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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 17-JAN-2018
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae AP200
- locus tag: SPAP_1095 [new locus tag: SPAP_RS05430 ]
- pan locus tag?: PNEUPAN002246000
- symbol: SPAP_1095
- pan gene symbol?: ppnK
- synonym:
- product: Predicted sugar kinase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPAP_1095 [new locus tag: SPAP_RS05430 ]
- symbol: SPAP_1095
- product: Predicted sugar kinase
- replicon: chromosome
- strand: -
- coordinates: 1046227..1047057
- length: 831
- essential: unknown other strains
⊟Accession numbers[edit | edit source]
- Location: CP002121 (1046227..1047057) NCBI
- BioCyc: see SPAP_RS05430
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0983 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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781GTGACGATACAGATGAAGAATACAGGTAAACGAATTGATCTGATAGCCAATAGAAAACCG
CAGAGTCAAAGGGTTTTGTATGAATTGCGAGATCGTTTGAAGAGAAATCAGTTTATACTC
AATGATACCAATCCGGATATTGTCATTTCCATTGGCGGGGATGGTATGCTCTTGTCGGCC
TTTCATAAGTACGAAAATCAGCTTGACAAGGTCCGCTTTATCGGTCTTCATACTGGACAT
TTGGGCTTCTATACAGATTATCGTGATTTTGAGTTGGACAAGCTAGTGACTAATTTGCAG
CTAGATACTGGGGCAAGGGTTTCTTACCCTGTTCTGAATGTGAAGGTCTTTCTTGAAAAT
GGTGAAGTTAAGATTTTCAGAGCACTCAACGAAGCCAGCATCCGCAGGTCTGATCGAACC
ATGGTGGCAGATATTGTAATAAATGGTGTTCCCTTTGAACGTTTTCGTGGAGACGGGCTA
ACAGTTTCGACACCGACTGGTAGTACTGCCTATAACAAGTCTCTTGGCGGTGCTGTTTTA
CACCCTACCATTGAAGCTTTGCAATTAACGGAAATTGCCAGCCTTAATAATCGTGTTTAT
CGAACACTGGGCTCTTCCATTATTGTGCCTAAGAAGGATAAGATTGAACTTATTCCAACA
AGAAACGATTATCATACTATTTCGGTTGACAATAGCGTTTATTCTTTCCGTAATATTGAG
CGTATTGAGTATCAAATCGACCATCATAAGATTCACTTTGTCGCGACTCCTAGCCATACC
AGTTTCTGGAACCGTGTTAAGGATGCCTTTATCGGTGAGGTGGATGAATGA60
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831
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPAP_1095 [new locus tag: SPAP_RS05430 ]
- symbol: SPAP_1095
- description: Predicted sugar kinase
- length: 276
- theoretical pI: 9.37752
- theoretical MW: 31508.6
- GRAVY: -0.338768
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED :
- NAD kinase (EC 2.7.1.23)
- PFAM: NAD_kinase_C (CL0701) NAD_kinase_C; ATP-NAD kinase C-terminal domain (PF20143; HMM-score: 45.3)and 2 morePFK (CL0240) NAD_kinase; ATP-NAD kinase N-terminal domain (PF01513; HMM-score: 24.4)Zn_Beta_Ribbon (CL0167) DUF1936; Domain of unknown function (DUF1936) (PF09151; HMM-score: 12.6)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.67
- Cytoplasmic Membrane Score: 0.01
- Cellwall Score: 0.15
- Extracellular Score: 0.17
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.002438
- TAT(Tat/SPI): 0.000146
- LIPO(Sec/SPII): 0.000357
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: ADM84684 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MTIQMKNTGKRIDLIANRKPQSQRVLYELRDRLKRNQFILNDTNPDIVISIGGDGMLLSAFHKYENQLDKVRFIGLHTGHLGFYTDYRDFELDKLVTNLQLDTGARVSYPVLNVKVFLENGEVKIFRALNEASIRRSDRTMVADIVINGVPFERFRGDGLTVSTPTGSTAYNKSLGGAVLHPTIEALQLTEIASLNNRVYRTLGSSIIVPKKDKIELIPTRNDYHTISVDNSVYSFRNIERIEYQIDHHKIHFVATPSHTSFWNRVKDAFIGEVDE
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0983 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.