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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 12-FEB-2025
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae NU83127
- locus tag: EL277_RS03480 [old locus tag: SPNU_0650 ]
- pan locus tag?: PNEUPAN001605000
- symbol: divIB
- pan gene symbol?: divIB
- synonym:
- product: cell division protein DivIB
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: EL277_RS03480 [old locus tag: SPNU_0650 ]
- symbol: divIB
- product: cell division protein DivIB
- replicon: chromosome
- strand: +
- coordinates: 667184..668383
- length: 1200
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NZ_AP018936 (667184..668383) NCBI
- BioCyc: EL277_RS03480 BioCyc
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0600 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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1141ATGTCAAAAGATAAGAAAAATGAGGACAAAGAAACCCTCGAAGAATTGAAAGAGTTATCA
GAATGGCAGAAACGAAACCAAGAATATCTAAAAAAGAAGGCTGAAGAAGAGGCGGCTCTA
GCTGAGGAGAAGGAAAAGGAAAGACAAGCTCGAATGGGAGAAGAATCTGAGAAGTCAGAG
GATAAACAGGACCAGGAGAGTGAAACAGACCAGGAAGATTCAGAATCAGCTAAGGAAGAG
TCTGAAGAAAAAGTAGCATCCTCAGAGGCTGACAAAGAGAAAGAAGAGAAAGAAGAACCA
GAGTCTAAAGAGAAGGAGGAACAGGATAAAAAGCTTGCTAAAAAGGCTACAAAGGAAAAA
CCAGCCAAAGCAAAGATTCCTGGTATCCATATCTTGCGAGCCTTCACGATTTTATTTCCA
AGTCTGCTTCTATTGTTTGTCTCTGCCTACTTGCTCAGTCCTTATGCGACCATGAAAGAT
ATTCGTGTTGAGGGAACGGTGCAAACTACAGCTGATGATATTCGACAGGCTTCAGGCATT
CAGGATTCGGATTATACGATTAACCTTCTGCTAGACAAGGCAAAATATGAAAAGCAGATT
AAGTCTAACTATTGGGTTGAATCAGCTCAACTTGTCTATCAATTTCCAACTAAGTTCACT
ATTAAGGTCAAGGAATATGATATTGTGGCCTACTATATTTCTGGTGAAAATCATTATCCT
ATTCTTTCCAGTGGTCAGCTTGAGACTAGTTCTGTGAGTCTGAACAGTTTACCAGAAACT
TATTTATCAGTTCTCTTTAATGATAGTGAACAAATCAAAGTTTTTGTCTCAGAACTTGCT
CAAATTAGCCCAGAACTCAAGGCGGCTATCCAAAAGGTGGAATTAGCCCCAAGCAAGGTG
ACATCCGATTTAATTCGATTGACCATGAATGATTCGGACGAAGTCTTGGTTCCTCTATCT
GAAATGAGTAAGAAACTGCCATATTACAGTAAGATTAAGCCTCAATTGTCAGAACCGAGT
GTGGTCGACATGGAAGCTGGAATCTACAGCTACACTGTGGCGGATAAATTAATTATGGAA
GCTGAGGAAAAAGCCAAACAAGAGGCCAAGGAAGCTGAGAAAAAACAAGAAGAAGAACAG
AAAAAACAAGAGGAAGAGAGCAATCGAAACCAAACGACCCAGCGTTCATCGCGTCGCTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: EL277_RS03480 [old locus tag: SPNU_0650 ]
- symbol: DivIB
- description: cell division protein DivIB
- length: 399
- theoretical pI: 4.56912
- theoretical MW: 45778.9
- GRAVY: -0.958647
⊟Function[edit | edit source]
- TIGRFAM: Transport and binding proteins Cations and iron carrying compounds ferrous iron transport protein B (TIGR00437; HMM-score: 6.4)and 1 morepullulanase, extracellular (TIGR02102; HMM-score: 3.7)
- TheSEED: data available for D39, Hungary19A-6, TIGR4
- PFAM: POTRA (CL0191) POTRA_1; POTRA domain, FtsQ-type (PF08478; HMM-score: 64.9)and 7 moreno clan defined Saf4_Yju2; Saf4/Yju2 protein (PF04502; HMM-score: 13.5)Otopetrin; Otopetrin (PF03189; HMM-score: 11.3)Peptidase_AD (CL0130) Presenilin; Presenilin (PF01080; HMM-score: 10.2)no clan defined Na_trans_assoc; Sodium ion transport-associated (PF06512; HMM-score: 8.5)SAPS; SIT4 phosphatase-associated protein (PF04499; HMM-score: 7.2)TORC_M; Transducer of regulated CREB activity middle domain (PF12885; HMM-score: 6.5)DMT (CL0184) Zip; ZIP Zinc transporter (PF02535; HMM-score: 5.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cellwall
- Cytoplasmic Score: 0.11
- Cytoplasmic Membrane Score: 0.93
- Cellwall Score: 8.19
- Extracellular Score: 0.77
- Internal Helices: 0
- DeepLocPro: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 0.9961
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.0037
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.00708
- TAT(Tat/SPI): 0.003615
- LIPO(Sec/SPII): 0.002379
- predicted transmembrane helices (TMHMM): 1
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000031159 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MSKDKKNEDKETLEELKELSEWQKRNQEYLKKKAEEEAALAEEKEKERQARMGEESEKSEDKQDQESETDQEDSESAKEESEEKVASSEADKEKEEKEEPESKEKEEQDKKLAKKATKEKPAKAKIPGIHILRAFTILFPSLLLLFVSAYLLSPYATMKDIRVEGTVQTTADDIRQASGIQDSDYTINLLLDKAKYEKQIKSNYWVESAQLVYQFPTKFTIKVKEYDIVAYYISGENHYPILSSGQLETSSVSLNSLPETYLSVLFNDSEQIKVFVSELAQISPELKAAIQKVELAPSKVTSDLIRLTMNDSDEVLVPLSEMSKKLPYYSKIKPQLSEPSVVDMEAGIYSYTVADKLIMEAEEKAKQEAKEAEKKQEEEQKKQEEESNRNQTTQRSSRR
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0600 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]