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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 02-AUG-2013
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae gamPNI0373
- locus tag: HMPREF1038_01253 [new locus tag: HMPREF1038_RS06165 ]
- pan locus tag?: PNEUPAN002532000
- symbol: guaC
- pan gene symbol?: guaC
- synonym:
- product: guanosine 5'-monophosphate oxidoreductase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: HMPREF1038_01253 [new locus tag: HMPREF1038_RS06165 ]
- symbol: guaC
- product: guanosine 5'-monophosphate oxidoreductase
- replicon: chromosome
- strand: -
- coordinates: 1163494..1164480
- length: 987
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP001845 (1163494..1164480) NCBI
- BioCyc: see HMPREF1038_RS06165
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1107 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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961ATGTTAAATGAATTTCCAATTTTTGATTACGAAGATATTCAATTGATTCCAAATAAATGT
GTCATTAAAAGCCGTGCAGAAGCGGATACAAGTGTCACTTTAGGAAATCACACCTTTAAA
CTACCTGTTGTGCCAGCGAATATGCAGACGATTTTGGATGAAAATGTAGCAGAGCAACTG
GCTAAAGGTGGTTACTTCTACATTATGCACCGTTTTGATGAGGCAGGACGCATTCCTTTT
ATTAAACGAATGCACAATCAAGGGCTCATTGCTTCCATATCTGTCGGTGTTAAGGATTAT
GAGTATGATTTTGTTAGCCAGCTCAAGACTGATGCTCCTGAGTATATCACTATTGATATT
GCTCATGGTCATGCGGATAGCGTGATTTCTATGATTCAACACATCAAGAAAGAATTGCCA
GATACCTTTGTCATTGCTGGAAATGTGGGAACACCAGAAGCTGTGCGTGAATTGGAAAAT
GCTGGTGCGGATGCTACTAAGGTCGGAATCGGTCCTGGTAAGGTTTGTATCACCAAGGTT
AAGACTGGTTTTGGTACAGGTGGTTGGCAGTTGGCTGCTCTACGCTGGTGTGCCAAGGCT
GCGCGTAAACCGATTATCGCTGATGGAGGAATTCGTACTCACGGTGATATTGCTAAGTCT
ATCCGCTTCGGTGCTAGCATGATCATGATTGGTTCCCTCTTTGCAGGACACATTGAAAGT
CCAGGGAAAACGATTGAAGTCGATGGTGAACAGTTCAAAGAATATTATGGTTCAGCCTCA
CAATATCAAAAAGGTGCTTACAAAAATGTGGAAGGCAAACGTATCTTGCTTCCTGCTAAA
GGTCATCTGCAAGACACTTTAACTGAGATGGAACAAGACCTTCAAAGTGCTATTTCTTAT
GCAGGTGGACGTCAGGTTGCTGACCTTAAACACGTTGATTATGTGATCGTGAAAAACTCC
ATCTGGAATGGGGATGCTTCCCACTAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: HMPREF1038_01253 [new locus tag: HMPREF1038_RS06165 ]
- symbol: GuaC
- description: guanosine 5'-monophosphate oxidoreductase
- length: 328
- theoretical pI: 6.74299
- theoretical MW: 35911.8
- GRAVY: -0.185671
⊟Function[edit | edit source]
- reaction: EC 1.7.1.7? ExPASyGMP reductase Inosine 5'-phosphate + NH3 + NADP+ = guanosine 5'-phosphate + NADPH
- TIGRFAM: Purines, pyrimidines, nucleosides, and nucleotides Nucleotide and nucleoside interconversions guanosine monophosphate reductase (TIGR01306; EC 1.7.1.7; HMM-score: 645)and 12 morePurines, pyrimidines, nucleosides, and nucleotides Purine ribonucleotide biosynthesis inosine-5'-monophosphate dehydrogenase (TIGR01302; EC 1.1.1.205; HMM-score: 184.4)Purines, pyrimidines, nucleosides, and nucleotides Nucleotide and nucleoside interconversions guanosine monophosphate reductase (TIGR01305; EC 1.7.1.7; HMM-score: 178.5)Unknown function General IMP dehydrogenase family protein (TIGR01303; HMM-score: 145.3)Unknown function General IMP dehydrogenase family protein (TIGR01304; HMM-score: 57.2)Biosynthesis of cofactors, prosthetic groups, and carriers Other isopentenyl-diphosphate delta-isomerase, type 2 (TIGR02151; EC 5.3.3.2; HMM-score: 29.3)glycosyl amidation-associated protein WbuZ (TIGR03572; HMM-score: 22.4)Amino acid biosynthesis Histidine family 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase (TIGR00007; EC 5.3.1.16; HMM-score: 19.7)Amino acid biosynthesis Histidine family imidazoleglycerol phosphate synthase, cyclase subunit (TIGR00735; HMM-score: 17.6)Amino acid biosynthesis Glutamate family 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (TIGR01182; EC 4.1.2.14,4.1.3.16; HMM-score: 15.7)Energy metabolism Entner-Doudoroff 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase (TIGR01182; EC 4.1.2.14,4.1.3.16; HMM-score: 15.7)heme/flavin dehydrogenase, mycofactocin system (TIGR03966; EC 1.-.-.-; HMM-score: 14.9)geranylgeranylglyceryl phosphate synthase family protein (TIGR01768; EC 2.5.1.-; HMM-score: 13.8)
- TheSEED :
- GMP reductase (EC 1.7.1.7)
- PFAM: TIM_barrel (CL0036) IMPDH; IMP dehydrogenase / GMP reductase domain (PF00478; HMM-score: 228)and 10 moreFMN_dh; FMN-dependent dehydrogenase (PF01070; HMM-score: 29.6)NMO; Nitronate monooxygenase (PF03060; HMM-score: 26.8)His_biosynth; Histidine biosynthesis protein (PF00977; HMM-score: 25.8)TMP-TENI; Thiamine monophosphate synthase (PF02581; HMM-score: 23.2)DHO_dh; Dihydroorotate dehydrogenase (PF01180; HMM-score: 16.8)G3P_antiterm; Glycerol-3-phosphate responsive antiterminator (PF04309; HMM-score: 16.2)ThiG; Thiazole biosynthesis protein ThiG (PF05690; HMM-score: 15.6)Aldolase; KDPG and KHG aldolase (PF01081; HMM-score: 13.8)IGPS; Indole-3-glycerol phosphate synthase (PF00218; HMM-score: 12)Glu_synthase; Conserved region in glutamate synthase (PF01645; HMM-score: 12)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.009796
- TAT(Tat/SPI): 0.000302
- LIPO(Sec/SPII): 0.001104
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: AFS43291 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MLNEFPIFDYEDIQLIPNKCVIKSRAEADTSVTLGNHTFKLPVVPANMQTILDENVAEQLAKGGYFYIMHRFDEAGRIPFIKRMHNQGLIASISVGVKDYEYDFVSQLKTDAPEYITIDIAHGHADSVISMIQHIKKELPDTFVIAGNVGTPEAVRELENAGADATKVGIGPGKVCITKVKTGFGTGGWQLAALRWCAKAARKPIIADGGIRTHGDIAKSIRFGASMIMIGSLFAGHIESPGKTIEVDGEQFKEYYGSASQYQKGAYKNVEGKRILLPAKGHLQDTLTEMEQDLQSAISYAGGRQVADLKHVDYVIVKNSIWNGDASH
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1107 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
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