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serotype 4
D39
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D39V
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Hungary19A-6
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EF3030
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670-6B
serotype 6B
6A-10
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70585
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A66
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AP200
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HU-OH
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Hu15
serotype 19A
Hu17
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INV200
serotype 14
JJA
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MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
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OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
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SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 26-AUG-2017

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae OXC141
  • locus tag: SPNOXC04610 [new locus tag: SPNOXC_RS02505 ]
  • pan locus tag?: PNEUPAN001360000
  • symbol: SPNOXC04610
  • pan gene symbol?: nptA
  • synonym:
  • product: putative Na+/Pi-cotransporter protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPNOXC04610 [new locus tag: SPNOXC_RS02505 ]
  • symbol: SPNOXC04610
  • product: putative Na+/Pi-cotransporter protein
  • replicon: chromosome
  • strand: -
  • coordinates: 458787..460418
  • length: 1632
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    1561
    1621
    ATGTCCATTAATTGGCAGGAAATTTTATTTCACTTTTTAGGTGGTCTGGGGCTATTCTTA
    TATAGTATCAAGACCATGGGAGACGGTTTGCAACAAGCTGCTGGAGATCGCCTTCGTTTT
    TACATTGACAAATATACTAGTAATCCTTTCTTTGGAGTTCTGGTTGGTATTGGGATGACT
    GCTCTAATTCAGTCTAGTTCTGGTGTAACAGTTATTACAGTCGGCCTGGTCAGTGCCGGT
    CTCTTAACCTTACGTCAGGCTATCGGGATTGTCATGGGTGCTAATATTGGGACAACTGTC
    ACATCCTTTCTCATCGGTTTTAAATTAGGTAACTATGCCCTACCTATGCTCTTTATCGGT
    GCCGTCTGTCTCTTTTTTACAAAAAATCGGACAGTCAATAATATCGGACGCATCCTCTTT
    GGTGTCGGTGGTATCTTTTTTGCCCTCAATCTCATGAGCGGCGCAATGGCTCCACTCAAG
    GATTTACAGGTCTTTAAGGACTATATGATTGAGCTAAGTAAGAATCCTGTTTTGGGTGTC
    TTTGTCGGTACCGGCTTGACCTTGCTAATTCAAGCTTCTTCGGCTACCATTGGGATTTTA
    CAAAACCTCTACGCCGGCAATCTAATTGACCTACAGGGAGCTTTGCCAGTTCTATTTGGT
    GACAATATCGGGACAACCATTACAGCCATCATTGCCTCTTTAGGGGCTAATATTGCAGCT
    AAACGGGTAGCAGGAGCTCATGTTGCCTTCAACGTTATCGGAACAGTCGTCTGCGTTATT
    TTTCTAGTTCCTTTTACTGTCCTGATTCATTGGTTTGAAGCTACGCTAAATCTAGCACCA
    GAAATGACCATCGCCTTTGCTCACGGAACCTTTAATATTACCAACACCATTGTCCAATTT
    CCATTTATCGGAGCTCTGGCTTACTTTGTAACCAAGATTATTCCTGGAGAGGACGAGGTT
    GTAAAATACGAACCCTTATATCTTGATGAACATTTCATCAAACAGGCCCCATCTATCGCT
    CTAGGAAATGCTAAGAAAGAGCTCTTGCACTTAGGAAACTACGCTGCTAAAGCCTTTGAC
    CTTTCCTATAAGTACATCATTGACTTGGATGAAAAAGTTGCTGAAAAAGGGCATAAAACC
    GAAGAAGCAATTAACACCATCGATGAGCAATTAACACGTTATCTCATTGCCCTTTCAAGC
    GAAGCTCTCAGCCAAAAAGAAAGTGAAGTGCTCACCAATATCCTTGATTCCTCCCGTGAT
    TTGGAACGGATTGGAGACCACACGGAGGCTCTACTCAATCTGACTGACTATCTTCAACGG
    AAAAATGTTGAATTTTCTGATGCCGCCTTGAAAGAATTAGAGGAAGTTTACCGCCAAACT
    AGTGACTTTATCAAAGATGCTCTGGATAGTGTGGAAAACAATGATATTGAAAAAGCACGC
    AGTCTTGTAGAACGTCATGAAGCAATCAATAAGATAGAACGTGTTCTCAGAAAAACCCAC
    ATCAAACGCCTCAACAAAGGCGAATGTTCAACACAAGCTGGGGTCAACTTTATCGACATC
    ATCTCACACTACACTCGTGTATCAGACCACGCTATGAACCTTGCTGAAAAGGTTTTTGCA
    GAACAAATCTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1560
    1620
    1632

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPNOXC04610 [new locus tag: SPNOXC_RS02505 ]
  • symbol: SPNOXC04610
  • description: putative Na+/Pi-cotransporter protein
  • length: 543
  • theoretical pI: 5.94958
  • theoretical MW: 59574.6
  • GRAVY: 0.307182

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Cations and iron carrying compounds Na/Pi-cotransporter II-related protein (TIGR00704; HMM-score: 232.5)
    and 3 more
    Metabolism Transport and binding proteins Cations and iron carrying compounds sodium-dependent inorganic phosphate (Pi) transporter (TIGR01013; HMM-score: 112.8)
    Metabolism Transport and binding proteins Anions phosphate transport system regulatory protein PhoU (TIGR02135; HMM-score: 71.5)
    Signal transduction Regulatory functions Other phosphate transport system regulatory protein PhoU (TIGR02135; HMM-score: 71.5)
  • TheSEED  :
    • Sodium-dependent phosphate transporter
    Phosphorus Metabolism Phosphorus Metabolism - no subcategory Phosphate metabolism  Sodium-dependent phosphate transporter
  • PFAM:
    no clan defined Na_Pi_cotrans; Na+/Pi-cotransporter (PF02690; HMM-score: 208.5)
    and 3 more
    PhoU (CL0297) PhoU; PhoU domain (PF01895; HMM-score: 77.8)
    P-loop_NTPase (CL0023) AAA_30; AAA domain (PF13604; HMM-score: 13.5)
    no clan defined CorA; CorA-like Mg2+ transporter protein (PF01544; HMM-score: 8.5)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 9
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.0001
    • Cytoplasmic Membrane Score: 0.999
    • Cell wall & surface Score: 0
    • Extracellular Score: 0.0009
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.082303
    • TAT(Tat/SPI): 0.006046
    • LIPO(Sec/SPII): 0.010017
  • predicted transmembrane helices (TMHMM): 7

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: CBW32119 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MSINWQEILFHFLGGLGLFLYSIKTMGDGLQQAAGDRLRFYIDKYTSNPFFGVLVGIGMTALIQSSSGVTVITVGLVSAGLLTLRQAIGIVMGANIGTTVTSFLIGFKLGNYALPMLFIGAVCLFFTKNRTVNNIGRILFGVGGIFFALNLMSGAMAPLKDLQVFKDYMIELSKNPVLGVFVGTGLTLLIQASSATIGILQNLYAGNLIDLQGALPVLFGDNIGTTITAIIASLGANIAAKRVAGAHVAFNVIGTVVCVIFLVPFTVLIHWFEATLNLAPEMTIAFAHGTFNITNTIVQFPFIGALAYFVTKIIPGEDEVVKYEPLYLDEHFIKQAPSIALGNAKKELLHLGNYAAKAFDLSYKYIIDLDEKVAEKGHKTEEAINTIDEQLTRYLIALSSEALSQKESEVLTNILDSSRDLERIGDHTEALLNLTDYLQRKNVEFSDAALKELEEVYRQTSDFIKDALDSVENNDIEKARSLVERHEAINKIERVLRKTHIKRLNKGECSTQAGVNFIDIISHYTRVSDHAMNLAEKVFAEQI

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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