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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 25-OCT-2024

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae TCH8431/19A
  • locus tag: HMPREF0837_RS04715 [old locus tag: HMPREF0837_10980 ]
  • pan locus tag?: PNEUPAN001605000
  • symbol: divIB
  • pan gene symbol?: divIB
  • synonym:
  • product: cell division protein DivIB

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: HMPREF0837_RS04715 [old locus tag: HMPREF0837_10980 ]
  • symbol: divIB
  • product: cell division protein DivIB
  • replicon: chromosome
  • strand: +
  • coordinates: 906044..907264
  • length: 1221
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_014251 (906044..907264) NCBI
  • BioCyc: HMPREF0837_RS04715 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_0600 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    ATGTCAAAAGATAAGAAAAATGAGGACAAAGAAATCCTCGAAGAATTGAAAGAGTTATCA
    GAATGGCAGAAACGAAACCAAGAATATCTAAAAAAGAAGGCTGAAGAAGAAGCGGCTCTA
    GCTGAGGAGAAGGAAAAGGAAAGACAAGCTCGGATGGGAGAAGAATCTGAGAAGTCAGAG
    GACAAACAGGACCAGGAGAGTGAAACAGACCAGGAAGATTCAGAATCAGCTAAGGAAAAG
    TCTGAAGAAAAAGTAGCATCCTCAGAGGCTGACAAAGAGAAAGAAGAGAAAGAAGAATCA
    GAGTCTAAAGAGAAGGAGGAACAGGATAAAAAGCTTGCTAAAAAGGCTATAAAGGAAAAA
    CCAGCCAAAGCAAAGATTCCTGGTATCCATATCTTGCGAGCCTTCACGATTTTATTTCCA
    AGTCTGCTTTTATTGATTGTCTCTGCCTACTTGCTCAGTCCTTATGCGACCATGAAAGAT
    ATTCGTGTTGAGGGAACGGTGCAAACTACAGCTGATGATATTCGACAGGCTTCAGGCATT
    CAGGATTCGGATTATACGATTAACCTTCTGCTAGACAAGGCAAAATATGAAAAGCAGATT
    AAGTCTAACTATTGGGTTGAATCAGCTCAACTTGTCTATCAATTTCCAACTAAGTTCACT
    ATTAAGGTCAAGGAATATGATATTGTGGCCTACTATATTTCTGGTGAAAATCATTATCCT
    ATTCTTTCCAGTGGTCAGCTTGAGACTAGTTCTGTGAGCCTGAACAGTTTACCAGAAACT
    TATTTATCAGTTCTCTTTAATGATAGTGAACAAATCAAGGCTTTTGTCTCAGAACTTGCT
    CAAATTAGCCCAGAACTCAAGGCGGCTATCCAAAAGGTGGAATTAGCCCCAAGCAAGGTG
    ACATCCGATTTAATTCGATTGACCATGAATGATTCGGACGAAGTCTTGGTTCCTCTATCT
    GAAATGAGTAAGAAACTGCCTTATTATAGTAAGATTAAACCACAATTGTCAGAACCGAGT
    GTGATTGACATGGAAGCTGGAATTTACAGTTACACTGTGGCGGATAAATTAATTATGGAA
    GCTGAGGAAAAAGCCAAACAAGAGGCTAAGGAAGCCGAGAAAAAACAGGAAGAAGAACAG
    AAACGTTTAGAAGAAGAACAGAAAAAACAAGAGGAAGAGAGCAATCGAAATCAAACGACC
    CAGCGCTCATCGCGTCGCTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1221

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: HMPREF0837_RS04715 [old locus tag: HMPREF0837_10980 ]
  • symbol: DivIB
  • description: cell division protein DivIB
  • length: 406
  • theoretical pI: 4.61206
  • theoretical MW: 46657
  • GRAVY: -0.962315

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Cations and iron carrying compounds ferrous iron transport protein B (TIGR00437; HMM-score: 5)
  • TheSEED: see HMPREF0837_10980
  • PFAM:
    POTRA (CL0191) POTRA_1; POTRA domain, FtsQ-type (PF08478; HMM-score: 65.1)
    and 8 more
    no clan defined Saf4_Yju2; Saf4/Yju2 protein (PF04502; HMM-score: 15.3)
    Otopetrin; Otopetrin (PF03189; HMM-score: 14.1)
    Peptidase_AD (CL0130) Presenilin; Presenilin (PF01080; HMM-score: 11.4)
    no clan defined RR_TM4-6; Ryanodine Receptor TM 4-6 (PF06459; HMM-score: 9.2)
    Golgi_traff (CL0456) Hid1; High-temperature-induced dauer-formation protein (PF12722; HMM-score: 8.1)
    no clan defined Na_trans_assoc; Sodium ion transport-associated (PF06512; HMM-score: 7.7)
    DMT (CL0184) Zip; ZIP Zinc transporter (PF02535; HMM-score: 7.1)
    no clan defined Mat89Bb; Cell cycle and development regulator Mat89Bb (PF10221; HMM-score: 5.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cellwall
    • Cytoplasmic Score: 0.11
    • Cytoplasmic Membrane Score: 0.93
    • Cellwall Score: 8.19
    • Extracellular Score: 0.77
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.0001
    • Cytoplasmic Membrane Score: 0.9955
    • Cell wall & surface Score: 0.0001
    • Extracellular Score: 0.0043
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.006608
    • TAT(Tat/SPI): 0.00309
    • LIPO(Sec/SPII): 0.002274
  • predicted transmembrane helices (TMHMM): 1

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_000031150 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MSKDKKNEDKEILEELKELSEWQKRNQEYLKKKAEEEAALAEEKEKERQARMGEESEKSEDKQDQESETDQEDSESAKEKSEEKVASSEADKEKEEKEESESKEKEEQDKKLAKKAIKEKPAKAKIPGIHILRAFTILFPSLLLLIVSAYLLSPYATMKDIRVEGTVQTTADDIRQASGIQDSDYTINLLLDKAKYEKQIKSNYWVESAQLVYQFPTKFTIKVKEYDIVAYYISGENHYPILSSGQLETSSVSLNSLPETYLSVLFNDSEQIKAFVSELAQISPELKAAIQKVELAPSKVTSDLIRLTMNDSDEVLVPLSEMSKKLPYYSKIKPQLSEPSVIDMEAGIYSYTVADKLIMEAEEKAKQEAKEAEKKQEEEQKRLEEEQKKQEEESNRNQTTQRSSRR

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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