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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 07-FEB-2021
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae AP200
- locus tag: SPAP_RS10165 [old locus tag: SPAP_2052 ]
- pan locus tag?: PNEUPAN003633000
- symbol: adhE
- pan gene symbol?: adhE
- synonym:
- product: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPAP_RS10165 [old locus tag: SPAP_2052 ]
- symbol: adhE
- product: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
- replicon: chromosome
- strand: -
- coordinates: 1907738..1910389
- length: 2652
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_014494 (1907738..1910389) NCBI
- BioCyc: SPAP_RS10165 BioCyc
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1834 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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2641ATGGCTGATAAAAAAACTGTGACACCAGAGGAAAAGAAACTCGTTGCTGAAAAACACGTA
GATGAGTTGGTTCAAAAAGCTCTAGTTGCCCTTGAAGAAATGCGTAAATTGGATCAAGAA
CAAGTTGACTACATCGTTGCCAAAGCATCAGTAGCAGCTTTGGATGCCCACGGAGAATTG
GCTTTACATGCCTTTGAAGAAACAGGACGTGGTGTATTTGAAGACAAAGCAACTAAGAAC
TTGTTTGCCTGTGAACACGTAGTAAACAACATGCGCCACACTAAGACAGTTGGCGTTATC
GAAGAAGACGATGTAACAGGATTGACTCTTATTGCTGAACCAGTTGGTGTTGTTTGTGGT
ATTACTCCAACAACAAACCCAACATCAACAGCAATCTTCAAATCATTGATTTCATTGAAG
ACACGTAACCCAATCGTCTTTGCCTTCCATCCATCAGCACAAGAATCATCTGCTCATGCA
GCTCGTATCGTCCGCGATGCAGCTATCGCAGCTGGTGCTCCTGAAAACTGTGTGCAATGG
ATTACTCAACCATCTATGGAAGCAACAAGTGCCCTTATGAACCACGAAGGTGTTGCGACA
ATCCTTGCAACAGGTGGTAATGCCATGGTTAAGGCGGCTTATTCATGTGGTAAACCAGCT
CTTGGGGTAGGTGCCGGAAACGTTCCAGCTTATGTTGAAAAATCAGCAAACATTCGTCAA
GCAGCACACGATATCGTCATGTCTAAATCATTTGATAACGGTATGGTCTGTGCATCTGAA
CAAGCAGTTATCATTGATAAAGAAATTTACGATGAATTTGTAGCAGAGTTCAAATCTTAC
CACACTTACTTTGTAAGCAAAAAAGAAAAAGCTCTTCTTGAAGAGTTCTGCTTCGGCGTC
AAAGCAAACAGCAAAAACTGTGCTGGTGCAAAATTGAACGCTGACATCGTTGGTAAACCA
GCAACTTGGATTGCAGAACAAGCAGGATTTACAGTTCCAGAAGGAACAAACATTCTTGCT
GCAGAATGTAAAGAAGTTGGCGAAAATGAGCCATTGACTCGTGAAAAATTGTCACCAGTT
ATTGCAGTTTTGAAATCTGAAAGCCGTGAAGATGGTATTACTAAGGCTCGTCAAATGGTT
GAATTTAACGGTCTTGGACACTCAGCAGCTATCCACACAGCTGACGAAGAATTGACTAAA
GAATTTGGTAAAGCTGTTAAAGCTATTCGTGTTATCTGTAACTCACCTTCTACTTTTGGT
GGTATCGGGGACGTTTACAATGCCTTCTTGCCATCATTGACACTTGGATGTGGTTCTTAC
GGACGCAACTCAGTTGGGGATAACGTTAGTGCCATTAACCTCTTGAATATCAAAAAAGTC
GGAAGACGGAGAAATAACATGCAATGGATGAAACTTCCTTCAAAAACATACTTTGAACGT
GATTCAATTCAATACCTTCAAAAATGTCGTGACGTTGAACGTGTCATGATCGTTACTGAC
CATGCCATGGTAGAGCTTGGTTTCCTTGATCGTATCATCGAACAACTGGACCTTCGTCGC
AATAAGGTTGTTTACCAAATCTTTGCGGATGTAGAACCGGATCCAGATATCACAACTGTA
AACCGTGGTACTGAGATTATGCGTGCCTTCAAACCAGATACCATCATCGCACTCGGTGGT
GGGTCTCCAATGGATGCTGCCAAAGTAATGTGGCTCTTCTACGAGCAACCAGAAGTGGAC
TTCCGTGACCTTGTCCAAAAATTCATGGATATCCGTAAACGTGCCTTCAAGTTCCCATTG
CTTGGTAAGAAGACTAAATTCATCGCGATTCCAACTACATCTGGTACAGGATCTGAAGTA
ACACCATTTGCCGTTATCTCTGATAAAGCAAACAACCGTAAATACCCAATCGCTGACTAC
TCATTGACACCAACTGTGGCAATCGTAGATCCTGCTTTGGTATTGACAGTTCCAGGATTT
GTTGCTGCTGATACTGGTATGGACGTATTGACTCACGCGACAGAAGCATACGTATCACAA
ATGGCTAGTGACTACACTGATGGTTTAGCACTTCAAGCCATTAAATTGGTCTTTGAAAAT
CTCGAAAGCTCAGTTAAGAATGCAGACTTCCACTCACGTGAGAAAATGCATAACGCTTCA
ACAATCGCTGGTATGGCCTTTGCCAATGCCTTCCTAGGTATTTCTCACTCAATGGCCCAT
AAGATTGGTGCGCAATTCCACACAATCCACGGTCGTACAAATGCTATCTTGCTTCCATAC
GTTATCCGTTACAACGGTACACGTCCAGCTAAGACAGCAACATGGCCTAAGTACAACTAC
TACCGTGCAGATGAAAAATACCAAGATATCGCACGCATGCTTGGACTTCCAGCTTCTACT
CCAGAAGAAGGGGTTGAATCTTACGCAAAAGCTGTCTACGAACTCGGTGAACGTATTGGG
ATCCAAATGAATTTTAGAGACCAAGGAATTGACGAAAAAGAATGGAAAGAACATTCTCGT
GAATTAGCCTTCCTGGCTTATGAAGACCAATGTTCACCAGCTAACCCACGTCTTCCAATG
GTAGACCATATGCAAGAAATCATCGAAGATGCATACTATGGCTACAAAGAAAGACCAGGA
CGCCGTAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPAP_RS10165 [old locus tag: SPAP_2052 ]
- symbol: AdhE
- description: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
- length: 883
- theoretical pI: 6.44559
- theoretical MW: 97259.5
- GRAVY: -0.210306
⊟Function[edit | edit source]
- reaction: EC 1.1.1.1? ExPASyAlcohol dehydrogenase A primary alcohol + NAD+ = an aldehyde + NADH A secondary alcohol + NAD+ = a ketone + NADHEC 1.2.1.10? ExPASyAcetaldehyde dehydrogenase (acetylating) Acetaldehyde + CoA + NAD+ = acetyl-CoA + NADH
- TIGRFAM: acetaldehyde dehydrogenase (acetylating) (TIGR02518; EC 1.2.1.10; HMM-score: 463.2)and 15 moreEnergy metabolism Sugars lactaldehyde reductase (TIGR02638; EC 1.1.1.77; HMM-score: 284.7)phosphonate metabolism-associated iron-containing alcohol dehydrogenase (TIGR03405; HMM-score: 178.1)NDMA-dependent methanol dehydrogenase (TIGR04266; EC 1.1.99.37; HMM-score: 119.8)Amino acid biosynthesis Glutamate family glutamate-5-semialdehyde dehydrogenase (TIGR00407; EC 1.2.1.41; HMM-score: 58.1)Cellular processes Adaptations to atypical conditions betaine-aldehyde dehydrogenase (TIGR01804; EC 1.2.1.8; HMM-score: 53)5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase (TIGR02299; EC 1.2.1.60; HMM-score: 41.6)Central intermediary metabolism Other succinate-semialdehyde dehydrogenase (TIGR01780; EC 1.2.1.-; HMM-score: 39.5)Energy metabolism Amino acids and amines succinylglutamate-semialdehyde dehydrogenase (TIGR03240; EC 1.2.1.71; HMM-score: 36.1)Energy metabolism Amino acids and amines putative delta-1-pyrroline-5-carboxylate dehydrogenase (TIGR01237; EC 1.2.1.88; HMM-score: 30.7)putative phosphonoacetaldehyde dehydrogenase (TIGR03250; EC 1.2.1.-; HMM-score: 29.5)Energy metabolism Other 2-hydroxymuconic semialdehyde dehydrogenase (TIGR03216; EC 1.2.1.-; HMM-score: 29.3)Energy metabolism Amino acids and amines methylmalonate-semialdehyde dehydrogenase (acylating) (TIGR01722; EC 1.2.1.27; HMM-score: 25)phenylacetic acid degradation protein paaN (TIGR02288; HMM-score: 24.4)Unknown function Enzymes of unknown specificity aldehyde dehydrogenase, Rv0768 family (TIGR04284; EC 1.2.1.-; HMM-score: 20.3)1-pyrroline dehydrogenase (TIGR03374; EC 1.2.1.19; HMM-score: 18.9)
- TheSEED: see SPAP_2052
- PFAM: DHQS (CL0224) Fe-ADH; Iron-containing alcohol dehydrogenase (PF00465; HMM-score: 384.8)and 3 moreALDH-like (CL0099) Aldedh; Aldehyde dehydrogenase family (PF00171; HMM-score: 95.6)DHQS (CL0224) Fe-ADH_2; Iron-containing alcohol dehydrogenase (PF13685; HMM-score: 60.4)TBP-like (CL0407) AdoMet_dc; S-adenosylmethionine decarboxylase (PF02675; HMM-score: 12.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.97
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 0.01
- Extracellular Score: 0.02
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001934
- TAT(Tat/SPI): 0.000471
- LIPO(Sec/SPII): 0.000265
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000763977 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MADKKTVTPEEKKLVAEKHVDELVQKALVALEEMRKLDQEQVDYIVAKASVAALDAHGELALHAFEETGRGVFEDKATKNLFACEHVVNNMRHTKTVGVIEEDDVTGLTLIAEPVGVVCGITPTTNPTSTAIFKSLISLKTRNPIVFAFHPSAQESSAHAARIVRDAAIAAGAPENCVQWITQPSMEATSALMNHEGVATILATGGNAMVKAAYSCGKPALGVGAGNVPAYVEKSANIRQAAHDIVMSKSFDNGMVCASEQAVIIDKEIYDEFVAEFKSYHTYFVSKKEKALLEEFCFGVKANSKNCAGAKLNADIVGKPATWIAEQAGFTVPEGTNILAAECKEVGENEPLTREKLSPVIAVLKSESREDGITKARQMVEFNGLGHSAAIHTADEELTKEFGKAVKAIRVICNSPSTFGGIGDVYNAFLPSLTLGCGSYGRNSVGDNVSAINLLNIKKVGRRRNNMQWMKLPSKTYFERDSIQYLQKCRDVERVMIVTDHAMVELGFLDRIIEQLDLRRNKVVYQIFADVEPDPDITTVNRGTEIMRAFKPDTIIALGGGSPMDAAKVMWLFYEQPEVDFRDLVQKFMDIRKRAFKFPLLGKKTKFIAIPTTSGTGSEVTPFAVISDKANNRKYPIADYSLTPTVAIVDPALVLTVPGFVAADTGMDVLTHATEAYVSQMASDYTDGLALQAIKLVFENLESSVKNADFHSREKMHNASTIAGMAFANAFLGISHSMAHKIGAQFHTIHGRTNAILLPYVIRYNGTRPAKTATWPKYNYYRADEKYQDIARMLGLPASTPEEGVESYAKAVYELGERIGIQMNFRDQGIDEKEWKEHSRELAFLAYEDQCSPANPRLPMVDHMQEIIEDAYYGYKERPGRRK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1834 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
Truc Thanh Luong, Eun-Hye Kim, Jong Phil Bak, Cuong Thach Nguyen, Sangdun Choi, David E Briles, Suhkneung Pyo, Dong-Kwon Rhee
Ethanol-induced alcohol dehydrogenase E (AdhE) potentiates pneumolysin in Streptococcus pneumoniae.
Infect Immun: 2015, 83(1);108-19
[PubMed:25312953] [WorldCat.org] [DOI] (I p)