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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN000935000
- symbol?: ccs4
- synonym:
- description?: competence-induced protein Ccs4
- competence-induced protein Ccs4
- putative membrane protein
- damage-inducible protein CinA
- Competence-damage induced protein
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1099636..1101175
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
D39 MSVYGRVEEVHKENREPLEYQIEQESHHRESSRLPLVKILLWSTLVTGITLGVPLLLDLM
D39V MSVYGRVEEVHKENREPLEYQIEQESHHRESSRLPLVKILLWSTLVTGITLGVPLLLDLM
Hungary19A-6 MSVYGRVEEVHKENREPLEYQIEQESHHRESSRLPLVKILLWSTLVTGITLGVPLLLDLM
EF3030 MSVYGRVEEVHKENREPLEYQIEQESHHRESSRLPLVKILLWSTLVTGITLGVPLLLDLM
************************************************************
D39 SAQEVQDFYAGWALHQTGKIYSDYYGSQGLLYYLLTYVSQGGFFFAIFEWLALVAGGFFL
D39V SAQEVQDFYAGWALHQTGKIYSDYYGSQGLLYYLLTYVSQGGFFFAIFEWLALVAGGFFL
Hungary19A-6 SAQEVQDFYAGWALHQTGKIYSDYYGSQGLLYYLLTYVSQGGFFFAIFEWLALVAGGFFL
EF3030 SAQEVQDFYAGWALHQTGKIYSDYYGSQGLLYYLLTYVSQGGFFFAIFEWLALVAGGFFL
************************************************************
D39 FRSADTLTEQGDQAGHLVTIFYMLVTGLAFGGGYATLLALPFLFAAFSLVAAYLSNPSHD
D39V FRSADTLTEQGDQAGHLVTIFYMLVTGLAFGGGYATLLALPFLFAAFSLVAAYLSNPSHD
Hungary19A-6 FRSADTLTEQGDQAGHLVTIFYMLVTGLAFGGGYATLLALPFLFAAFSLVAAYLSNPSYD
EF3030 FRSADTLTEQGDQAGHLVTIFYMLVTGLAFGGGYATLLALPFLFAAFSLVAAYLSNPSHD
**********************************************************:*
D39 KGFVRIGLALAGGFFFAPLSSLLFIAVVSLGLLVFNLGHRRFVHGFYQFLAVALGFSLVF
D39V KGFVRIGLALAGGFFFAPLSSLLFIAVVSLGLLVFNLGHRRFVHGFYQFLAVALGFSLVF
Hungary19A-6 KGFVRIGLALAGGFFFAPLSSLLFIAVVSLGLLVFNLGHRRFAHGFYQFLAVALGFSLVF
EF3030 KGFVRIGLALAGGFFFAPLSSLLFIAVVSLGLLVFNLGHRRFAHGFYQFLAVALGFSLVF
******************************************.*****************
D39 YPTAYYSAATGSFGDAISGIRYPIDSIRFDFTSKILENMFFYGLLSLGLGFVVCIFLGLF
D39V YPTAYYSAATGSFGDAISGIRYPIDSIRFDFTSKILENMFFYGLLSLGLGFVVCIFLGLF
Hungary19A-6 YPTAYYSAATGSFGDAISGIRYPIDSIRFDFTSKILENMFFYGLLSLGLGFVVCIFLGLF
EF3030 YPTAYYSAATGSFGDAISGIRYPIDSIRFDFTSKILENMFFYGLLSLGLGFVVCIFLGLF
************************************************************
D39 QSKPFKLYVISVPASLVVILGLILLFFSQEPLHASYLMVVFPVFLLLLVTNIKSQQRGRS
D39V QSKPFKLYVISVPASLVVILGLILLFFSQEPLHASYLMVVFPVFLLLLVTNIKSQQRGRS
Hungary19A-6 QSKPFKLYVISVPASLVVILGLILLFFSQEPLHASYLMVVFPVFLLLLVTNIKSQQRGRS
EF3030 QSKPFKLYVISVPASLVVILGLILLFFSQEPLHASYLMVVFPVFLLLLVTNIKSQQRGRS
************************************************************
D39 ARRSRRETPVSLWSRFFKGNLYLLVFGFVYLLSVPFLMKFVLYPVPYQERNRLADLVKEE
D39V ARRSRRETPVSLWSRFFKGNLYLLVFGFVYLLSVPFLMKFVLYPVPYQERNRLADLVKEE
Hungary19A-6 ARRSRRETPVSLWSRFFKGNLYLLVFGFVYLLSVPFLMKFVLYPVPYQERNRLADLVKEE
EF3030 ARRSRRETPVSLWSRFFKGNLYLLVFGFVYLLSVPFLMKFVLYPVPYQERNRLADLVKEE
************************************************************
D39 TNTEDAIYAWDDTATLYRKSERLSPSAILSPLHYTATEENRNKLLNDLKEKQPKVIVVND
D39V TNTEDAIYAWDDTATLYRKSERLSPSAILSPLHYTATEENRNKLLNDLKEKQPKVIVVND
Hungary19A-6 TNTEDAIYAWDDTATLYRKSERLSPSAILSPLHYTATEENRNKLLNDLKEKQPKVIVVND
EF3030 TNTEDAIYAWDDTATLYRKSERLSPSAILSPLHYTATEENRNKLLNDLKEKQPKVIVVND
************************************************************
D39 KVVVWSEVETLLKENYQQVKTDYSEFKVYKIK
D39V KVVVWSEVETLLKENYQQVKTDYSEFKVYKIK
Hungary19A-6 KVEVWSEVETLLKENYQQVKTDYSEFKVYKIK
EF3030 KVVVWSEVETLLKENYQQVKTDYSEFKVYKIK
** *****************************