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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 24-JAN-2021
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae CGSP14
- locus tag: SPCG_RS10605 [old locus tag: SPCG_2014 ]
- pan locus tag?: PNEUPAN003610000
- symbol: SPCG_RS10605
- pan gene symbol?: comGG
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPCG_RS10605 [old locus tag: SPCG_2014 ]
- symbol: SPCG_RS10605
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 1997548..1997994
- length: 447
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_010582 (1997548..1997994) NCBI
- BioCyc: SPCG_RS10605 BioCyc
- MicrobesOnline: see SPCG_2014
- PneumoBrowse for strain D39V: SPV_1857 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421GTGTGGAAAAAGAAGAAAGTTAAGGCAGGTGTTCTCCTCTACGCAGTCACCATAGCAGCC
ATCTTTAGTCTTTTGTTGCAATTTTATTTGAACCGACAAATCGCCCACTATCAAGACTAT
GCTTTAAATAAAGAAAAATTGGTTGCTTTTGCCATGGCTAAACGAACCAAGGATAAAGCC
GAGCAAGAAAGTGGGGAACAGGTTTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
ACAAGCTTGGTGACGACTGTTCGTACGTCTAAGAGCCAATATGAGTTTCTGTTTCCTTCA
GTCAAAATCAAAGAAGAGAAAAGAGATAAAAAGGAAGAGGTAGCGACCGATTCAAGCGAA
AAAGCGGAGAAAAAAAATCAGAAGAGAAGCCTGAAAAGAAAGAGAATTCCTAGTCAATTC
AACTATAATGCGTTGAATCCAGAATAG60
120
180
240
300
360
420
447
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPCG_RS10605 [old locus tag: SPCG_2014 ]
- symbol: SPCG_RS10605
- description: hypothetical protein
- length: 148
- theoretical pI: 10.558
- theoretical MW: 17229.8
- GRAVY: -0.785811
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SPCG_2014
- PFAM: no clan defined ComGG; ComG operon protein 7 (PF14173; HMM-score: 16.4)RPC5_C; DNA-directed RNA polymerase III subunit RPC5 C-terminal (PF19725; HMM-score: 15.4)NTF2 (CL0051) DUF5104; Domain of unknown function (DUF5104) (PF17117; HMM-score: 14.9)no clan defined PY_rept_46; Plasmodium yoelii repeat (PY_rept_46) (PF09689; HMM-score: 13.3)and 1 moreHMG-box (CL0114) YABBY; YABBY protein (PF04690; HMM-score: 11.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0.32
- Cytoplasmic Membrane Score: 9.55
- Cellwall Score: 0.12
- Extracellular Score: 0.01
- Internal Helix: 1
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.067565
- TAT(Tat/SPI): 0.001441
- LIPO(Sec/SPII): 0.008693
- predicted transmembrane helices (TMHMM): 1
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MWKKKKVKAGVLLYAVTIAAIFSLLLQFYLNRQIAHYQDYALNKEKLVAFAMAKRTKDKAEQESGEQVFNLGQVSYQNKKTSLVTTVRTSKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKAEKKNQKRSLKRKRIPSQFNYNALNPE
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1857 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.