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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
⊟Summary[edit | edit source]
- pan ID?: PNEUPAN003748000
- symbol?: pnpS
- synonym:
- description?: two-component system histidine kinase PnpS
- two-component system histidine kinase PnpS
- histidine kinase PnpS
- putative alkaline phosphatase synthesis sensor protein
- sensor histidine kinase PnpS
- two-component sensor histidine kinase
- Alkaline phosphatase synthesis sensor protein
- Histidine kinase
- Adaptive-response sensory-kinase SasA
- ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
- ATP-binding protein
- his Kinase A domain protein
- PnpS histidine kinase TCS04
- Signal transduction histidine kinase
- Two-component system sensor histidine kinase PnpS
- Two component system sensor histidine kinase PnpS; Phosphate regulon sensor protein PhoR (SphS)
descriptions from strain specific annotations:
- strand?: +
- coordinates?: 4897725..4899056
- occurrence?: in 100% of 43 strains
⊟Orthologs[edit | edit source]
(12F)
ASP0581:
EL334_RS10870 (pnpS)
(19F)
ATCC 49619:
EL263_RS10410 (pnpS)
(23F)
ATCC 700669:
SPN23F_RS10860 (pnpS)
(14)
INV200:
SPNINV200_RS10285 (pnpS)
(14)
JJA:
SPJ_RS10440 (pnpS)
(19F)
MDRSPN001:
MDRSPN_RS09965 (pnpS)
(19A)
SP49:
BMJ42_RS11375 (pnpS)
(1)
SPN032672:
SPN032672_RS05305 (pnpS)
(3)
SPN034156:
SPN034156_RS05200 (pnpS)
(3)
SPN034183:
SPN034183_RS10210 (pnpS)
(3)
SPN994038:
SPN994038_RS10120 (pnpS)
(3)
SPN994039:
SPN994039_RS10125 (pnpS)
⊟Genome Viewer[edit | edit source]
| TIGR4 | |
| D39 | |
| D39V | |
| Hungary19A-6 | |
| EF3030 |
⊟Alignments[edit | edit source]
- alignment of orthologues: CLUSTAL format alignment by MAFFT L-INS-i (v7.505)
TIGR4 MKRYLQFWLVNLSVSLILIAGMALTWISKGIGLFLLALSLGLGGYWLFCLWKWEVAFETL
D39 MKRYLQFWLVNLSVSLILIAGMALTWISKGIGLFLLALSLGQGGYWLFCLWKWEVAFETL
D39V MKRYLQFWLVNLSVSLILIAGMALTWISKGIGLFLLALSLGQGGYWLFCLWKWEVAFETL
Hungary19A-6 MKRYLQFWLVNLSVSLILIAGMALTWISKGIGLFLLALSLGLGGYWLFCLWKWEVAFETL
EF3030 MKRYLQFWLVNLSVSLILIAGMALTWISKGIGLFLLALSLGQGGYWLFCLWKWEVAFETL
***************************************** ******************
TIGR4 HQPLLTSSEYFLEKGQEDLKSLAQYVSGLKTKVSQQDQQYKDLAETMEVLLSHLTMGTFL
D39 HQPLLTSSEYFLEKGQEDLKSLAQYVSALKTKVSQQDQQYKDLAETMEVLLSHLTMGTFL
D39V HQPLLTSSEYFLEKGQEDLKSLAQYVSALKTKVSQQDQQYKDLAETMEVLLSHLTMGTFL
Hungary19A-6 HQPLLTSSEYFLEKGQEDLKSLAQYVSGLKTKVSQQDQQYKDLAETMEVLLSHLTMGTFL
EF3030 HQPLLTSSEYFLEKGQEDLKSLAQYVSGLKTKVSQQDQQYKDLAETMEVLLSHLTMGTFL
***************************.********************************
TIGR4 VSAQGQMLLSSRSLPHYFPDVDGDISSLDDLKRMDIRNLVHQAFDQKTRLKQEVSGFHEG
D39 VSAQGQMLLSSRSLPHYFPDVDGDISSLDDLKRMDIRNLVHQAFDQKTRLKQEVSGFHEG
D39V VSAQGQMLLSSRSLPHYFPDVDGDISSLDDLKRMDIRNLVHQAFDQKTRLKQEVSGFHEG
Hungary19A-6 VSAQGQMLLSSRSLPHYFPDVDGDISSLDDLKRMDIRNLVHQAFDQKTRLKQEVSGFHEG
EF3030 VSAQGQMLLSSRSLPHYFPDVDGDISSLDDLKRMDIRNLVHQAFDQKTRLKQEVSGFHEG
************************************************************
TIGR4 DLILEVTAVPVFSPTQSVEAVLVLLYDLTTIRTYEKLNLAFVSNASHELRTPVTSIKGFA
D39 DLILEVTAVPVFSPTQSVEAVLVLLYDLTTIRTYEKLNLAFVSNASHELRTPVTSIKGFA
D39V DLILEVTAVPVFSPTQSVEAVLVLLYDLTTIRTYEKLNLAFVSNASHELRTPVTSIKGFA
Hungary19A-6 DLILEVTAVPVFSPTQSVEAVLVLLYDLTTIRTYEKLNLAFVSNASHELRTPVTSIKGFA
EF3030 DLILEVTAVPVFSPTQSVEAVLVLLYDLTTIRTYEKLNLAFVSNASHELRTPVTSIKGFA
************************************************************
TIGR4 ETIKGMSAEEEALKDDFLDIIYKESLRLEHIVEHLLTLSKAQQMPIQWTTLSLAEFVQDL
D39 ETIKGMSAEEEALKDDFLDIIYKESLRLEHIVEHLLTLSKAQQMPIQWTTLSLAEFVQDL
D39V ETIKGMSAEEEALKDDFLDIIYKESLRLEHIVEHLLTLSKAQQMPIQWTTLSLAEFVQDL
Hungary19A-6 ETIKGMSAEEEALKDDFLDIIYKESLRLEHIVEHLLTLSKAQQMPIQWTTLSLAEFVQDL
EF3030 ETIKGMSAEEEALKDDFLDIIYKESLRLEHIVEHLLTLSKAQQMPIQWTTLSLAEFVQDL
************************************************************
TIGR4 TQSLQPQLKKKDLQLKVQVPDDVTLVSDSQLLSQILLNLLSNAIRYTEQGGKIEVKTQKV
D39 TQSLQPQLKKKDLQLKVQVPDDVTLVSDSQLLSQILLNLLSNAIRYTEQGGKIEVKTQKV
D39V TQSLQPQLKKKDLQLKVQVPDDVTLVSDSQLLSQILLNLLSNAIRYTEQGGKIEVKTQKV
Hungary19A-6 TQSLQPQLKKKDLQLKVQVPDDVTLVSDSQLLSQILLNLLSNAIRYTEQGGKIEVKTQKV
EF3030 TQSLQPQLKKKDLQLKVQVPDDVTLVSDSQLLSQILLNLLSNAIRYTEQGGKIEVKTQKV
************************************************************
TIGR4 NEGIKISVSDTGIGISQLEQDRIFERFYRVNKGRSRQTGGTGLGLAIVKELSQLLGGQVT
D39 NEGIKISVSDTGIGISQLEQDRIFERFYRVNKGRSRQTGGTGLGLAIVKELSQLLGGQVT
D39V NEGIKISVSDTGIGISQLEQDRIFERFYRVNKGRSRQTGGTGLGLAIVKELSQLLGGQVT
Hungary19A-6 NEGIKISVSDTGIGISQLEQDRIFERFYRVNKGRSRQTGGTGLGLAIVKELSQLLGGQVT
EF3030 NEGIKISVSDTGIGISQLEQDRIFERFYRVNKGRSRQTGGTGLGLAIVKELSQLLGGQVT
************************************************************
TIGR4 VTSQLGRGSCFTIFLPNQSFAQD
D39 VTSQLGRGSCFTIFLPNQSFAQD
D39V VTSQLGRGSCFTIFLPNQSFAQD
Hungary19A-6 VTSQLGRGSCFTIFLPNQSFAQD
EF3030 VTSQLGRGSCFTIFLPNQSFAQD
***********************