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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 07-FEB-2021
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae AP200
- locus tag: SPAP_RS11065 [old locus tag: SPAP_2238 ]
- pan locus tag?: PNEUPAN003923000
- symbol: SPAP_RS11065
- pan gene symbol?: clpC
- synonym:
- product: ATP-dependent Clp protease ATP-binding subunit
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPAP_RS11065 [old locus tag: SPAP_2238 ]
- symbol: SPAP_RS11065
- product: ATP-dependent Clp protease ATP-binding subunit
- replicon: chromosome
- strand: -
- coordinates: 2083845..2086277
- length: 2433
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_014494 (2083845..2086277) NCBI
- BioCyc: SPAP_RS11065 BioCyc
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_2022 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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2401ATGAACTATTCAAAAGCATTGAATGAATGTATCGAAAGTGCCTACATGGTTGCTGGACAT
TTTGGAGCTCGTTATCTAGAGTCGTGGCACTTGTTGATTGCCATGTCTAATCACAGTTAT
AGTGTAGCAGGGGCAACTTTAAATGATTATCCGTATGAGATGGACCGTTTAGAAGAGGTG
GCTTTGGAACTGACTGAAACGGACTATAGCCAGGATGAAACCTTTACGGAATTGCCGTTC
TCCCGTCGTTTGCAGGTTCTTTTTGACGAAGCAGAGTATGTAGCGTCAGTGGTCCATGCT
AAGGTGCTAGGGACAGAGCACGTCCTCTATGCGATTTTGCATGATGGCAATGCCTTGGCG
ACTCGTATCTTGGAGAGGGCTGGTTTTTCTTATGAAGACAAGAAAGATCAGGTCAAGATT
GCTGCTCTTCGTCGAAATTTAGAAGAACGGGCAGGCTGGACTCGTGAAGATCTCAAGGCT
TTACGCCAACGCCATCGTACAGTAGCTGACAAGCAAAATTCTATGGCCAATATGATGGGC
ATGCCGCAGACTCCTAGTGGTGGTCTCGAGGACTATACGCATGATTTGACAGAGCAAGCG
CGTTCTGGCAAGTTAGAACCAGTCATCGGTCGGGACAAGGAAATCTCACGTATGATTCAA
ATTTTGAGCCGTAAGACTAAGAACAACCCTGTCTTGGTTGGGGATGCTGGTGTCGGGAAA
ACAGCTCTGGCCCTTGGTCTTGCCCAGCGTATTGCTAGTGGTGACGTGCCTGCGGAAATG
GCTAAGATGCGCGTGTTAGAACTTGATTTGATGAATGTCGTTGCAGGGACACGCTTCCGT
GGTGACTTTGAAGAACGCATGAATAATATCATCAAGGATATTGAAGAAGATGGCCAAGTC
ATCCTCTTTATCGATGAACTCCACACCATCATGGGTTCTGGTAGCGGGATTGATTCGACT
CTGGATGCGGCCAATATCTTGAAACCAGCCTTGGCGCGTGGAACTTTGAGAACGGTTGGT
GCCACCACTCAGGAAGAATATCAAAAACATATCGAAAAAGATGCGGCTCTTTCTCGTCGT
TTCGCTAAAGTGACGATTGAAGAACCAAGTGTGGCAGATAGTATGACTATTTTACAAGGT
TTGAAGGCGACTTATGAGAAACATCACCGTGTACAAATCACAGATGAAGCGGTTGAAACA
GCGGTTAAGATGGCTCATCGTTATTTAACCAGTCGTCACTTGCCAGACTCTGCTATCGAC
CTCTTGGACGAAGCAGCAGCAACAGTGCAAAATAAGGCAAAGCATGTAAAAGCAGACGAT
TCAGATTTGAGTCCAGCTGACAAGGCCCTGATGGATGGCAAGTGGAAACAGGCAGCCCAG
CTAATCGCAAAAGAAGAGGAAGTACCTGTCTACAAAGACTTGGTGACAGAGTCTGATATT
TTGACCACCTTGAGTCGCTTGTCAGGAATCCCAGTTCAAAAACTGACTCAAACGGATGCT
AAGAAGTATTTAAATCTTGAAGCAGAACTCCATAAACGTGTCATCGGTCAAGATCAAGCT
GTTTCAAGTATTAGTCGTGCCATTCGCCGTAATCAGTCAGGAATTCGCAGTCACAAGCGT
CCGATCGGTTCCTTTATGTTCCTAGGACCCACAGGTGTCGGTAAGACCGAGTTGGCCAAG
GCTTTGGCAGAAGTTCTCTTTGATGACGAATCAGCCCTTATCCGCTTTGATATGAGTGAG
TATATGGAGAAATTCGCAGCCAGCCGTCTAAATGGAGCTCCTCCAGGCTATGTGGGTTAC
GAAGAAGGTGGGGAGTTGACAGAGAAGGTTCGCAATAAACCCTATTCCGTTCTCCTCTTT
GATGAGGTAGAGAAGGCTCACCCAGATATCTTTAATGTTCTCTTGCAGGTTCTGGATGAC
GGTGTCTTGACAGATAGCAAGGGACGCAAGGTCGATTTTTCAAATACCATTATCATTATG
ACATCGAACCTAGGTGCGACTGCCCTTCGTGATGATAAGACTGTTGGTTTTGGGGCTAAG
GATATTCGTTTTGACCAGGAAAATATGGAAAAACGCATGTTTGAAGAACTGAAAAAAGCT
TATAGACCGGAATTCATCAACCGTATTGATGAGAAGGTGGTCTTCCATAGCCTATCTAGT
GACCATATGCAGGAAGTGGTGAAGATTATGGTCAAGCCTTTAGTGGCAAGTTTGGCTGAA
AAAGGCATTGACTTGAAATTACAAGCTTCAGCTCTGAAATTGTTAGCAAATCAAGGATAT
GACCCAGAGATGGGAGCTCGCCCACTTCGCAGAACCCTGCAAACAGAAGTGGAGGACAAG
TTGGCAGAACTTCTTCTTAAGGGAGATTTAGTGGCAGGCAGCACACTTAAGATTGGTGTC
AAAGCAGGCCAGTTAAAATTTGATATTGCATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPAP_RS11065 [old locus tag: SPAP_2238 ]
- symbol: SPAP_RS11065
- description: ATP-dependent Clp protease ATP-binding subunit
- length: 810
- theoretical pI: 5.8631
- theoretical MW: 90153.3
- GRAVY: -0.335679
⊟Function[edit | edit source]
- ⊞TIGRFAM: Protein fate Protein folding and stabilization ATP-dependent chaperone protein ClpB (TIGR03346; HMM-score: 867.1)Protein fate Degradation of proteins, peptides, and glycopeptides ATP-dependent Clp protease ATP-binding subunit ClpA (TIGR02639; HMM-score: 759.8)and 25 more
- TheSEED: see SPAP_2238
- ⊞PFAM: P-loop_NTPase (CL0023) AAA_2; AAA domain (Cdc48 subfamily) (PF07724; HMM-score: 191.2)and 41 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_001109697 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MNYSKALNECIESAYMVAGHFGARYLESWHLLIAMSNHSYSVAGATLNDYPYEMDRLEEVALELTETDYSQDETFTELPFSRRLQVLFDEAEYVASVVHAKVLGTEHVLYAILHDGNALATRILERAGFSYEDKKDQVKIAALRRNLEERAGWTREDLKALRQRHRTVADKQNSMANMMGMPQTPSGGLEDYTHDLTEQARSGKLEPVIGRDKEISRMIQILSRKTKNNPVLVGDAGVGKTALALGLAQRIASGDVPAEMAKMRVLELDLMNVVAGTRFRGDFEERMNNIIKDIEEDGQVILFIDELHTIMGSGSGIDSTLDAANILKPALARGTLRTVGATTQEEYQKHIEKDAALSRRFAKVTIEEPSVADSMTILQGLKATYEKHHRVQITDEAVETAVKMAHRYLTSRHLPDSAIDLLDEAAATVQNKAKHVKADDSDLSPADKALMDGKWKQAAQLIAKEEEVPVYKDLVTESDILTTLSRLSGIPVQKLTQTDAKKYLNLEAELHKRVIGQDQAVSSISRAIRRNQSGIRSHKRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQVLDDGVLTDSKGRKVDFSNTIIIMTSNLGATALRDDKTVGFGAKDIRFDQENMEKRMFEELKKAYRPEFINRIDEKVVFHSLSSDHMQEVVKIMVKPLVASLAEKGIDLKLQASALKLLANQGYDPEMGARPLRRTLQTEVEDKLAELLLKGDLVAGSTLKIGVKAGQLKFDIA
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_2022 PneumoExpress