)
    Metabolism Transport and binding proteins Other ABC-type bacteriocin transporter (TIGR01193; HMM-score: 58.6)
    Metabolism Transport and binding proteins Other antigen peptide transporter 2 (TIGR00958; HMM-score: 55.9)
    Metabolism Transport and binding proteins Anions molybdate ABC transporter, ATP-binding protein (TIGR02142; EC 3.6.3.29; HMM-score: 55.4)
    gliding motility-associated ABC transporter ATP-binding subunit GldA (TIGR03522; HMM-score: 48.8)
    Cell structure Cell envelope Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides lipid A export permease/ATP-binding protein MsbA (TIGR02203; HMM-score: 48.6)
    Metabolism Transport and binding proteins Other lipid A export permease/ATP-binding protein MsbA (TIGR02203; HMM-score: 48.6)
    Metabolism Transport and binding proteins Anions cystic fibrosis transmembrane conductor regulator (CFTR) (TIGR01271; EC 3.6.3.49; HMM-score: 48.5)
    Metabolism Transport and binding proteins Amino acids, peptides and amines polyamine ABC transporter, ATP-binding protein (TIGR01187; EC 3.6.3.31; HMM-score: 46)
    Metabolism Transport and binding proteins Other multi drug resistance-associated protein (MRP) (TIGR00957; HMM-score: 43.5)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids glucan exporter ATP-binding protein (TIGR01192; EC 3.6.3.42; HMM-score: 42.6)
    Metabolism Transport and binding proteins Amino acids, peptides and amines choline ABC transporter, ATP-binding protein (TIGR03415; HMM-score: 41.3)
    D-methionine ABC transporter, ATP-binding protein (TIGR02314; EC 3.6.3.-; HMM-score: 35.8)
    Metabolism Central intermediary metabolism Phosphorus compounds phosphonate C-P lyase system protein PhnK (TIGR02323; HMM-score: 31.3)
    Metabolism Transport and binding proteins Amino acids, peptides and amines cyclic peptide transporter (TIGR01194; HMM-score: 30.7)
    Metabolism Transport and binding proteins Other cyclic peptide transporter (TIGR01194; HMM-score: 30.7)
    Unknown function General small GTP-binding protein domain (TIGR00231; HMM-score: 30.5)
    Cellular processes Cellular processes Pathogenesis type III secretion apparatus H+-transporting two-sector ATPase (TIGR02546; EC 3.6.3.14; HMM-score: 25.8)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking type III secretion apparatus H+-transporting two-sector ATPase (TIGR02546; EC 3.6.3.14; HMM-score: 25.8)
    Cellular processes Cellular processes Chemotaxis and motility flagellar biosynthesis protein FlhF (TIGR03499; HMM-score: 24.9)
    Genetic information processing DNA metabolism DNA replication, recombination, and repair excinuclease ABC subunit A (TIGR00630; EC 3.1.25.-; HMM-score: 22.8)
    Cellular processes Cellular processes Chemotaxis and motility flagellar protein export ATPase FliI (TIGR03496; EC 3.6.3.14; HMM-score: 22.8)
    Metabolism Transport and binding proteins Other pleiotropic drug resistance family protein (TIGR00956; HMM-score: 22.7)
    Genetic information processing Protein synthesis Other GTP-binding protein Era (TIGR00436; HMM-score: 21.4)
    Genetic information processing Protein synthesis Other ribosome biogenesis GTPase YqeH (TIGR03597; HMM-score: 20.4)
    Metabolism Energy metabolism ATP-proton motive force interconversion ATPase, FliI/YscN family (TIGR01026; EC 3.6.3.14; HMM-score: 19.6)
    Genetic information processing Protein synthesis tRNA and rRNA base modification tRNA modification GTPase TrmE (TIGR00450; EC 3.6.-.-; HMM-score: 18.4)
    flagellar protein export ATPase FliI (TIGR03498; EC 3.6.3.14; HMM-score: 18.4)
    Cellular processes Cellular processes Chemotaxis and motility flagellar protein export ATPase FliI (TIGR03497; EC 3.6.3.14; HMM-score: 18.2)
    Metabolism Transport and binding proteins Other rim ABC transporter (TIGR01257; HMM-score: 17.8)
    Metabolism Transport and binding proteins Amino acids, peptides and amines LAO/AO transport system ATPase (TIGR00750; EC 2.7.-.-; HMM-score: 17.5)
    Signal transduction Regulatory functions Protein interactions LAO/AO transport system ATPase (TIGR00750; EC 2.7.-.-; HMM-score: 17.5)
    Genetic information processing Protein synthesis Translation factors ribosome small subunit-dependent GTPase A (TIGR00157; EC 3.6.-.-; HMM-score: 17.2)
    Genetic information processing Protein synthesis Other ribosome-associated GTPase EngA (TIGR03594; HMM-score: 17.1)
    Metabolism Energy metabolism Amino acids and amines ethanolamine utilization protein, EutP (TIGR02528; HMM-score: 16.5)
    P-type DNA transfer ATPase VirB11 (TIGR02788; HMM-score: 15.9)
    nicotinamide-nucleotide adenylyltransferase (TIGR01526; EC 2.7.7.1; HMM-score: 15.3)
    Metabolism Central intermediary metabolism Nitrogen metabolism urease accessory protein UreG (TIGR00101; HMM-score: 14.4)
    Metabolism Central intermediary metabolism Phosphorus compounds phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN (TIGR02322; HMM-score: 13)
    helicase/secretion neighborhood ATPase (TIGR03819; HMM-score: 12.6)
    Genetic information processing Protein synthesis Other Obg family GTPase CgtA (TIGR02729; HMM-score: 7.3)
  • TheSEED: see SPN23F11770
  • PFAM:
    P-loop_NTPase (CL0023) ABC_tran; ABC transporter (PF00005; HMM-score: 116.4)
    and 54 more
    AAA_21; AAA domain, putative AbiEii toxin, Type IV TA system (PF13304; HMM-score: 38.3)
    SMC_N; RecF/RecN/SMC N terminal domain (PF02463; HMM-score: 35.7)
    AAA_29; P-loop containing region of AAA domain (PF13555; HMM-score: 33.4)
    AAA_22; AAA domain (PF13401; HMM-score: 32.9)
    RsgA_GTPase; RsgA GTPase (PF03193; HMM-score: 32.5)
    AAA_16; AAA ATPase domain (PF13191; HMM-score: 32.1)
    AAA_15; AAA ATPase domain (PF13175; HMM-score: 29.1)
    AAA_18; AAA domain (PF13238; HMM-score: 28.7)
    MMR_HSR1; 50S ribosome-binding GTPase (PF01926; HMM-score: 28.5)
    NACHT; NACHT domain (PF05729; HMM-score: 28.1)
    AAA_24; AAA domain (PF13479; HMM-score: 27.5)
    AAA_14; AAA domain (PF13173; HMM-score: 26.3)
    Roc; Ras of Complex, Roc, domain of DAPkinase (PF08477; HMM-score: 26.2)
    ATP-synt_ab; ATP synthase alpha/beta family, nucleotide-binding domain (PF00006; HMM-score: 22.8)
    NTPase_1; NTPase (PF03266; HMM-score: 22.8)
    RNA_helicase; RNA helicase (PF00910; HMM-score: 21.6)
    AAA_7; P-loop containing dynein motor region (PF12775; HMM-score: 21.1)
    AAA_28; AAA domain (PF13521; HMM-score: 19.1)
    DUF5906; Family of unknown function (DUF5906) (PF19263; HMM-score: 18.5)
    Mg_chelatase; Magnesium chelatase, subunit ChlI (PF01078; HMM-score: 18.4)
    TsaE; Threonylcarbamoyl adenosine biosynthesis protein TsaE (PF02367; HMM-score: 18.4)
    AAA_5; AAA domain (dynein-related subfamily) (PF07728; HMM-score: 17.8)
    NB-ARC; NB-ARC domain (PF00931; HMM-score: 17.6)
    MeaB; Methylmalonyl Co-A mutase-associated GTPase MeaB (PF03308; HMM-score: 17.5)
    AAA_33; AAA domain (PF13671; HMM-score: 17.5)
    KAP_NTPase; KAP family P-loop domain (PF07693; HMM-score: 17.1)
    DO-GTPase2; Double-GTPase 2 (PF19993; HMM-score: 17)
    bpMoxR; MoxR domain in the MoxR-vWA-beta-propeller ternary systems (PF20030; HMM-score: 16.9)
    Sigma54_activat; Sigma-54 interaction domain (PF00158; HMM-score: 16.7)
    Septin; Septin (PF00735; HMM-score: 16.6)
    ATPase_2; ATPase domain predominantly from Archaea (PF01637; HMM-score: 16)
    PRK; Phosphoribulokinase / Uridine kinase family (PF00485; HMM-score: 15.8)
    PduV-EutP; Ethanolamine utilisation - propanediol utilisation (PF10662; HMM-score: 15)
    AAA_30; AAA domain (PF13604; HMM-score: 15)
    AAA_25; AAA domain (PF13481; HMM-score: 14.8)
    AAA; ATPase family associated with various cellular activities (AAA) (PF00004; HMM-score: 14.1)
    MCM; MCM P-loop domain (PF00493; HMM-score: 13.7)
    no clan defined MCM3AP_GANP; MCM3AP domain of GANP (PF16769; HMM-score: 13.7)
    P-loop_NTPase (CL0023) ATP_bind_1; Conserved hypothetical ATP binding protein (PF03029; HMM-score: 13.4)
    SRP54; SRP54-type protein, GTPase domain (PF00448; HMM-score: 13.3)
    DUF87; Helicase HerA, central domain (PF01935; HMM-score: 13.3)
    ABC_ATPase; ATPase of the ABC class (PF09818; HMM-score: 13.3)
    Ras; Ras family (PF00071; HMM-score: 13.2)
    Arf; ADP-ribosylation factor family (PF00025; HMM-score: 13)
    AAA_23; AAA domain (PF13476; HMM-score: 13)
    MobB; Molybdopterin guanine dinucleotide synthesis protein B (PF03205; HMM-score: 12.9)
    cobW; CobW/HypB/UreG, nucleotide-binding domain (PF02492; HMM-score: 12.8)
    Dynamin_N; Dynamin family (PF00350; HMM-score: 12.3)
    SpoIVA_ATPase; Stage IV sporulation protein A, ATPase domain (PF09547; HMM-score: 11.9)
    GTP_EFTU; Elongation factor Tu GTP binding domain (PF00009; HMM-score: 11.6)
    no clan defined Bap31_Bap29_C; Bap31/Bap29 cytoplasmic coiled-coil domain (PF18035; HMM-score: 8.5)
    P-loop_NTPase (CL0023) ABC_tran_Xtn; ABC transporter (PF12848; HMM-score: 7.9)
    AAA_11; AAA domain (PF13086; HMM-score: 7.1)
    G-alpha; G-protein alpha subunit (PF00503; HMM-score: 5.9)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9845
    • Cytoplasmic Membrane Score: 0.0131
    • Cell wall & surface Score: 0.0006
    • Extracellular Score: 0.0018
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.004853
    • TAT(Tat/SPI): 0.000371
    • LIPO(Sec/SPII): 0.000704
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_001861318 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MHYRHSRKGNSMIKINHLTITQNKDLRDLVSDLSMTIQDGEKVAIIGEEGNGKSTLLKTLMGEDLSDFTIKGDIQSDYQSLAYIPQKLPEELKKKTLHDYFFLDSIDLDYSILYRLAEELHFDSNRFASDQEIGNLSGGEALKIQLIHELAKPFEILFLDEPSNDLDLETVDWLKGQIQKTRQTVIFISHDEDFLSETADTIVHLRLVKHRKEAETLVEHLDYDSYSEQRKANFAKQSQQAANNQRAYDKTMEKHRRVKQNVETALRATKDSTAGRLLAKKMKTVLSQEKRYEKAAQSMTQKPLEEEQIQLFFSDIQPLPASKVLVQLEKENLSIDDRVLVQKLQLTVRGQEKIGIIGPNGVGKSTLLAKLQRLLNDKREISLGFMPQDYHKKLQLDLSPIAYLSKTGEKEELQKIQSHLASLNFSYPEMQHQIRSLSGGQQGKLLLLDLVLRKPNFLLLDEPTRNFSPTSQPQIRKLFATYPGGLITVSHDRRFLKEVCSIIYRMTEHGLKLVNLEDL

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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