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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN002720000
- symbol?: glnH_3
- synonym:
- description?: ABC transporter substrate-binding protein
- ABC transporter substrate-binding protein
- amino acid ABC transporter, amino acid-binding protein
- putative extracellular amino acid-binding protein
- amino acid ABC transporter substrate-binding protein
- ABC transporter substrate-binding protein - glutamine-binding protein
- Glutamine-binding periplasmic protein
- ABC transporter substrate-binding lipoprotein
- transporter substrate-binding domain-containing protein
- ABC transporter, amino acid-binding protein
- ABC transporter, substrate-binding protein, family 3
- ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein
- Amino acid ABC transporter, amino acid-binding/permease protein
- Amino acid ABC transporter amino acid-binding/permease protein
- amino acid ABC transporter amino acid-binding protein
- bacterial extracellular solute-binding, 3 family protein
- Putative ABC transporter arginine-binding protein
- putative extracellular amino acid-binding protein (pseudogene)
- pseudogene
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 3502735..3503562
- occurrence?: in 100% of 41 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD
D39 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD
D39V MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVEAIKQKGKLVVATSPDYAPFEFQSLVD
Hungary19A-6 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD
EF3030 MKSKKWIFVLCNFLASFFLVACQSGSNGSQSAVDAIKQKGKLVVATSPDYAPFEFQSLVD
*********************************:**************************
TIGR4 GKNQVVGADIDMAQAIADELGVKLEISSMSFDNVLTSLQTGKADLAVAGISATDERKEVF
D39 GKNQVVGADIDMAQAIADELGVKLEISSMSFDNVLTSLQTGKADLAVAGISATDERKEVF
D39V GKNQVVGADIDMAQAIADELGVKLEISSMSFDNVLTSLQTGKADLAVAGISATDERKEVF
Hungary19A-6 GKNQVVGADIDMAQAIADELGVKLEISSMSFDNVLTSLQTGKADLAVAGISATDERKEVF
EF3030 GKNQVVGADIDMAQAIADELGVKLEISSMSFDNVLTSLQTGKADLAVAGISATDERKEVF
************************************************************
TIGR4 DFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKVQLTSLTN
D39 DFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQLTSLTN
D39V DFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQLTSLTN
Hungary19A-6 DFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKAQLTSLTN
EF3030 DFSIPYYENKISFLVRKADVEKYKDLTSLESANIAAQKGTVPESMVKEQLPKVQLTSLTN
****************************************************.*******
TIGR4 MGEAVNELQAGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRKNSDDLK
D39 MGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRKNSDDLK
D39V MGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRKNSDDLK
Hungary19A-6 MGEAVNELQAGKVDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRKNSDDLK
EF3030 MGEAVNELQTGKIDAVHMDEPVALSYAAKNAGLAVATVSLKMKDGDANAVALRKNSDDLK
*********:**:***********************************************
TIGR4 EVVDKVVQKLKDEGTYQSYLEKAASLTEVEE
D39 EVVDKVIQKLKNEGTYQSYLEKAASLTEVEE
D39V EVVDKVIQKLKNEGTYQSYLEKAASLTEVEE
Hungary19A-6 EVVDKVIQKLKDEGIYQSYLEKAASLTEVEE
EF3030 EVVNKVIQKLKDEGTSQSYLEKAASLTEVEE
***:**:****:** ***************