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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 19-APR-2025

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae Xen35
  • locus tag: CXP32_RS06985 [old locus tag: CXP32_06985 ]
  • pan locus tag?: PNEUPAN002686000
  • symbol: CXP32_RS06985
  • pan gene symbol?: —
  • synonym:
  • product: DUF948 domain-containing protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: CXP32_RS06985 [old locus tag: CXP32_06985 ]
  • symbol: CXP32_RS06985
  • product: DUF948 domain-containing protein
  • replicon: chromosome
  • strand: -
  • coordinates: 1331224..1331607
  • length: 384
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NZ_CP025256 (1331224..1331607) NCBI
  • BioCyc:
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_1242 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    ATGTTAGAAGTTGCATATATTCTTGTTGCCCTAGCTTTGATTGTCTTTTTGGTCTATCTG
    ATCATTACTGTACAAAAGCTTGGTCGTGTCATCGATGAAACAGAAAAGACGATTAAAACC
    TTGACTTCAGATGTGGATGTGACCTTGCATCACACCAATGAGTTGTTGGCTAAGGTCAAT
    GTCTTGGCAGATGATATCAATGTCAAGGTGGCTACGATTGATCCACTCTTCAGTGCTGTT
    GCAGATTTATCTCTATCTGTTTCAGACCTCAATGACCATGCGCGTGTCTTGAGCAAGAAA
    GCTTCATCAGCTGGTTCAAAAACACTCAAGACTGGTGCAAGTCTGTCAGCTCTTCGTCTT
    GCAAGTAAATTTTTCAAAAAATAA
    60
    120
    180
    240
    300
    360
    384

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: CXP32_RS06985 [old locus tag: CXP32_06985 ]
  • symbol: CXP32_RS06985
  • description: DUF948 domain-containing protein
  • length: 127
  • theoretical pI: 9.55892
  • theoretical MW: 13707
  • GRAVY: 0.489764

⊟Function[edit | edit source]

  • TIGRFAM:
    integral membrane protein (TIGR04561; HMM-score: 15.1)
    heavy metal sensor kinase (TIGR01386; EC 2.7.13.3; HMM-score: 14.9)
  • TheSEED: data available for D39, Hungary19A-6, TIGR4
  • PFAM:
    no clan defined DUF948; Bacterial protein of unknown function (DUF948) (PF06103; HMM-score: 88.5)
    and 7 more
    BORCS7; BLOC-1-related complex sub-unit 7 (PF16088; HMM-score: 16.9)
    Laminin_II; Laminin Domain II (PF06009; HMM-score: 15.5)
    TPR (CL0020) DUF6377; Domain of unknown function (DUF6377) (PF19904; HMM-score: 15.3)
    no clan defined BLOC1_2; Biogenesis of lysosome-related organelles complex-1 subunit 2 (PF10046; HMM-score: 13.9)
    Effector_1; Effector from type III secretion system (PF04518; HMM-score: 13)
    FtsL (CL0225) DivIC; Septum formation initiator (PF04977; HMM-score: 12.7)
    OML_zippers (CL0590) LPP; Lipoprotein leucine-zipper (PF04728; HMM-score: 11.7)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: unknown (no significant prediction)
    • Cytoplasmic Score: 2.5
    • Cytoplasmic Membrane Score: 2.5
    • Cellwall Score: 2.5
    • Extracellular Score: 2.5
    • Internal Helix: 1
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9969
    • Cell wall & surface Score: 0.0001
    • Extracellular Score: 0.0029
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.032626
    • TAT(Tat/SPI): 0.000341
    • LIPO(Sec/SPII): 0.005092
  • predicted transmembrane helices (TMHMM): 1

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_000895040 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MLEVAYILVALALIVFLVYLIITVQKLGRVIDETEKTIKTLTSDVDVTLHHTNELLAKVNVLADDINVKVATIDPLFSAVADLSLSVSDLNDHARVLSKKASSAGSKTLKTGASLSALRLASKFFKK

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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