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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN001126000
- symbol?: cps2D
- synonyms: cps4D, cpsD
- description?: tyrosine protein kinase
- tyrosine protein kinase
- polysaccharide biosynthesis tyrosine autokinase CpsD
- Tyrosine-protein kinase CpsD
- polysaccharide biosynthesis tyrosine autokinase
- capsular polysaccharide biosynthesis protein Cps4D
- tyrosine-protein kinase wze
- tyrosine-protein kinase Wze (pseudogene)
- capsular polysaccharide biosynthesis protein Cps14D
- capsule biosynthesis tyrosine-protein kinase Wze
- capsular exopolysaccharide family
- protein-tyrosine kinase
- Tyrosine-protein kinase Cps2D
- tyrosine-protein kinase Cps2D cytosolic ATPase domain
- Tyrosine-protein kinase EpsD
- pseudogene
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 1333521..51927
- occurrence?: in 98% of 43 strains
⊟Orthologs[edit | edit source]
(14)
INV200:
SPNINV200_RS01670 (cps4D)
(14)
JJA:
SPJ_RS01710 (cps4D)
(19F)
MDRSPN001:
MDRSPN_RS01700 (cpsD)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MPTLEIAQKKLEFIKKAEEYYNALCTNIQLSGDKLKVISVTSVNPGEGKTTTSINIAWSF
D39 MPTLEISQAKLDFVKKAEEYYNSLCTNLQLSGDGLKVFSITSVKLGEGKSTTSTNIAWAF
D39V MPTLEISQAKLDFVKKAEEYYNSLCTNLQLSGDGLKVFSITSVKLGEGKSTTSTNIAWAF
Hungary19A-6 MPTLEISQAKLELVKKAEEYYNALCTNLQLSGDDLKVFSITSVKAGEGKTTTSTNIAWAF
EF3030 MPTLEIAQKKLEFIKKAEEYYNALCTNIQLSGDKLKVISVTSVNPGEGKTTTSVNIARSF
******:* **:::********:****:***** ***:*:***: ****:*** *** :*
TIGR4 ARAGYKTLLIDGDTRNSVMLGVFKSREKITGLTEFLSGTADLSHGLCDTNIENLFVVQSG
D39 ARAGYKTLLIDGDIRNSVMLGVFKARDKITGLTEFLSGTTDLSQGLCDTNIENLFVIQAG
D39V ARAGYKTLLIDGDIRNSVMLGVFKARDKITGLTEFLSGTTDLSQGLCDTNIENLFVIQAG
Hungary19A-6 ARAGYKTLLIDADMRNSVMSGVFKSRERITGLTEFLSGTTDLSQGLCDTNIENLFVIQAG
EF3030 ARAGYKTLLIDGDTRNSVMSGFFKSREKITGLTEFLSGTADLSHGLCDTNIENLFVVQSG
***********.* ***** *.**:*::***********:***:************:*:*
TIGR4 SVSPNPTALLQSKNFNDMIETLRKYFDYIIIDTPPIGIVIDAAIITQKCDASILVTATGE
D39 SVSPNPTALLQRKNFSTMLETLRKYFDYIIVDTAPVGVVIDAAIITRKCDASILVTEAGE
D39V SVSPNPTALLQRKNFSTMLETLRKYFDYIIVDTAPVGVVIDAAIITRKCDASILVTEAGE
Hungary19A-6 SVSPNPTALLQSKNFSTMLETLRKYFDYIVVDTAPVGVVIDAAIIMQKCDASILVTKAGE
EF3030 TVSPNPTALLQSKNFNDMIETLRKYFDYIIVDTTPIGIVIDAAIITQKCDASILVTATGE
:********** ***. *:**********::**.*:*:******* :********* :**
TIGR4 ANKRDIQKAKQQLKQTGKLFLGVVLNKLDISVNKYGVYGSYGNYGKK--
D39 INRRDIQKAKEQLEHTGKPFLGVVLNKFDTSVDKYGSYGDYGKNKK---
D39V INRRDIQKAKEQLEHTGKPFLGVVLNKFDTSVDKYGSYGDYGKNKK---
Hungary19A-6 TKRRDLQKAKEQLEQTGKSCLGVVLNKLDTSVEKYGSYGSYGNYRKQKK
EF3030 VNKRDVQKAKQQLEQTGKLFLGVVFNKLDISVDKYGVYGCYGNYGKK--
::**:****:**::*** ****:**:* **:*** ** **: *