PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001840000
• symbol^?: iscS_1
• synonym:
• description^?: cysteine desulfurase family protein

  descriptions from strain specific annotations:

  • cysteine desulfurase family protein
  • cysteine desulfurase
  • putative cysteine desulfhydrase
  • aminotransferase, class-V
  • aminotransferase V
  • Cysteine desulfurase IscS
  • class-V aminotransferase
  • cysteine desulphurase
  • beta-eliminating lyase family protein
  • Cysteine sulfinate desulfinase/cysteine desulfurase-like enzyme
  • Probable pyridoxal-phosphate dependent aminotransferase
  • Putative cysteine desulfurase
  • Putative cysteine desulfurase, associated with tRNA 4-thiouridine synthase
  • putative pyridoxal-phosphate dependent aminotransferase
• strand^?: +
• coordinates^?: 2303214..2304356
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS04340
(2)
D39:
SPD_RS04155
(2)
D39V:
SPV_RS04150
(19A)
Hungary19A-6:
SPH_RS04760
(19F)
EF3030:
EF3030_RS04185
(6B)^?
670-6B:
SP670_RS07145
(6A)
6A-10:
HKM25_RS04145
(5)
70585:
SP70585_RS04540
(19F)
A026:
T308_RS06325
(3)
A66:
A66_RS03980
(11A)
AP200:
SPAP_RS04255
(12F)
ASP0581:
EL334_RS04345
(19F)
ATCC 49619:
EL263_RS04350
(23F)
ATCC 700669:
SPN23F_RS04095
(19F)
BM6001:
ODS73_RS04570
(1)
BVJ1JL:
JN057_RS04235
(14)
CGSP14:
SPCG_RS04305
(19F)
G54:
SPG_RS04065
(1)
gamPNI0373:
HMPREF1038_RS04400
(3)
HU-OH:
EL271_RS04075
(19A)
Hu15:
SPNHU15_RS04340
(19A)
Hu17:
SPNHU17_RS04280
(1)
INV104:
INV104_RS04265
(14)
INV200:
SPNINV200_RS04190
(14)
JJA:
SPJ_RS04095
(19F)
MDRSPN001:
MDRSPN_RS05865
(1)
NCTC7465:
AT689_RS09415
(2)
NCTC7466:
DQM66_RS04155
(4)
NU83127:
EL277_RS04420
(3)
OXC141:
SPNOXC_RS04260
(1)
P1031:
SPP_RS04365
(2)
R6:
SPR_RS03935
(19A)
SP49:
BMJ42_RS04990
(1)
SPN032672:
SPN032672_RS10530
(3)
SPN034156:
SPN034156_RS10185
(3)
SPN034183:
SPN034183_RS04270
(3)
SPN994038:
SPN994038_RS04195
(3)
SPN994039:
SPN994039_RS04195
(3)
SPNA45:
SPNA45_RS06695
(19F)
ST556:
MYY_RS06760
(19F)
Taiwan19F-14:
SPT_RS06560
(19A)
TCH8431/19A:
HMPREF0837_RS07710
(4)
Xen35:
CXP32_RS04375

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MIYFDNSATTKPYPEALETYMQVASKILGNPSSLHRLGDQATRILDASRQQIADLIGKKS
  D39             MIYFDNSATTKPYPEALETYMQVASKILGNPSSLHRLGDQATRILDASRQQIADLIGKKS
  D39V            MIYFDNSATTKPYPEALETYMQVASKILGNPSSLHRLGDQATRILDASRQQIADLIGKKS
  Hungary19A-6    MIYFDNSATTKPYPEALETYVQVASKILGNPSSLHRLGDQATRILDASRQQIADLIGKKS
  EF3030          MIYFDNSATTKPYPEALETYMQVASKILGNPSSLHRLGDQATRILDASRQQIADLIGKKS
                  ********************:***************************************
  
  TIGR4           DEIFFTSGGTEGDNWLIKGVAFEKAQFGKHIIVSAIEHPAVKESALWLKSQGFEVDFAPV
  D39             DEIFFTSGGTEGDNWLIKGVAFEKAQFGKHIIVSAIEHPAVKESALWLKSQGFEVDFAPV
  D39V            DEIFFTSGGTEGDNWLIKGVAFEKAQFGKHIIVSAIEHPAVKESALWLKSQGFEVDFAPV
  Hungary19A-6    DEIFFTSGGTEGDNWVIKGVAFEKAQFGKHIIVSAIEHPAVKESALWLKSQGFEVDFSPV
  EF3030          DEIFFTSGGTEGDNWLIKGVAFEKAQFGKHIIVSAIEHPAVKESALWLKSQGFEVDFAPV
                  ***************:*****************************************:**
  
  TIGR4           DKKGLVDVEALAGLIRHDTILVSIMAVNNEIGSIQPIEAISEFLADKPTISFHVDAVQAL
  D39             DKKGLVDVEALAGLIRHDTILVSIMAVNNEIGSIQPIEAISEFLADKPTISFHVDAVQAL
  D39V            DKKGLVDVEALAGLIRHDTILVSIMAVNNEIGSIQPIEAISEFLADKPTISFHVDAVQAL
  Hungary19A-6    DKKGLVDVEALAGLIRPDTILVSIMAVNNEIGSIQPIEAISEFLADKPTISFHVDAVQAL
  EF3030          DKKGLVDVEALAGLIRHDTILVSIMAVNNEIGSIQPIEAISEFLADKPTISFHVDAVQAL
                  **************** *******************************************
  
  TIGR4           AKIPTEKYLTERVDCATFSSHKFHGVRGVGFVYIKSGKKITPLLTGGGQERDYRSTTENV
  D39             AKIPTEKYLTERVDCATFSSHKFHGVRGVGFVYIKSGKKITPLLTGGGQERDYRSTTENV
  D39V            AKIPTEKYLTERVDCATFSSHKFHGVRGVGFVYIKSGKKITPLLTGGGQERDYRSTTENV
  Hungary19A-6    AKIPTEKYLTERVDCATFSSHKFHGVRGVGFVYIKSGKKITPLLTGGGQERDYRSTTENV
  EF3030          AKIPTEKYLTERVDCATFSSHKFHGVRGVGFVYIKSGKKITPLLTGGGQERDYRSTTENV
                  ************************************************************
  
  TIGR4           AGIAATAKALRLSMEKLDIFRSKTGQMKAVIRQALLNYPDIFVFSDEENFAPHILTFGIK
  D39             AGIAATAKALRLSMEKLDIFRSKTGQMKAVIRQALLNYPDIFVFSDEENFAPHILTFGIK
  D39V            AGIAATAKALRLSMEKLDIFRSKTGQMKAVIRQALLNYPDIFVFSDEENFAPHILTFGIK
  Hungary19A-6    AGIAATAKALRLSMEKLDIFRSKTGQMKAVIHQALLNYPDIFVFSDEEDFAPHILTFGIK
  EF3030          AGIAATAKALRLSMEKLDIFRSKTGQMKAVIRQALLNYPDIFVFSDEEDFAPHILTFGIK
                  *******************************:****************:***********
  
  TIGR4           GVRGEVIVHAFEDYDIFISTTSACSSKAGKPAGTLIAMGVDKDKAKSAVRLSLDLENDMS
  D39             GVRGEVIVHAFEDYDIFISTTSACSSKAGKPAGTLIAMGVDKDKAKSAVRLSLDLENDMS
  D39V            GVRGEVIVHAFEDYDIFISTTSACSSKAGKPAGTLIAMGVDKDKAKSAVRLSLDLENDMS
  Hungary19A-6    GVRGEVIVHAFEDYDIFISTTSACSSKAGKPAGTLIAMGVDKDKAKSAVRLSLDLENDMS
  EF3030          GVRGEVIVHAFEDYDIFISTTSACSSKAGKPAGTLIAMGVDKDKAKSAVRLSLDLENDMS
                  ************************************************************
  
  TIGR4           QVEQFLTKLKLIYNQTRKVR
  D39             QVEQFLTKLKLIYNQTRKVR
  D39V            QVEQFLTKLKLIYNQTRKVR
  Hungary19A-6    QVEQFLTKLKLIYNQTRKVR
  EF3030          QVEQFLTKLKLIYNQTRKVR
                  ********************