PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

NCBI: 11-DEC-2024

⊟Summary

• organism: Streptococcus pneumoniae A026
• locus tag: T308_RS06175 [old locus tag: T308_06085 ]
• pan locus tag^?: PNEUPAN001877000
• symbol: T308_RS06175
• pan gene symbol^?: —
• synonym:
• product: alpha/beta hydrolase

⊟Genome View

⊟Gene

⊟General

• type: CDS
• locus tag: T308_RS06175 [old locus tag: T308_06085 ]
• symbol: T308_RS06175
• product: alpha/beta hydrolase
• replicon: chromosome
• strand: -
• coordinates: 1188921..1189637
• length: 717
• essential: unknown

⊟Accession numbers

• Location: NC_022655 (1188921..1189637) NCBI
• BioCyc: T308_RS06175 BioCyc
• MicrobesOnline:
• PneumoBrowse for strain D39V: SPV_0796 PneumoBrowse

⊟Phenotype

Share your knowledge and add information here. [edit]

⊟DNA sequence

• 1
  61
  121
  181
  241
  301
  361
  421
  481
  541
  601
  661
  
  ATGAAAAAATATTTTATTGGCGGTTTGGGAAGCAATGCCTATCATAGCAAGGATTTTCTT
  CAAGAACTAGATTCGCAGGTCTATTTTCTAAATCCATATGAAAAGCATCTTCGAGATGAA
  ACAGAATTGAAATCATGGTTTAAAAATGAGATTGTAGAGGAAGAATCTATCTGTCTGATA
  GGTCATTCTATTGGAGGCGATTTAGCTCGTTATTTCGCATCGGAATTTGAAGAAGTAAAG
  AAACTGATTCTTTTGGATGGTGGCTATCTAGATTTAGATAAGATTTTACCTTTGGATACA
  GAGTTAGAGGAAACTAAAAATTATATCAAATCTCAAATTATTTCGGACTTAGATGTTCTT
  ACTTCTAAAGAAAAATCTGAAGCAAAGCATTGGTCAGAAAATATGGAGAAAGCTGTAAGA
  CAGTCCTATCACTGGAATGTTGAGTATAATAGATATGAGTTGGCTATAAATTATGAAAAT
  ATAGAAGCGATACTCCGCCTACGGAGAAAAATACAAGCTTTTAAGAGAGAAGTGGGAGAT
  ACCTTGTTTATTAGTCCTCGCTATCCTAATGAAGCTACATGGAGAGAGGAAGCCCTAAAA
  GAATTGCCAGACTATTTTGATACTATTTTTTTAGAAAACTTTGGCCATGAGCTTTATACT
  CAAGCACCTAAAGAAATCGCTAGTCTAATGAATGAGTGGCTCGCTTATTTTCTATGA
  60
  120
  180
  240
  300
  360
  420
  480
  540
  600
  660
  717
  

⊟Protein

⊟General

• locus tag: T308_RS06175 [old locus tag: T308_06085 ]
• symbol: T308_RS06175
• description: alpha/beta hydrolase
• length: 238
• theoretical pI: 4.63651
• theoretical MW: 28207.6
• GRAVY: -0.542857

⊟Function

• TIGRFAM:
  Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Menaquinone and ubiquinone 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (TIGR03695; EC 4.2.99.20; HMM-score: 18.4)
  and 1 more
  Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Glutathione and analogs putative glutamate--cysteine ligase (TIGR02048; EC 6.3.2.2; HMM-score: 12.3)
• TheSEED: data available for D39, Hungary19A-6, TIGR4
• PFAM:
  AB_hydrolase (CL0028) Abhydrolase_1; alpha/beta hydrolase fold (PF00561; HMM-score: 20.5)
  BAAT_C; BAAT / Acyl-CoA thioester hydrolase C terminal (PF08840; HMM-score: 19.3)
  PGAP1; PGAP1-like protein (PF07819; HMM-score: 17.7)
  Palm_thioest; Palmitoyl protein thioesterase (PF02089; HMM-score: 16.9)
  and 9 more
  Lipase_3; Lipase (class 3) (PF01764; HMM-score: 15.3)
  Hydrolase_4; Serine aminopeptidase, S33 (PF12146; HMM-score: 15.1)
  LCAT; Lecithin:cholesterol acyltransferase (PF02450; HMM-score: 14.6)
  Vps51 (CL0295) Vps53_N; Vps53-like, N-terminal (PF04100; HMM-score: 13.9)
  no clan defined NdhM; Cyanobacterial and plastid NDH-1 subunit M (PF10664; HMM-score: 12.9)
  AB_hydrolase (CL0028) Mbeg1-like; Mbeg1-like (PF11187; HMM-score: 12.9)
  Abhydrolase_5; Alpha/beta hydrolase family (PF12695; HMM-score: 12.8)
  Abhydrolase_3; alpha/beta hydrolase fold (PF07859; HMM-score: 12.7)
  DLH; Dienelactone hydrolase family (PF01738; HMM-score: 12)

⊟Structure, modifications & cofactors

• domains:
• modifications:
• cofactors:
• effectors:

⊟Localization

• PSORTb: Cytoplasmic
  • Cytoplasmic Score: 7.5
  • Cytoplasmic Membrane Score: 1.15
  • Cellwall Score: 0.62
  • Extracellular Score: 0.73
  • Internal Helices: 0
• DeepLocPro: Cytoplasmic
  • Cytoplasmic Score: 0.9715
  • Cytoplasmic Membrane Score: 0.0069
  • Cell wall & surface Score: 0.0007
  • Extracellular Score: 0.0209
• SignalP: no predicted signal peptide
  • SP(Sec/SPI): 0.004197
  • TAT(Tat/SPI): 0.000078
  • LIPO(Sec/SPII): 0.000523
• predicted transmembrane helices (TMHMM): 0

⊟Accession numbers

• GI:
• RefSeq: WP_000759775 NCBI
• UniProt:

⊟Protein sequence

• MKKYFIGGLGSNAYHSKDFLQELDSQVYFLNPYEKHLRDETELKSWFKNEIVEEESICLIGHSIGGDLARYFASEFEEVKKLILLDGGYLDLDKILPLDTELEETKNYIKSQIISDLDVLTSKEKSEAKHWSENMEKAVRQSYHWNVEYNRYELAINYENIEAILRLRRKIQAFKREVGDTLFISPRYPNEATWREEALKELPDYFDTIFLENFGHELYTQAPKEIASLMNEWLAYFL

⊟Experimental data

• protein localization:
• interaction partners:

⊟Expression & Regulation

⊟Operon

⊟Regulation

• regulator:

⊟Transcription

• transcription start site:

⊟Expression data

• PneumoExpress for strain D39V: SPV_0796 PneumoExpress

⊟Biological Material

⊟Mutants

⊟Expression vector

⊟lacZ fusion

⊟GFP fusion

⊟two-hybrid system

⊟FLAG-tag construct

⊟Antibody

⊟Other Information

You can add further information about the gene and protein here. [edit]

⊟Literature

⊟References

⊟Relevant publications