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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 31-JAN-2014

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae TIGR4
  • locus tag: SP_0690 [new locus tag: SP_RS03380 ]
  • pan locus tag?: PNEUPAN001605000
  • symbol: divIB
  • pan gene symbol?: divIB
  • synonym:
  • product: cell division protein DivIB

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SP_0690 [new locus tag: SP_RS03380 ]
  • symbol: divIB
  • product: cell division protein DivIB
  • replicon: chromosome
  • strand: +
  • coordinates: 661717..662916
  • length: 1200
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    ATGTCAAAAGATAAGAAAAATGAGGACAAAGAAACCCTCGAAGAATTGAAAGAGTTATCA
    GAATGGCAGAAACGAAACCAAGAATATCTAAAAAAGAAGGCTGAAGAAGAGGCGGCTCTA
    GCTGAGGAGAAGGAAAAGGAAAGACAAGCTCGAATGGGAGAAGAATCTGAGAAGTCAGAG
    GATAAACAGGACCAGGAGAGTGAAACAGACCAGGAAGATTCAGAATCAGCTAAGGAAGAG
    TCTGAAGAAAAAGTAGCATCCTCAGAGGCTGACAAAGAGAAAGAAGAGAAAGAAGAACCA
    GAGTCTAAAGAGAAGGAGGAACAGGATAAAAAGCTTGCTAAAAAGGCTACAAAGGAAAAA
    CCAGCCAAAGCAAAGATTCCTGGTATCCATATCTTGCGAGCCTTCACGATTTTATTTCCA
    AGTCTGCTTCTATTGTTTGTCTCTGCCTACTTGCTCAGTCCTTATGCGACCATGAAAGAT
    ATTCGTGTTGAGGGAACGGTGCAAACTACAGCTGATGATATTCGACAGGCTTCAGGCATT
    CAGGATTCGGATTATACGATTAACCTTCTGCTAGACAAGGCAAAATATGAAAAGCAGATT
    AAGTCTAACTATTGGGTTGAATCAGCTCAACTTGTCTATCAATTTCCAACTAAGTTCACT
    ATTAAGGTCAAGGAATATGATATTGTGGCCTACTATATTTCTGGTGAAAATCATTATCCT
    ATTCTTTCCAGTGGTCAGCTTGAGACTAGTTCTGTGAGTCTGAACAGTTTACCAGAAACT
    TATTTATCAGTTCTCTTTAATGATAGTGAACAAATCAAAGTTTTTGTCTCAGAACTTGCT
    CAAATTAGCCCAGAACTCAAGGCGGCTATCCAAAAGGTGGAATTAGCCCCAAGCAAGGTG
    ACATCCGATTTAATTCGATTGACCATGAATGATTCGGACGAAGTCTTGGTTCCTCTATCT
    GAAATGAGTAAGAAACTGCCATATTACAGTAAGATTAAGCCTCAATTGTCAGAACCGAGT
    GTGGTCGACATGGAAGCTGGAATCTACAGCTACACTGTGGCGGATAAATTAATTATGGAA
    GCTGAGGAAAAAGCCAAACAAGAGGCCAAGGAAGCTGAGAAAAAACAAGAAGAAGAACAG
    AAAAAACAAGAGGAAGAGAGCAATCGAAACCAAACGACCCAGCGTTCATCGCGTCGCTAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SP_0690 [new locus tag: SP_RS03380 ]
  • symbol: DivIB
  • description: cell division protein DivIB
  • length: 399
  • theoretical pI: 4.56912
  • theoretical MW: 45778.9
  • GRAVY: -0.958647

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Cations and iron carrying compounds ferrous iron transport protein B (TIGR00437; HMM-score: 6.4)
    and 1 more
    pullulanase, extracellular (TIGR02102; HMM-score: 3.7)
  • TheSEED  :
    • Cell division protein FtsQ
    Cell Division and Cell Cycle Cell Division and Cell Cycle - no subcategory Bacterial Cytoskeleton  Cell division protein FtsQ
  • PFAM:
    POTRA (CL0191) POTRA_1; POTRA domain, FtsQ-type (PF08478; HMM-score: 64.9)
    and 7 more
    no clan defined Saf4_Yju2; Saf4/Yju2 protein (PF04502; HMM-score: 13.5)
    Otopetrin; Otopetrin (PF03189; HMM-score: 11.3)
    Peptidase_AD (CL0130) Presenilin; Presenilin (PF01080; HMM-score: 10.2)
    no clan defined Na_trans_assoc; Sodium ion transport-associated (PF06512; HMM-score: 8.5)
    SAPS; SIT4 phosphatase-associated protein (PF04499; HMM-score: 7.2)
    TORC_M; Transducer of regulated CREB activity middle domain (PF12885; HMM-score: 6.5)
    DMT (CL0184) Zip; ZIP Zinc transporter (PF02535; HMM-score: 5.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cellwall
    • Cytoplasmic Score: 0.11
    • Cytoplasmic Membrane Score: 0.93
    • Cellwall Score: 8.19
    • Extracellular Score: 0.77
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 0.9961
    • Cell wall & surface Score: 0.0001
    • Extracellular Score: 0.0037
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.00708
    • TAT(Tat/SPI): 0.003615
    • LIPO(Sec/SPII): 0.002379
  • predicted transmembrane helices (TMHMM): 1

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MSKDKKNEDKETLEELKELSEWQKRNQEYLKKKAEEEAALAEEKEKERQARMGEESEKSEDKQDQESETDQEDSESAKEESEEKVASSEADKEKEEKEEPESKEKEEQDKKLAKKATKEKPAKAKIPGIHILRAFTILFPSLLLLFVSAYLLSPYATMKDIRVEGTVQTTADDIRQASGIQDSDYTINLLLDKAKYEKQIKSNYWVESAQLVYQFPTKFTIKVKEYDIVAYYISGENHYPILSSGQLETSSVSLNSLPETYLSVLFNDSEQIKVFVSELAQISPELKAAIQKVELAPSKVTSDLIRLTMNDSDEVLVPLSEMSKKLPYYSKIKPQLSEPSVVDMEAGIYSYTVADKLIMEAEEKAKQEAKEAEKKQEEEQKKQEEESNRNQTTQRSSRR

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site: 661701 [1]

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

  1. ↑ 1.0 1.1 1.2 Indu Warrier, Nikhil Ram-Mohan, Zeyu Zhu, Ariana Hazery, Haley Echlin, Jason Rosch, Michelle M Meyer, Tim van Opijnen
    The Transcriptional landscape of Streptococcus pneumoniae TIGR4 reveals a complex operon architecture and abundant riboregulation critical for growth and virulence.
    PLoS Pathog: 2018, 14(12);e1007461
    [PubMed:30517198] [WorldCat.org] [DOI] (I e)

⊟Relevant publications[edit | edit source]

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