Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003383000
- symbol?: proV
- synonym:
- description?: ATP-binding cassette domain-containing protein
- ATP-binding cassette domain-containing protein
- Choline transport ATP-binding protein OpuBA
- ABC-type glycine betaine transport system ATP-binding protein
- glycine/betaine ABC transporter ATP-binding protein
- ABC transporter ATP-binding protein
- choline transporter
- ABC transporter, ATP-binding protein
- ABC transporter ATP-binding protein - choline transporter
- ABC transporter family protein
- ABC-type proline/glycine betaine transport systems, ATPase component
- glycine betaine/L-proline ABC transporter, ATP-binding protein
- Glycine betaine/L-proline transport ATP-binding protein ProV
- L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1)
descriptions from strain specific annotations:
- strand?: -
- coordinates?: 4440005..4440733
- occurrence?: in 98% of 43 strains
⊟Orthologs[edit | edit source]
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYM
D39 MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYM
D39V MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYM
Hungary19A-6 MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYM
EF3030 MIEYKNVALRYTEKDVLRDVNLQIEDGEFMVLVGPSGSGKTTMLKMINRLLEPTDGNIYM
************************************************************
TIGR4 DGKRIKDYDERELRLSTGYVLQAIALFPNLTVAENIALIPEMKGWSKEEITKKTEELLAK
D39 DGKRIKDYDERELRLSTGYVLQAIALFPNLTVEENIALIPEMKGWTKEEIAQKTEELLAK
D39V DGKRIKDYDERELRLSTGYVLQAIALFPNLTVEENIALIPEMKGWTKEEIAQKTEELLAK
Hungary19A-6 DGKRIKDYDERELRLSTGYVLQAIALFPNLTVAENIALIPEMKGWSKEEITKKTEELLAK
EF3030 DGKRIKDYDERELRLSTGYVLQAIALFPNLTVAENIALIPEMKGRSKEEITKKTEELLAK
******************************** *********** :****::********
TIGR4 VGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKIFLMDEPFSALDAISRKQLQVLTKE
D39 VGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKILLMDEPFSALDAISRKQLQVLTKE
D39V VGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKILLMDEPFSALDAISRKQLQVLTKE
Hungary19A-6 VGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKIFLMDEPFSALDAISRKQLQVLTKE
EF3030 VGLPVAEYGHRLPSELSGGEQQRVGIVRAMIGQPKIFLMDEPFSALDAISRKQLQVLTKE
************************************:***********************
TIGR4 LHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVANPETILKAPATDFVADLFGGSV
D39 LHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVSNPETILKAPATDFVADLFGGSI
D39V LHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVSNPETILKAPATDFVADLFGGSI
Hungary19A-6 LHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVANPETILKAPATDFVADLFGGSV
EF3030 LHKEFGMTTIFVTHDTDEALKLADRIAVLQDGEIRQVANPETILKAPATDFVADLFGGSV
*************************************:*********************:
TIGR4 HD
D39 HD
D39V HD
Hungary19A-6 HD
EF3030 HD
**