Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001605000
- symbol?: divIB
- synonym:
- description?: cell division protein DivIB
- cell division protein DivIB
- putative cell division protein DivIB/FtsQ
- Cell division septal protein
- cell division protein FtsQ
- cell division protein FtsQ/DivIB
- POTRA domain, FtsQ-type family protein
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 2042470..2043674
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS03450 (divIB)
(19F)
ATCC 49619:
EL263_RS03400 (divIB)
(23F)
ATCC 700669:
SPN23F_RS03185 (divIB)
(19F)
G54:
SPG_RS03190 (divIB)
(1)
gamPNI0373:
HMPREF1038_RS03515 (divIB)
(3)
HU-OH:
EL271_RS03195 (divIB)
(19A)
Hu15:
SPNHU15_RS03465 (divIB)
(19A)
Hu17:
SPNHU17_RS03405 (divIB)
(1)
INV104:
INV104_RS03380 (divIB)
(14)
INV200:
SPNINV200_RS03255 (divIB)
(14)
JJA:
SPJ_RS03200 (divIB)
(19F)
MDRSPN001:
MDRSPN_RS07190 (divIB)
(1)
NCTC7465:
AT689_RS10290 (divIB)
(2)
NCTC7466:
DQM66_RS03240 (divIB)
(4)
NU83127:
EL277_RS03480 (divIB)
(19A)
SP49:
BMJ42_RS03970 (divIB)
(1)
SPN032672:
SPN032672_RS09640 (divIB)
(3)
SPN034156:
SPN034156_RS09305 (divIB)
(3)
SPN034183:
SPN034183_RS03395 (divIB)
(3)
SPN994038:
SPN994038_RS03315 (divIB)
(3)
SPN994039:
SPN994039_RS03315 (divIB)
(3)
SPNA45:
SPNA45_RS05765 (divIB)
(19F)
ST556:
MYY_RS03765 (divIB)
(19F)
Taiwan19F-14:
SPT_RS03545 (divIB)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MSKDKKNEDKETLEELKELSEWQKRNQEYLKKKAEEEAALAEEKEKERQARMGEESEKSE
D39 MSKDKKNEDKETLEELKELSEWQKRNQEYLKKKAEEEVALAEEKEKERQARMGEESEKSE
D39V MSKDKKNEDKETLEELKELSEWQKRNQEYLKKKAEEEVALAEEKEKERQARMGEESEKSE
Hungary19A-6 MSKDKKNEDKEILEELKELSEWQKRNQEYLKKKAEEEAALAEEKEKERQARMGEESEKSE
EF3030 MSKDKKNEDKETLEELKELSEWQKRNQEYLKKKAEEEAALAEEKEKERQARMGEESEKSE
*********** *************************.**********************
TIGR4 DKQDQESETDQEDSESAKEESEEKVASSEADKEKEEKEEPESKEKEEQDKKLAKKATKEK
D39 DKQDQESETDQEDSESAKEESEEKVASSEADK---EKEEPESKEKEEQDKKLAKKATKEK
D39V DKQDQESETDQEDSESAKEESEEKVASSEADK---EKEEPESKEKEEQDKKLAKKATKEK
Hungary19A-6 DKQDQESETDQEDSESAKEESEEKVASSEADKEKEEKEESESKEKEEQDKKLAKKATKEK
EF3030 DKQDQESETDQKDSESAKEESEEKVASSEADKEKEEKEEPESKEKEEQDKKLAKKATKEK
***********:******************** ****.********************
TIGR4 PAKAKIPGIHILRAFTILFPSLLLLFVSAYLLSPYATMKDIRVEGTVQTTADDIRQASGI
D39 PAKAKIPGIHILRAFTILFPSLLLLIVSAYLLSPYATMKDIRVEGTVQTTADDIRQASGI
D39V PAKAKIPGIHILRAFTILFPSLLLLIVSAYLLSPYATMKDIRVEGTVQTTADDIRQASGI
Hungary19A-6 PAKAKIPGIHILRAFTILFPSLLLLIVSAYLLSPYATMKDIRVEGTVQTTADDIRQASGI
EF3030 PAKAKIPGIHILRAFTILFPSLLLLIVSAYLLSPYATMKDIRVEGTVQTTADDIRQASGI
*************************:**********************************
TIGR4 QDSDYTINLLLDKAKYEKQIKSNYWVESAQLVYQFPTKFTIKVKEYDIVAYYISGENHYP
D39 QDSDYTINLLLDKAKYEKQIKSNYWVESAQLVYQFPTKFTIKVKEYDIVAYYISGENHYP
D39V QDSDYTINLLLDKAKYEKQIKSNYWVESAQLVYQFPTKFTIKVKEYDIVAYYISGENHYP
Hungary19A-6 QDSDYTINLLLDKAKYEKQIKSNYWVESAQLVYQFPTKFTIKVKEYDIVAYYISGENHYP
EF3030 QDSDYTINLLLDKAKYEKQIKSNYWVESAQLVYQFPTKFTIKVKEYDIVAYYISGENHYP
************************************************************
TIGR4 ILSSGQLETSSVSLNSLPETYLSVLFNDSEQIKVFVSELAQISPELKAAIQKVELAPSKV
D39 ILSSGQLETSSVSLNSLPETYLSVLFNDSEQIKVFVSELAQISPELKAAIQKVELAPSKV
D39V ILSSGQLETSSVSLNSLPETYLSVLFNDSEQIKVFVSELAQISPELKAAIQKVELAPSKV
Hungary19A-6 ILSSGQLETSSVSLNSLPETYLSVLFNDSEQIKVFVSELAQISPELKATIQKVELAPSKV
EF3030 ILSSGQLETSSVSLNSLPETYLSVLFNDSEQIKVFVSELAQISPELKAAIQKVELAPSKV
************************************************:***********
TIGR4 TSDLIRLTMNDSDEVLVPLSEMSKKLPYYSKIKPQLSEPSVVDMEAGIYSYTVADKLIME
D39 TSDLIRLTMNDSDEVLVPLSEMSKKLPYYSKIKPQLSEPSVVDMEAGIYSYTVADKLIME
D39V TSDLIRLTMNDSDEVLVPLSEMSKKLPYYSKIKPQLSEPSVVDMEAGIYSYTVADKLIME
Hungary19A-6 TSDLIRLTMNDSDEVLVPLSEMSKKLPYYSKIKPQLSEPSVVDMEAGIYSYTVADKLIME
EF3030 TSDLIRLTMNDSDEVLVPLSEMSKKLPYYSKIKPQLSEPSVIDMEAGVYSYTVADKLIME
*****************************************:*****:************
TIGR4 AEEKAKQEAKEAEKKQ-------EEEQKKQEEESNRNQTTQRSSRR
D39 AEEKAKQEAKEAEKKQ-------EEEQKKQEEESNRNQTNQRSSRR
D39V AEEKAKQEAKEAEKKQ-------EEEQKKQEEESNRNQTNQRSSRR
Hungary19A-6 AEEKAKQEAKEAEKKQ-------EEEQKKQEEESN-----------
EF3030 AEEKAKKEAEEAEKRQEEERKRLEEEQKKQEEESNRNQTTQRSSRR
******:**:****:* ************