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serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 17-JAN-2018

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae AP200
  • locus tag: SPAP_0932 [new locus tag: SPAP_RS04635 ]
  • pan locus tag?: PNEUPAN001877000
  • symbol: SPAP_0932
  • pan gene symbol?: —
  • synonym:
  • product: hypothetical protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPAP_0932 [new locus tag: SPAP_RS04635 ]
  • symbol: SPAP_0932
  • product: hypothetical protein
  • replicon: chromosome
  • strand: +
  • coordinates: 892092..892808
  • length: 717
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    ATGAAAAAATATTTTATTGGCGGTTTGGGAAGCAATGCCTATCATAGCAAGGATTTTCTT
    CAAGAACTAGATTCGCAGGTCTATTTTCTAAATCCATATGAAAAGCATCTTCGAGATGAA
    ACAGAATTGAAATCATGGTTTAAAAATGAGATTGTAGAGGAAGAATTTATCTGTCTGATA
    GGTCATTCTCTTGGAGGAGATTTAGCTCGTTATCTCGCATCGGAATTTGAAGAAGTAAAG
    AAACTGATTCTTTTGGATGGTGGCTATCTAGATTTAGATAAGATTTTACCTTTGGATACA
    GAGTTAGAGGAAACTAAAAATTATATCAAATCTCAAATTGTTTTGGACTTAGATGTTCTT
    ACTTCTAAAGAAAAATCTGAAGCAAAGCATTGGTCAGAAAATATGGAGAAAGCTGTAAGA
    CAGTCCTATCACTGGAATGTTGAGTATAATAGATATGAGTTGGCTATAAATTATGAAAAT
    ATAGAAGCGATACTCCGCCTACGGAGAAAAATACAAGCTTTTAAGAGAGAAGTGGGAGAT
    ACCTTGTTTATTAGTCCTCGCTATCCTAATGAAGCTACATGGAGAGAGGAAGCCCTAAAA
    GAATTGCCAGACTATTTTGATACTATTTTTTTAGAAAACTTTGGCCATGAGCTTTATACT
    CAAGCACCTAAAGAAATCGCTAGTCTAATGAATGAGTGGCTCGCTTATTTTCTATGA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    717

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPAP_0932 [new locus tag: SPAP_RS04635 ]
  • symbol: SPAP_0932
  • description: hypothetical protein
  • length: 238
  • theoretical pI: 4.63651
  • theoretical MW: 28245.8
  • GRAVY: -0.508403

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Menaquinone and ubiquinone 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (TIGR03695; EC 4.2.99.20; HMM-score: 17.7)
    and 1 more
    Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Glutathione and analogs putative glutamate--cysteine ligase (TIGR02048; EC 6.3.2.2; HMM-score: 11.7)
  • TheSEED  :
    • FIG01114816: hypothetical protein
  • PFAM:
    AB_hydrolase (CL0028) Abhydrolase_1; alpha/beta hydrolase fold (PF00561; HMM-score: 22.5)
    BAAT_C; BAAT / Acyl-CoA thioester hydrolase C terminal (PF08840; HMM-score: 20.9)
    Palm_thioest; Palmitoyl protein thioesterase (PF02089; HMM-score: 18)
    and 8 more
    UPF0227; Uncharacterised protein family (UPF0227) (PF05728; HMM-score: 15.1)
    Lipase_3; Lipase (class 3) (PF01764; HMM-score: 14.5)
    PGAP1; PGAP1-like protein (PF07819; HMM-score: 14.2)
    DLH; Dienelactone hydrolase family (PF01738; HMM-score: 12.9)
    Hydrolase_4; Serine aminopeptidase, S33 (PF12146; HMM-score: 12.8)
    no clan defined NdhM; Cyanobacterial and plastid NDH-1 subunit M (PF10664; HMM-score: 12.7)
    AB_hydrolase (CL0028) Abhydrolase_3; alpha/beta hydrolase fold (PF07859; HMM-score: 12.5)
    Mbeg1-like; Mbeg1-like (PF11187; HMM-score: 12.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 7.5
    • Cytoplasmic Membrane Score: 1.15
    • Cellwall Score: 0.62
    • Extracellular Score: 0.73
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9751
    • Cytoplasmic Membrane Score: 0.0043
    • Cell wall & surface Score: 0.0007
    • Extracellular Score: 0.0199
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.004146
    • TAT(Tat/SPI): 0.000078
    • LIPO(Sec/SPII): 0.000468
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: ADM84521 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MKKYFIGGLGSNAYHSKDFLQELDSQVYFLNPYEKHLRDETELKSWFKNEIVEEEFICLIGHSLGGDLARYLASEFEEVKKLILLDGGYLDLDKILPLDTELEETKNYIKSQIVLDLDVLTSKEKSEAKHWSENMEKAVRQSYHWNVEYNRYELAINYENIEAILRLRRKIQAFKREVGDTLFISPRYPNEATWREEALKELPDYFDTIFLENFGHELYTQAPKEIASLMNEWLAYFL

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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