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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 03-SEP-2019
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae ASP0581
- locus tag: ASP0581_03060 [new locus tag: EL334_RS01650 ]
- pan locus tag?: PNEUPAN001090000
- symbol: celA_1
- pan gene symbol?: celA
- synonym:
- product: 6-phospho-beta-glucosidase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: ASP0581_03060 [new locus tag: EL334_RS01650 ]
- symbol: celA_1
- product: 6-phospho-beta-glucosidase
- replicon: chromosome
- strand: +
- coordinates: 290036..291472
- length: 1437
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: AP019192 (290036..291472) NCBI
- BioCyc: see EL334_RS01650
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0277 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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1381ATGACTACTTTTAAAGATGGATTTTTATGGGGTGGTGCTGTTGCTGCTCATCAACTTGAA
GGTGGATGGCAAGAAGGTGGCAAGGGAATTAGTGTTGCTGATGTTATGACTGCTGGTCGT
CATGGAGTAGCTCGTGAAATTACTTTGGGAGTTTTAGAGGGTAAATATTATCCAAATCAT
GAGGCGATAGATTTTTATCATCGTTATAAAGAAGACATAGCACTTTTTGCTGAAATGGGA
TTCAAGTGCTTCCGTACCTCTATTGCATGGACACGTATCTTTCCAAAAGGTGATGAGTTA
GAGCCGAATGAAGAAGGATTACAGTTTTATGATAATCTTTTTGATGAATGCTTAAAGAAT
GGTATTGAACCTGTCATCACTCTATCTCATTTTGAAATGCCTTATCACTTAGTGACCGAA
TATGGTGGTTGGAAAAATAGGAAATTGATTGATTTCTTTGCTCGTTTTGCAGAAGTCGTA
TTTAAACGTTACAAAGATAAGGTTAAATATTGGATGACTTTCAATGAAATCAATAATCAA
GCGAATTATCAGGAAGATTTTGCACCATTTACTAACTCAGGTATTGTATATGAGGAAGGT
GATAATAGAGAAGCAATTATGTATCAAGCAGCACATTACGAATTAGTTGCTTCTGCACGA
GCTGTAAAAATTGGTCATGAGATTAATCCAGATTTTCAAATAGGTTGTATGATTGCGATG
TGTCCAATTTATCCAGTTACTTGCAATCCTAAGGATATCTTAATGGCAATGAAAGCTATG
CAGAAGCGTTATTATTTTGCTGATGTGCATGTTTTAGGTAAATATCCTGAGCATATTTTC
AAGTATTGGGAACGAAAAGGTATTTCAGTTGATTTTACTGACCAGGATAAAGAAGATTTA
CTTGGTGGGACTGTAGATTACATTGGTTTCAGTTACTATATGTCCTTTGCTATAGACTCT
CATCGTGAAAATAATCCTTATTTTGATTATCTTGAAACAGAAGATTTAGTGAAAAATAAT
TATGTTAAGGCTTCTGAATGGGAGTGGCAAATTGATCCAGAAGGTTTACGTTATGCGTTA
AATTGGTTTACAGACCACTATCACTTACCACTCTTTATTGTTGAAAATGGTTTTGGAGCT
ATAGATCAAGTTGCAGCAGATGGTATGGTACATGATGATTATAGAATTGAATATCTAGGT
GCCCATATTCGTGAAATGAAAAAGGCTGTAGTTGAAGATGGTGTTGATTTAATGGGTTAT
ACTCCATGGGGATGTATTGATTTGGTTTCAGCTGGTACCGGTGAAATGCGGAAACGTTAT
GGTTTTATTTATGTAGATAAAGATGACAATGGGAAGGGAAGTTATAATCGTTCCCCGAAA
AAATCTTTTGGCTGGTATAAGGAAGTTATTTCATCTAACGGTGAATCAGTAGAATAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: ASP0581_03060 [new locus tag: EL334_RS01650 ]
- symbol: CelA_1
- description: 6-phospho-beta-glucosidase
- length: 478
- theoretical pI: 4.85977
- theoretical MW: 55237.9
- GRAVY: -0.42636
⊟Function[edit | edit source]
- TIGRFAM: beta-galactosidase (TIGR03356; HMM-score: 293.6)and 1 moreEnergy metabolism Biosynthesis and degradation of polysaccharides 6-phospho-beta-galactosidase (TIGR01233; EC 3.2.1.85; HMM-score: 207.6)
- TheSEED: data available for D39, TIGR4
- PFAM: Glyco_hydro_tim (CL0058) Glyco_hydro_1; Glycosyl hydrolase family 1 (PF00232; HMM-score: 442.2)and 2 moreCellulase; Cellulase (glycosyl hydrolase family 5) (PF00150; HMM-score: 24.9)no clan defined ArfA; Alternative ribosome-rescue factor A (PF03889; HMM-score: 11.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.97
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 0.01
- Extracellular Score: 0.02
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.035543
- TAT(Tat/SPI): 0.008672
- LIPO(Sec/SPII): 0.010977
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: BBG80828 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MTTFKDGFLWGGAVAAHQLEGGWQEGGKGISVADVMTAGRHGVAREITLGVLEGKYYPNHEAIDFYHRYKEDIALFAEMGFKCFRTSIAWTRIFPKGDELEPNEEGLQFYDNLFDECLKNGIEPVITLSHFEMPYHLVTEYGGWKNRKLIDFFARFAEVVFKRYKDKVKYWMTFNEINNQANYQEDFAPFTNSGIVYEEGDNREAIMYQAAHYELVASARAVKIGHEINPDFQIGCMIAMCPIYPVTCNPKDILMAMKAMQKRYYFADVHVLGKYPEHIFKYWERKGISVDFTDQDKEDLLGGTVDYIGFSYYMSFAIDSHRENNPYFDYLETEDLVKNNYVKASEWEWQIDPEGLRYALNWFTDHYHLPLFIVENGFGAIDQVAADGMVHDDYRIEYLGAHIREMKKAVVEDGVDLMGYTPWGCIDLVSAGTGEMRKRYGFIYVDKDDNGKGSYNRSPKKSFGWYKEVISSNGESVE
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0277 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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