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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 16-DEC-2024
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae CGSP14
- locus tag: SPCG_RS10855 [old locus tag: SPCG_2048 ]
- pan locus tag?: PNEUPAN003747000
- symbol: SPCG_RS10855
- pan gene symbol?: pnpR
- synonym:
- product: response regulator transcription factor
⊟Additional information (user-provided)[edit | edit source]
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS, pseudogene
- locus tag: SPCG_RS10855 [old locus tag: SPCG_2048 ]
- symbol: SPCG_RS10855
- product: response regulator transcription factor
- replicon: chromosome
- strand: +
- coordinates: 2037955..2038661
- length: 707
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_010582 (2037955..2038661) NCBI
- BioCyc: SPCG_RS10855 BioCyc
- MicrobesOnline: see SPCG_2048
- PneumoBrowse for strain D39V: SPV_1908 PneumoBrowse
⊟Phenotype[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟DNA sequence[edit | edit source]
- 1
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601
661ATGACAAAACAAGTCTTATTAGTGGATGATGAAGAACACATTCTGAAATTACTTGACTAC
CATTTAAGTAAGGAAGGCTTTTCTACTCAATTGGTAACAAATGGACGGAAGGCCTTAGCT
TTGGCAGAAACAGAACCCTTTGATTTTATCTTGCTTGATATCATGTTACCACAATTAGAT
GGCATGGAAGTTTGTAAGCGGCTGAGAGCCAAAGGCGTCAAAACTCCAATTATGATGGTT
TCTGCGAAAAGTGATGAATTTGATAAGGTTTTGGCCTTGGAATTAGGGGCTGATGACTAC
CTGACCAAGCCTTTTAGCCCTAGAGAATTGCTGGCGCGTGTCAAGGCTGTCCTCAGGCGA
ACTAAAGGAGAACAAGAAGGAGATGATTCAGATAATATCGCTGACGATTCTTGGCTATTT
GGGACCTTGAAAGTATACCCTGAGCGTCATGAAGTCTACAAGGCGAATAAGTTACTGAGT
TTGACCCCAAAAGAATTTGAACTCTTGCTCTATCTTATGAAACATCCCAACATGACACTG
ACTAGAGAGCGTCTTTTGGAACGTATCTGGGGGTATGACTTTGGGCAGGAAACACGTTTG
GTGGACGTTCATATTGGTAAGTTGAGGGAAAAAATTGAAGACAATCCTAAAGCCCCTCAA
TTATTCGAACCATCCGCCGTTATGGTCATAAGTTCAAGGAGTTATAG60
120
180
240
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360
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540
600
660
707
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPCG_RS10855 [old locus tag: SPCG_2048 ]
- symbol: SPCG_RS10855
- description: response regulator transcription factor
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SPCG_2048
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- DeepLocPro:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: see SPCG_2048
- UniProt:
⊟Additional information (user-provided)[edit | edit source]
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Additional information (user-provided)[edit | edit source]
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1908 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟'lacZ' fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Additional information (user-provided)[edit | edit source]
⊟Other information (user-provided)[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
J McCluskey, J Hinds, S Husain, A Witney, T J Mitchell
A two-component system that controls the expression of pneumococcal surface antigen A (PsaA) and regulates virulence and resistance to oxidative stress in Streptococcus pneumoniae.
Mol Microbiol: 2004, 51(6);1661-75
[PubMed:15009893] [WorldCat.org] [DOI] (P p)Jiaqi J Zheng, Dhriti Sinha, Kyle J Wayne, Malcolm E Winkler
Physiological Roles of the Dual Phosphate Transporter Systems in Low and High Phosphate Conditions and in Capsule Maintenance of Streptococcus pneumoniae D39.
Front Cell Infect Microbiol: 2016, 6;63
[PubMed:27379215] [WorldCat.org] [DOI] (I e)