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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 31-JAN-2014
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae P1031
- locus tag: SPP_1512 [new locus tag: SPP_RS07425 ]
- pan locus tag?: PNEUPAN002773000
- symbol: SPP_1512
- pan gene symbol?: inlJ
- synonym:
- product: conserved hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPP_1512 [new locus tag: SPP_RS07425 ]
- symbol: SPP_1512
- product: conserved hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 1401140..1402054
- length: 915
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP000920 (1401140..1402054) NCBI
- BioCyc: see SPP_RS07425
- MicrobesOnline: 7482000 MicrobesOnline
- PneumoBrowse for strain D39V: SPV_1322 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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901GTGGGCTCTGGAGATAGCAAACTAGGAAAAGGCGGCTATTTCTCTACTGGGGATGTTCTA
TTAGGAAAAGATGTTGTTTCTTATACCGTACAAGTATTTTCAGAGAATAATGAAAGAGTA
GGAGTAAACACTCAAAGTCACCGTGTTCAGTATAATCTCCCAATTCTAGCTGACTTTTCA
GTCATCCAAGATACTGTGGAACCATCACGAACCGTTGTTGAAAAAATCATTCCAAAACTA
AATATTCCCGAAGAAGAGAAAGGGAAAATAACCGAAGAAATCAAGAAAAAGAAAAAAACC
TCAGAATTGGCAGAACTAATCTTAGAAAATGTGAAAGTTCGCTATGTTGATGAACAAGGG
CGTTTGCTATCATTGAAAAATGATACTGGAATTGGAGAAAAAGAAAGTGACGGAACCTAC
ATTACCAATAAAAAACAACTGATTGGTACCAGCTACAATGTCACAGATAAAAAACTCAGT
AGCATGACTACTACTGACGGAAAATATTATACTTTTAAAGAAGCAGATACAAATTCTGCA
AGTTTAACTGGGAATATTGTAAGCGAAGGTAGAACAGTGACCTTAGTTTATAGAGAAAGC
GAAGCGCCAACCACTGCTACAGTAACAGCCAATTACTATAAAGAAGGTAGCCAAGAGAAG
TTGGCAGAGTCTGTTATAAAAGCTGATTTAGCGATAGGTTCTGAGTATACCACAGAATCA
AAAACTATTGAAGGGAAAACAACAACTGAGGACAAAGAAGACCGAGTTATCACAAGGAAA
ACAACATACACCTTGGTAGCAACTCCTGCAAATGCGTACCAGAAGACGGTGCAACAGTTG
ACTATTACTACCGTGAGAATGTTGAGGAAACAGTGGTTCCCAAAACAGCAACCTCTACTG
AGACGAAGACTATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPP_1512 [new locus tag: SPP_RS07425 ]
- symbol: SPP_1512
- description: conserved hypothetical protein
- length: 304
- theoretical pI: 9.34509
- theoretical MW: 33980.1
- GRAVY: -0.626974
⊟Function[edit | edit source]
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: unknown (no significant prediction)
- Cytoplasmic Score: 2.5
- Cytoplasmic Membrane Score: 2.5
- Cellwall Score: 2.5
- Extracellular Score: 2.5
- Internal Helices: 0
- DeepLocPro: Cell wall & surface
- Cytoplasmic Score: 0.0057
- Cytoplasmic Membrane Score: 0.0463
- Cell wall & surface Score: 0.6768
- Extracellular Score: 0.2713
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.0097
- TAT(Tat/SPI): 0.001195
- LIPO(Sec/SPII): 0.001571
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ACO20538 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MGSGDSKLGKGGYFSTGDVLLGKDVVSYTVQVFSENNERVGVNTQSHRVQYNLPILADFSVIQDTVEPSRTVVEKIIPKLNIPEEEKGKITEEIKKKKKTSELAELILENVKVRYVDEQGRLLSLKNDTGIGEKESDGTYITNKKQLIGTSYNVTDKKLSSMTTTDGKYYTFKEADTNSASLTGNIVSEGRTVTLVYRESEAPTTATVTANYYKEGSQEKLAESVIKADLAIGSEYTTESKTIEGKTTTEDKEDRVITRKTTYTLVATPANAYQKTVQQLTITTVRMLRKQWFPKQQPLLRRRL
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1322 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]