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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 09-DEC-2016
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae SP49
- locus tag: BMJ42_01864 [new locus tag: BMJ42_RS09820 ]
- pan locus tag?: PNEUPAN003346000
- symbol: galT
- pan gene symbol?: galT-2
- synonym:
- product: galactose-1-phosphate uridylyltransferase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: BMJ42_01864 [new locus tag: BMJ42_RS09820 ]
- symbol: galT
- product: galactose-1-phosphate uridylyltransferase
- replicon: chromosome
- strand: -
- coordinates: 1785777..1787258
- length: 1482
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP018136 (1785777..1787258) NCBI
- BioCyc: see BMJ42_RS09820
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1633 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1441GTGACCTTAGTAGATAAATTTGTAACACATGTCATTTCTGAAAGTTCATTTGAGGAAATG
GATCGAATCTACCTGACAAACCGTGTTTTGGCACGAGTGGGAGAAGGTGTTTTGGAAGTT
GAGACCAATCTGGATAAATTGATTGACCTCAAGGACCAGCTAGTTGAGGAAGCCGTTCGA
TTAGAGACGATTGAGGATAGTCAGACTGCGCGTGAAATCCTTGGTACTGAACTGATGGAC
TTGGTGACTCCTTGTCCGAGTCAGGTCAATCGTGACTTCTGGGAAGCCTATGCCTACTCT
CCTGAGCAAGCGATAGAGGATTTTTATCAACTCAGTCGGAAAAATGACTACATCAAACTC
AAGGCCATTGCTAAAAATATCGCTTATCGTGTTCCATCTGATTATGGAGAACTTGAAATT
ACCATCAATCTCTCTAAGCCTGAAAAGGATCCGAAAGAGATTGCGGTAGCCAAGTTGGTG
CAAGCTAGTAATTATCCTCAGTGTCAACTTTGTTTAGAGAATGAGGGTTACCATGGTCGG
GTCAACCACCCAGCTCGCAGCAACCACCGGATTATCCGTTTTGAAATGGTTGGTCAGGAA
TGGGGGTTCCAGTATTCGCCCTATGCTTACTTTAATGAGCATTGTATCTTTTTAGATGGC
CAGCATCGTCCCATGGCCATTAGTCGTCAGAGTTTTGAACGTCTGTTGGCTATCGTAGAG
CAGTTTCCAGGATATTTTGCTGGATCTAATGCCGACCTGCCGATTGTGGGGGGCTCTATT
CTAACTCATGATCATTATCAGGGAGGCCGTCACGTATTTCCTATGGAATTGGCTCCCTTG
CAAAAGACCTTCCGATTTGCTGGTTTTGAGCAGGTCAAGGCTGGAATTATCAAGTGGCCA
ATGTCTGTCCTACGCTTGACTTCGGATTCCAAAGAGGATTTGATTAACTTAGCTGATAAG
ATTTTCCAGGAATGGCGTCAGTATTCAGATTCTAGTGTGCAGATTTTAGCAGAGACAGAC
GGGACACCGCATCACACCATCACACCAATAGCGCGTAAGCGTGATGGACAGTTTGAGTTG
GACTTGGTCTTGCGAGACAATCAGACTTCAGCAGAGCATCCTGATGGCATCTATCATCCC
CACAAGGATGTCCAACATATCAAGAAGGAAAATATCGGCTTGATTGAGGTCATGGGCTTG
GCAATCTTGCCACCACGTCTGAAAGAAGAAGTGGAGCAAGTCGCTAGCTATCTTGTAGGA
GAAGCTGTTACAGTTGCCGATTATCATCAGGAGTGGGCAGACCAACTCAAATCCCAACAT
CCAGACCTAACGGATAAAGAAAAAGCCCTTGCAATCGTCAAGGACTCTGTGGGTGCTATC
TTTGTGCGTGTACTTGAGGATGCAGGAGTCTACAAGCAGACAGAACAAGGGCAGACAGCC
TTTATGCGCTTTGTGGAACATGTCGGAATTTCACTAGACTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: BMJ42_01864 [new locus tag: BMJ42_RS09820 ]
- symbol: GalT
- description: galactose-1-phosphate uridylyltransferase
- length: 493
- theoretical pI: 4.98549
- theoretical MW: 56216.2
- GRAVY: -0.367748
⊟Function[edit | edit source]
- reaction: EC 2.7.7.10? ExPASyUTP--hexose-1-phosphate uridylyltransferase UTP + alpha-D-galactose 1-phosphate = diphosphate + UDP-alpha-D-galactose
- TIGRFAM: Energy metabolism Sugars galactose-1-phosphate uridylyltransferase (TIGR01239; EC 2.7.7.12; HMM-score: 768.2)
- TheSEED: data available for D39, Hungary19A-6, TIGR4
- PFAM: HIT (CL0265) GalP_UDP_transf; Galactose-1-phosphate uridyl transferase, N-terminal domain (PF01087; HMM-score: 134.1)GalP_UDP_tr_C; Galactose-1-phosphate uridyl transferase, C-terminal domain (PF02744; HMM-score: 131.1)and 1 moreDUF4922; Domain of unknown function (DUF4922) (PF16269; HMM-score: 13.5)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001756
- TAT(Tat/SPI): 0.000125
- LIPO(Sec/SPII): 0.000208
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: APJ31145 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MTLVDKFVTHVISESSFEEMDRIYLTNRVLARVGEGVLEVETNLDKLIDLKDQLVEEAVRLETIEDSQTAREILGTELMDLVTPCPSQVNRDFWEAYAYSPEQAIEDFYQLSRKNDYIKLKAIAKNIAYRVPSDYGELEITINLSKPEKDPKEIAVAKLVQASNYPQCQLCLENEGYHGRVNHPARSNHRIIRFEMVGQEWGFQYSPYAYFNEHCIFLDGQHRPMAISRQSFERLLAIVEQFPGYFAGSNADLPIVGGSILTHDHYQGGRHVFPMELAPLQKTFRFAGFEQVKAGIIKWPMSVLRLTSDSKEDLINLADKIFQEWRQYSDSSVQILAETDGTPHHTITPIARKRDGQFELDLVLRDNQTSAEHPDGIYHPHKDVQHIKKENIGLIEVMGLAILPPRLKEEVEQVASYLVGEAVTVADYHQEWADQLKSQHPDLTDKEKALAIVKDSVGAIFVRVLEDAGVYKQTEQGQTAFMRFVEHVGISLD
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1633 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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