PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN001964000
• symbol^?: pavA
• synonym:
• description^?: Rqc2 family fibronectin-binding protein PavA

  descriptions from strain specific annotations:

  • Rqc2 family fibronectin-binding protein PavA
  • fibronectin/fibrinogen binding protein
  • fibronectin/fibrinogen-binding protein adherence and virulence protein A
  • adherence and virulence protein A
  • dihydroorotate dehydrogenase
  • Fibronectin-binding protein-like protein A
  • fibronectin-binding protein PavA
  • fibronectin-binding protein A domain protein
  • predicted RNA-binding protein
  • Rqc2 RqcH
  • pseudogene
• strand^?: -
• coordinates^?: 2431580..2433236
• occurrence^?: in 100% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
SP_RS04790 (pavA)
(2)
D39:
SPD_RS04595 (pavA)
(2)
D39V:
SPV_RS04585 (pavA)
(19A)
Hungary19A-6:
SPH_RS05165 (pavA)
(19F)
EF3030:
EF3030_RS04650 (pavA)
(6B)^?
670-6B:
SP670_RS06705 (pavA)
(6A)
6A-10:
HKM25_RS04575 (pavA)
(5)
70585:
SP70585_RS05000 (pavA)
(19F)
A026:
T308_RS05875 (pavA)
(3)
A66:
A66_RS04395 (pavA)
(11A)
AP200:
SPAP_RS04960 (pavA)
(12F)
ASP0581:
EL334_RS04825 (pavA)
(19F)
ATCC 49619:
EL263_RS04785 (pavA)
(23F)
ATCC 700669:
SPN23F_RS04540 (pavA)
(19F)
BM6001:
ODS73_RS04965 (pavA)
(1)
BVJ1JL:
JN057_RS04630 (pavA)
(14)
CGSP14:
SPCG_RS04900 (pavA)
(19F)
G54:
SPG_RS04485 (pavA)
(1)
gamPNI0373:
HMPREF1038_RS04855 (pavA)
(3)
HU-OH:
EL271_RS04515 (pavA)
(19A)
Hu15:
SPNHU15_RS04715 (pavA)
(19A)
Hu17:
SPNHU17_RS04645 (pavA)
(1)
INV104:
INV104_RS04850 (pavA)
(14)
INV200:
SPNINV200_RS04750 (pavA)
(14)
JJA:
SPJ_RS04540 (pavA)
(19F)
MDRSPN001:
MDRSPN_RS05425 (pavA)
(1)
NCTC7465:
AT689_RS08990 (pavA)
(2)
NCTC7466:
DQM66_RS04595 (pavA)
(4)
NU83127:
EL277_RS04865 (pavA)
(3)
OXC141:
SPNOXC_RS04710 (pavA)
(1)
P1031:
SPP_RS04800 (pavA)
(2)
R6:
SPR_RS04355 (pavA)
(19A)
SP49:
BMJ42_RS05365 (pavA)
(1)
SPN032672:
SPN032672_RS11110 (pavA)
(3)
SPN034156:
SPN034156_RS10605 (pavA)
(3)
SPN034183:
SPN034183_RS04725 (pavA)
(3)
SPN994038:
SPN994038_RS04635 (pavA)
(3)
SPN994039:
SPN994039_RS04640 (pavA)
(3)
SPNA45:
SPNA45_RS07145 (pavA)
(19F)
ST556:
MYY_RS06345 (pavA)
(19F)
Taiwan19F-14:
SPT_RS06135 (pavA)
(19A)
TCH8431/19A:
HMPREF0837_RS07290 (pavA)
(4)
Xen35:
CXP32_RS04825 (pavA)

⊟Genome Viewer

TIGR4
D39
D39V
Hungary19A-6
EF3030

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  TIGR4           MSFDGFFLHHIVEELRSELVNGRIQKINQPFEQELVLQIRSNRQSHRLLLSAHPVFGRIQ
  D39             MSFDGFFLHHIVEELRSELVNGRIQKINQPFEQELVLQIRSNRQSHRLLLSAHPVFGRIQ
  D39V            MSFDGFFLHHIVEELRSELVNGRIQKINQPFEQELVLQIRSNRQSHRLLLSAHPVFGRIQ
  EF3030          MSFDGFFLHHIVEELRSELVNGRIQKINQPFEQELVLQIRSNRQSHRLLLSAHPVFGRIQ
                  ************************************************************
  
  TIGR4           LTQTTFENPAQPSTFIMVLRKYLQGALIESIEQVENDRIVEITVSNKNEIGDHIQATLII
  D39             LTQTTFENPAQPSTFIMVLRKYLQGALIESIEQVENDRIVEMTVSNKNEIGDHIQATLII
  D39V            LTQTTFENPAQPSTFIMVLRKYLQGALIESIEQVENDRIVEMTVSNKNEIGDHIQATLII
  EF3030          LTQTTFENPAQPSTFIMVLRKYLQGALIESIEQVENDRIVEITVSNKNEIGDHIQATLII
                  *****************************************:******************
  
  TIGR4           EIMGKHSNILLVDKSSHKILEVIKHVGFSQNSYRTLLPGSTYIAPPSTKSLNPFTIKDEK
  D39             EIMGKHSNILLVDKSSHKILEVIKHVGFSQNSYRTLLPGSTYIAPPSTESLNPFTIKDEK
  D39V            EIMGKHSNILLVDKSSHKILEVIKHVGFSQNSYRTLLPGSTYIAPPSTESLNPFTIKDEK
  EF3030          EIMGKHSNILLVDKSSHKILEVIKHVGFSQNSYRTLLPGSTYIAPPSTKSLNPFTIKDEK
                  ************************************************:***********
  
  TIGR4           LFEILQTQELTAKNLQSLFQGLGRDTANELERILVSEKLSAFRNFFNQETKPCLTETSFS
  D39             LFEILQTQELTAKNLQSLFQGLGRDTANELERILVSEKLSAFRNFFNQETKPCLTETSFS
  D39V            LFEILQTQELTAKNLQSLFQGLGRDTANELERILVSEKLSAFRNFFNQETKPCLTETSFS
  EF3030          LFEILQTQELTAKNLQSLFQGLGRDTANELERILVSEKLSAFRNFFNQETKPCLTETSFS
                  ************************************************************
  
  TIGR4           PVPFANQVGEPFANLSDLLDTYYKDKAERDRVKQQASELIRRVENELQKNRHKLKKQEKE
  D39             PVPFANQAGEPFANLSDLLDTYYKNKAERDRVKQQASELIRRVENELQKNRHKLKKQEKE
  D39V            PVPFANQAGEPFANLSDLLDTYYKNKAERDRVKQQASELIRRVENELQKNRHKLKKQEKE
  EF3030          PVPFANQVGEPFANLSDLLDTYYKDKAERDRVKQQASELIRRVENELQKNRHKLKKQEKE
                  *******.****************:***********************************
  
  TIGR4           LLATDNAEEFRQKGELLTTFLHQVPNDQDQVILDNYYTNQPIMIALDKALTPNQNAQRYF
  D39             LLATDNAEEFRQKGELLTTFLHQVPNDQDQVILDNYYTNQPIMIALDKALTPNQNAQRYF
  D39V            LLATDNAEEFRQKGELLTTFLHQVPNDQDQVILDNYYTNQPIMIALDKALTPNQNAQRYF
  EF3030          LLATDNAEEFRQKGELLTTFLHQVPNDQDQVILDNYYTNQPIMIALDKALTPNQNAQRYF
                  ************************************************************
  
  TIGR4           KRYQKLKEAVKYLTDLIEETKATILYLESVETVLNQAGLEEIAEIREELIQTGFIRRRQR
  D39             KRYQKLKEAVKYLTDLIEETKATILYLESVETVLNQAGLEEIAEIREELIQTGFIRRRQR
  D39V            KRYQKLKEAVKYLTDLIEETKATILYLESVETVLNQAGLEEIAEIREELIQTGFIRRRQR
  EF3030          KRYQKLKEAVKYLTDLIEETKATILYLESVETVLNQAGLEEIAEIREELIQTGFIRRRQR
                  ************************************************************
  
  TIGR4           EKIQKRKKLEQYLASDGKTIIYVGRNNLQNEELTFKMARKEELWFHAKDIPGSHVVISGN
  D39             EKIQKRKKLEQYLASDGKTIIYVGRNNLQNEELTFKMARKEELWFHAKDIPGSHVVISGN
  D39V            EKIQKRKKLEQYLASDGKTIIYVGRNNLQNEELTFKMARKEELWFHAKDIPGSHVVISGN
  EF3030          EKIQKRKKLEQYLASDGKTIIYVGRNNLQNEELTFKMARKEELWFHAKDIPGSHVVISGN
                  ************************************************************
  
  TIGR4           LDPSDAVKTDAAELAAYFSQGRLSNLVQVDMIEVKKLNKPTGGKPGFVTYTGQKTLRVTP
  D39             LDPSDAVKTDAAELAAYFSQGRLSNLVQVDMIEVKKLNKPTGGKPGFVTYTGQKTLRVTP
  D39V            LDPSDAVKTDAAELAAYFSQGRLSNLVQVDMIEVKKLNKPTGGKPGFVTYTGQKTLRVTP
  EF3030          LDPSDAVKTDAAELAAYFSQGRLSNLVQVDMIEVKKLNKPTGGKPGFVTYTGQKTLRVTP
                  ************************************************************
  
  TIGR4           DSKKIASMKKS
  D39             DSKKIASMKKS
  D39V            DSKKIASMKKS
  EF3030          DSKKIASMKKS
                  ***********