PangenomeTIGR4

serotype 4

D39

serotype 2

D39V

serotype 2

Hungary19A-6

serotype 19A

EF3030

serotype 19F

670-6B

serotype 6B

6A-10

serotype 6A

70585

serotype 5

A026

serotype 19F

A66

serotype 3

AP200

serotype 11A

ASP0581

serotype 12F

ATCC 49619

serotype 19F

ATCC 700669

serotype 23F

BM6001

serotype 19F

BVJ1JL

serotype 1

CGSP14

serotype 14

G54

serotype 19F

HU-OH

serotype 3

Hu15

serotype 19A

Hu17

serotype 19A

INV104

serotype 1

INV200

serotype 14

JJA

serotype 14

MDRSPN001

serotype 19F

NCTC7465

serotype 1

NCTC7466

serotype 2

NU83127

serotype 4

OXC141

serotype 3

P1031

serotype 1

R6

serotype 2

SP49

serotype 19A

SPN032672

serotype 1

SPN034156

serotype 3

SPN034183

serotype 3

SPN994038

serotype 3

SPN994039

serotype 3

SPNA45

serotype 3

ST556

serotype 19F

TCH8431/19A

serotype 19A

Taiwan19F-14

serotype 19F

Xen35

serotype 4

gamPNI0373

serotype 1

⊟Summary

• pan ID^?: PNEUPAN002831000
• symbol^?: pclA
• synonym:
• description^?: pneumococcal collagen-like adhesin PclA

  descriptions from strain specific annotations:

  • pneumococcal collagen-like adhesin PclA
  • G5 domain family
  • G5 domain-containing protein
  • G5 domain family protein
  • putative collagen-like surface-anchored protein
  • Gram-positive signal peptide protein, YSIRK family
  • Levansucrase
  • LPXTG cell wall anchor domain protein
  • peptidase
  • Pneumococcal collagen-like protein PclA
  • signal peptide protein, YSIRK family
• strand^?: -
• coordinates^?: 3718914..3725027
• occurrence^?: in 44% of 43 strains

⊟Orthologs

(4)^?
TIGR4:
—
(2)
D39:
SPD_RS07315
(2)
D39V:
SPV_RS07310
(19A)
Hungary19A-6:
—
(19F)
EF3030:
—
(6B)^?
670-6B:
—
(6A)
6A-10:
HKM25_RS07185
(5)
70585:
SP70585_RS07855
(19F)
A026:
T308_RS07160
(3)
A66:
—
(11A)
AP200:
—
(12F)
ASP0581:
EL334_RS07890
(19F)
ATCC 49619:
EL263_RS07465
(23F)
ATCC 700669:
SPN23F_RS07630
(19F)
BM6001:
ODS73_RS07870
(1)
BVJ1JL:
—
(14)
CGSP14:
—
(19F)
G54:
—
(1)
gamPNI0373:
—
(3)
HU-OH:
—
(19A)
Hu15:
—
(19A)
Hu17:
—
(1)
INV104:
INV104_RS07580
(14)
INV200:
—
(14)
JJA:
SPJ_RS07195
(19F)
MDRSPN001:
MDRSPN_RS06680
(1)
NCTC7465:
—
(2)
NCTC7466:
DQM66_RS07310
(4)
NU83127:
—
(3)
OXC141:
—
(1)
P1031:
—
(2)
R6:
SPR_RS06970
(19A)
SP49:
BMJ42_RS07930
(1)
SPN032672:
SPN032672_RS02460
(3)
SPN034156:
—
(3)
SPN034183:
—
(3)
SPN994038:
—
(3)
SPN994039:
—
(3)
SPNA45:
—
(19F)
ST556:
MYY_RS07595
(19F)
Taiwan19F-14:
SPT_RS07385
(19A)
TCH8431/19A:
HMPREF0837_RS08530
(4)
Xen35:
—

⊟Genome Viewer

D39
D39V

⊟Alignments

• alignment of orthologues:
  CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
  
  
  D39             MKHSHKKSFDWYSMQQRYSIRKYYFGAASVLLGTALVLGAAASVQTVQAEENKQETTNSI
  D39V            MKHSHKKSFDWYSMQQRYSIRKYYFGAASVLLGTALVLGAAASVQTVQAEENKQETTNSI
                  ************************************************************
  
  D39             SVGRGEAATKPAEVSASNKEKTYAAPTVANPVETTPVKTEEVTKPAEKVEEAKDKKEEVT
  D39V            SVGRGEAATKPAEVSASNKEKTYAAPTVANPVETTPVKTEEVTKPAEKVEEAKDKKEEVT
                  ************************************************************
  
  D39             HQDAVDKSKLLTALSRAKKLESKLYTEASAANLQTSIQAGQSLLGKADATEAELSAAESS
  D39V            HQDAVDKSKLLTALSRAKKLESKLYTEASAANLQTSIQAGQSLLGKADATEAELSAAESS
                  ************************************************************
  
  D39             IQSFIIGLELRSNSNKETVSETPVAKKADAVESKEGAKPAATTERSAVDSAILPTSTADK
  D39V            IQSFIIGLELRSNSNKETVSETPVAKKADAVESKEGAKPAATTERSAVDSAILPTSTADK
                  ************************************************************
  
  D39             VETTSAPASINEILKLGLSLSDARQNPAIRKEDVNRGYSGFRAASNPANPIVSGSGNTVA
  D39V            VETTSAPASINEILKLGLSLSDARQNPAIRKEDVNRGYSGFRAASNPANPIVSGSGNTVA
                  ************************************************************
  
  D39             FADISQGGRSYSFRGYGNSRGGNSIHYDVTTVRSGNSVNFTISYSAPGDSREFVNNNFIL
  D39V            FADISQGGRSYSFRGYGNSRGGNSIHYDVTTVRSGNSVNFTISYSAPGDSREFVNNNFIL
                  ************************************************************
  
  D39             DKGDGFGNPSNATITSSNPRVREQSKSISQGANYVSHSGYSMTSAISTNTEQTIRFSLPI
  D39V            DKGDGFGNPSNATITSSNPRVREQSKSISQGANYVSHSGYSMTSAISTNTEQTIRFSLPI
                  ************************************************************
  
  D39             INLNGDLSVRLKPVTFNVDQGGGGAATSNDPYSNSNYYYRANPLYLDANPYGGTNNKTVS
  D39V            INLNGDLSVRLKPVTFNVDQGGGGAATSNDPYSNSNYYYRANPLYLDANPYGGTNNKTVS
                  ************************************************************
  
  D39             EDIDFQTVYLPTSKLPEGQTRLVREGEKGQRQITYKVHRFGNETLLGLPISNSVTKEAKP
  D39V            EDIDFQTVYLPTSKLPEGQTRLVREGEKGQRQITYKVHRFGNETLLGLPISNSVTKEAKP
                  ************************************************************
  
  D39             RIMQIGVAKDLIDTVKPRVDQNKVGDTNNLTFYLDNDGNGVYTEGVDELVQKIAIKDGAK
  D39V            RIMQIGVAKDLIDTVKPRVDQNKVGDTNNLTFYLDNDGNGVYTEGVDELVQKIAIKDGAK
                  ************************************************************
  
  D39             GEKGDQGERGLTGAKGEKGDRGERGLTGAQGAKGEKGDRGERGLTGAQGAKGEKGDRGER
  D39V            GEKGDQGERGLTGAKGEKGDRGERGLTGAQGAKGEKGDRGERGLTGAQGAKGEKGDRGER
                  ************************************************************
  
  D39             GLTGAQGAKGEKGDRGERGLTGAQGAKGEKGAQGERGLTGAQGAKGEKGDQGERGLTGAQ
  D39V            GLTGAQGAKGEKGDRGERGLTGAQGAKGEKGAQGERGLTGAQGAKGEKGDQGERGLTGAQ
                  ************************************************************
  
  D39             GAKGEKGDQGERGLTGAQGAKGEKGAQGERGLTGTQGAKGEKGDRGERGLTGAQGAKGEK
  D39V            GAKGEKGDQGERGLTGAQGAKGEKGAQGERGLTGTQGAKGEKGDRGERGLTGAQGAKGEK
                  ************************************************************
  
  D39             GDRGERGLTGAQGAKGEKGAQGERGLTGAQGAKGEKGDQGERGLTGAQGEKGDRGERGLT
  D39V            GDRGERGLTGAQGAKGEKGAQGERGLTGAQGAKGEKGDQGERGLTGAQGEKGDRGERGLT
                  ************************************************************
  
  D39             GAKGEKGDQGERGITGAKGEKGAQGERGLTGAQGAKGEKGDQGERGLTGAQGEKGAQGQA
  D39V            GAKGEKGDQGERGITGAKGEKGAQGERGLTGAQGAKGEKGDQGERGLTGAQGEKGAQGQA
                  ************************************************************
  
  D39             GRDGVTPTVTVKDNKNDGTHTITINDGRGNVTSTVVRDGFDGASPLVATQRNDADKTTTV
  D39V            GRDGVTPTVTVKDNKNDGTHTITINDGRGNVTSTVVRDGFDGASPLVATQRNDADKTTTV
                  ************************************************************
  
  D39             IFYYDKNGNNELDASDKKLKEVVIADGAKGEKGDKGEQGLQGRDGEQGPKGEDGKTPTVK
  D39V            IFYYDKNGNNELDASDKKLKEVVIADGAKGEKGDKGEQGLQGRDGEQGPKGEDGKTPTVK
                  ************************************************************
  
  D39             VTDGQDGTHTITINDGKGGITTTVVRDGFDGASPLVSTHRNEADKTTTVIFYYDLNDNNQ
  D39V            VTDGQDGTHTITINDGKGGITTTVVRDGFDGASPLVSTHRNEADKTTTVIFYYDLNDNNQ
                  ************************************************************
  
  D39             FDEGDTKLKEVVIADGKQGPKGDKGDNGKDGFTPEVTVTDNNNGTHTITITQPDNRPSLT
  D39V            FDEGDTKLKEVVIADGKQGPKGDKGDNGKDGFTPEVTVTDNNNGTHTITITQPDNRPSLT
                  ************************************************************
  
  D39             TIVKNGEDGKTPKVKAERDDAKKQTTLTFYIDKDGDGSYTAGKDELVQTTVVKDGQDGAA
  D39V            TIVKNGEDGKTPKVKAERDDAKKQTTLTFYIDKDGDGSYTAGKDELVQTTVVKDGQDGAA
                  ************************************************************
  
  D39             GASGRDGKEVLNGKVDPTTEGKDGDTFVNTQTGDVFVKKGNTWEPAGNIKGPKGDKGADG
  D39V            GASGRDGKEVLNGKVDPTTEGKDGDTFVNTQTGDVFVKKGNTWEPAGNIKGPKGDKGADG
                  ************************************************************
  
  D39             AKGEKGAQGERGLTGAQGVKGEKGDQGERGLTGSKGEKGDQGERGLTGAQGAKGDKGEQG
  D39V            AKGEKGAQGERGLTGAQGVKGEKGDQGERGLTGSKGEKGDQGERGLTGAQGAKGDKGEQG
                  ************************************************************
  
  D39             LQGRDGAQGPKGADGQRGPAGPQGPKGEQGNPGTPGKDGKSLIAVKNGVLVTITPVEGRP
  D39V            LQGRDGAQGPKGADGQRGPAGPQGPKGEQGNPGTPGKDGKSLIAVKNGVLVTITPVEGRP
                  ************************************************************
  
  D39             QTTFVEDGQKGADGKTPTVTITEGQNGTHTLTVHNPGSPDVTTTIRDGATGQAGRDGKDV
  D39V            QTTFVEDGQKGADGKTPTVTITEGQNGTHTLTVHNPGSPDVTTTIRDGATGQAGRDGKDV
                  ************************************************************
  
  D39             LNGKVNPQPNQGKNGDKYINIETGDVYVKNNGNWDKEGNIKGPKGDKGADGAKGEKGDQG
  D39V            LNGKVNPQPNQGKNGDKYINIETGDVYVKNNGNWDKEGNIKGPKGDKGADGAKGEKGDQG
                  ************************************************************
  
  D39             ERGLTGAQGAKGADGAVGRDGRDGKDVLNGKANPEAHQGKDGDKYVNTETGDVFVKNNGN
  D39V            ERGLTGAQGAKGADGAVGRDGRDGKDVLNGKANPEAHQGKDGDKYVNTETGDVFVKNNGN
                  ************************************************************
  
  D39             WDKEGNIKGPKGDKGADGAKGEKGDRGERGLTGAQGAKGADGAAGRDGRDGRDGKDVLNG
  D39V            WDKEGNIKGPKGDKGADGAKGEKGDRGERGLTGAQGAKGADGAAGRDGRDGRDGKDVLNG
                  ************************************************************
  
  D39             KVNPEANQGKDGDKYVNTETGDVFVKNNGNWDKEGNIKGSKGDKGERGEDGKTPEVTVTP
  D39V            KVNPEANQGKDGDKYVNTETGDVFVKNNGNWDKEGNIKGSKGDKGERGEDGKTPEVTVTP
                  ************************************************************
  
  D39             GKDGHSTDITFTVPGKDPVTVNVKDGENGLNGKTPKVDLLRVQGKNGNPSHTIVTFYTDE
  D39V            GKDGHSTDITFTVPGKDPVTVNVKDGENGLNGKTPKVDLLRVQGKNGNPSHTIVTFYTDE
                  ************************************************************
  
  D39             NNDGKYTPGTDELLGSEMIKDGAKGADGRDGKSLLTVKDGKETKVYQEDPANPGQPLNPE
  D39V            NNDGKYTPGTDELLGSEMIKDGAKGADGRDGKSLLTVKDGKETKVYQEDPANPGQPLNPE
                  ************************************************************
  
  D39             KPLAVIRDGVDGKSPTVTAVRKDEAGHKGVEITVDNHDGSQPTTVFVQDGAKGKTGATGQ
  D39V            KPLAVIRDGVDGKSPTVTAVRKDEAGHKGVEITVDNHDGSQPTTVFVQDGAKGKTGATGQ
                  ************************************************************
  
  D39             DGQTPTITTQRGQDGQSTVVTITTSGKDPVTFTVKDGKNGKDGRAPKIKVEDITSPSRIR
  D39V            DGQTPTITTQRGQDGQSTVVTITTSGKDPVTFTVKDGKNGKDGRAPKIKVEDITSPSRIR
                  ************************************************************
  
  D39             RDTDAAATPTRNGIRVTVYDDVNDNGVYDEGVDKVLNSKDIYNGIDGRDGSAPTITTKDN
  D39V            RDTDAAATPTRNGIRVTVYDDVNDNGVYDEGVDKVLNSKDIYNGIDGRDGSAPTITTKDN
                  ************************************************************
  
  D39             GDGTHTITVQNPDGSESTTVVKDGKDGKTANITTTENPDGSHTITVTNPDGSTKETVVKN
  D39V            GDGTHTITVQNPDGSESTTVVKDGKDGKTANITTTENPDGSHTITVTNPDGSTKETVVKN
                  ************************************************************
  
  D39             GKDGKTPKVEVTDNNDGTHTVKVTDGDGNVTNAIIKDGKDGKAATATTTENPDGSHTVTI
  D39V            GKDGKTPKVEVTDNNDGTHTVKVTDGDGNVTNAIIKDGKDGKAATATTTENPDGSHTVTI
                  ************************************************************
  
  D39             TNPDGTKNEFVVKNGRDGVDGRTPTASVRDNGDGSHTIVITNPEGVTTETTVRDGKSPKV
  D39V            TNPDGTKNEFVVKNGRDGVDGRTPTASVRDNGDGSHTIVITNPEGVTTETTVRDGKSPKV
                  ************************************************************
  
  D39             TITDEQNGTHKISVLNGDGTTTETIIKDGKSPVATVRDNQDGTYTIRVENGNGTVSETTV
  D39V            TITDEQNGTHKISVLNGDGTTTETIIKDGKSPVATVRDNQDGTYTIRVENGNGTVSETTV
                  ************************************************************
  
  D39             RDGKSPTAKVVDNGDGTHTITVVNSDGITTTTTVRDGREPKLEVIDNNDGSHTIKVTGAD
  D39V            RDGKSPTAKVVDNGDGTHTITVVNSDGITTTTTVRDGREPKLEVIDNNDGSHTIKVTGAD
                  ************************************************************
  
  D39             GKGTTTTIFDGKSPKANIVDNGDGTHTLTIVDSDGREYKSIIKDGKDGKDSVSPTVTVKN
  D39V            GKGTTTTIFDGKSPKANIVDNGDGTHTLTIVDSDGREYKSIIKDGKDGKDSVSPTVTVKN
                  ************************************************************
  
  D39             NNDGTHVVTITNPDGSKTEMVIKDGKDGKSPKVSVEDNGDGSHTITIINSDGTVTKTVIK
  D39V            NNDGTHVVTITNPDGSKTEMVIKDGKDGKSPKVSVEDNGDGSHTITIINSDGTVTKTVIK
                  ************************************************************
  
  D39             DGKDGRDGRDGRDGKDGKDGKCGCQDKPVTPSNDKPVPPTPNVPTPEVPVKPVPAQPTPN
  D39V            DGKDGRDGRDGRDGKDGKDGKCGCQDKPVTPSNDKPVPPTPNVPTPEVPVKPVPAQPTPN
                  ************************************************************
  
  D39             VPTPEVPVQPTPAVSTPEVPVKPVPAVPEQPVVPTPAQPATPVNANPVAPTTGKENRGDK
  D39V            VPTPEVPVQPTPAVSTPEVPVKPVPAVPEQPVVPTPAQPATPVNANPVAPTTGKENRGDK
                  ************************************************************
  
  D39             LPETGSQSDYISVLLGSGILLSLYVGRRKED
  D39V            LPETGSQSDYISVLLGSGILLSLYVGRRKED
                  *******************************