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NCBI: 25-NOV-2024

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae R6
  • locus tag: SPR_RS04815 [old locus tag: spr0962 ]
  • pan locus tag?: PNEUPAN002190000
  • symbol: SPR_RS04815
  • pan gene symbol?: —
  • synonym:
  • product: PIG-L deacetylase family protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPR_RS04815 [old locus tag: spr0962 ]
  • symbol: SPR_RS04815
  • product: PIG-L deacetylase family protein
  • replicon: chromosome
  • strand: +
  • coordinates: 943190..943798
  • length: 609
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    GTGAAAAAAGCATTAATAATTACTGCCCATCCAGATGATGCTGAAATTTCTATGGGTGGA
    CATATAATTAATATGGTTAATAATGGTTATTATGTCAAACTACTGGTTTTATCAGTTCCA
    GAAGATAAAACGAGGATTTTAGAAGCAGGAAAGTCTGCAGAATTTCTAGGGATAGAATTA
    AAAATAGTTGGTGACAAATCTCAAGTTTCTCAGTTTAGTTCAAGTGAATTAGTTTCAATT
    ATTGATAACGAAATTGAGGAATTTGATCCATCTTATGTTTTTACACATTGGGAAAATGAT
    GCCCATAAAGATCATCGAATAATATTTAAAGCTGTGCAGTCCTCTAGTAGGTGTCATTCG
    TTTACTTTTCTATCGTTTTCTCCTCCTAATATATATGTTAGCAATGCTTTGCAGTTTGTT
    CCAAATATTTTTGTAGAAATCAATATTGAGAAAAAGTTGAGGGCTATTGAATTCCATAGA
    AGTCAAGTGAATCAAAAGTCATATCCAATAGATGGACCTAAAGTTCAATCTGTCTTATTT
    GGTAAACATATAGGAGTAGATTATGCAGAGGGATTTATACTGATTAGACACATAGATAGA
    AAGTGTTAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    609

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPR_RS04815 [old locus tag: spr0962 ]
  • symbol: SPR_RS04815
  • description: PIG-L deacetylase family protein
  • length: 202
  • theoretical pI: 6.79744
  • theoretical MW: 22922.1
  • GRAVY: -0.123267

⊟Function[edit | edit source]

  • reaction:
    EC 3.5.1.-?  ExPASy
  • TIGRFAM:
    Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Glutathione and analogs bacillithiol biosynthesis deacetylase BshB1 (TIGR04001; EC 3.-.-.-; HMM-score: 65.7)
    and 2 more
    Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Glutathione and analogs bacillithiol biosynthesis deacetylase BshB2 (TIGR04000; EC 3.-.-.-; HMM-score: 33.1)
    Cellular processes Cellular processes Detoxification N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D-glucopyranoside deacetylase (TIGR03445; EC 3.5.1.103; HMM-score: 12.6)
  • TheSEED: see spr0962
  • PFAM:
    no clan defined PIG-L; GlcNAc-PI de-N-acetylase (PF02585; HMM-score: 54.8)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9848
    • Cytoplasmic Membrane Score: 0.0015
    • Cell wall & surface Score: 0.0001
    • Extracellular Score: 0.0136
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.006159
    • TAT(Tat/SPI): 0.000121
    • LIPO(Sec/SPII): 0.000662
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MKKALIITAHPDDAEISMGGHIINMVNNGYYVKLLVLSVPEDKTRILEAGKSAEFLGIELKIVGDKSQVSQFSSSELVSIIDNEIEEFDPSYVFTHWENDAHKDHRIIFKAVQSSSRCHSFTFLSFSPPNIYVSNALQFVPNIFVEINIEKKLRAIEFHRSQVNQKSYPIDGPKVQSVLFGKHIGVDYAEGFILIRHIDRKC

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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