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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002654000
- symbol?: msbA_2
- synonym:
- description?: ATP-binding cassette domain-containing protein
- ATP-binding cassette domain-containing protein
- putative ABC transporter ATP-binding protein
- multidrug resistance protein 1 (ATP-binding cassettesub-family B member 1) (P-glycoprotein 1) (antigen)
- ABC transporter ATP-binding protein
- ABC transporter, ATP-binding protein
- Alpha-hemolysin translocation ATP-binding protein
- alpha-hemolysin translocation ATP-binding protein HlyB
- ABC transporter ATP-bindng protein - possibly multidrug efflux, truncation
- ABC-type bacteriocin/lantibiotic exporter
- Lipid A export ATP-binding/permease protein
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3293875..3294210
- occurrence?: in 73% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
D39 MTIEPGQRIALVGQSGSGKSTLSKIPSGLYKIDTGKVLFDGVNINQIDKKILSQNLGVVP
D39V MTIEPGQRIALVGQSGSGKSTLSKIPSGLYKIDTGKVLFDGVNINQIDKKILSQNLGVVP
Hungary19A-6 ------------------------------------------------------------
D39 QDSFLLNRSILDNITLKHEVTSQKIEEVCKAVQIYDEIMAMPMKFNTIISEMGSNISGGQ
D39V QDSFLLNRSILDNITLKHEVTSQKIEEVCKAVQIYDEIMAMPMKFNTIISEMGSNISGGQ
Hungary19A-6 --------------------------------------MAMPMKFNTIISEMGSNISGGQ
**********************
D39 RQRIALARALINNPSIVILDEATSALDTINEERITKYIKSQGCTQIIVAHRLSTIKDADI
D39V RQRIALARALINNPSIVILDEATSALDTINEERITKYIKSQGCTQIIVAHRLSTIKDADI
Hungary19A-6 RQRIALARALINNPSIVILDEATSALDTINEERITKYIQSQGCTQIIIAHRLSTIKDADI
**************************************:********:************
D39 IVVMKGGKIVESGNHKYLMDLGGEYYSLYTKRK
D39V IVVMKGGKIVESGNHKYLMDLGGEYYSLYTKRK
Hungary19A-6 IVVMKGGKIVESGNHKYLMTLGGEYYSLYTKRK
******************* *************