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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 24-APR-2024
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae G54
- locus tag: SPG_RS01810 [old locus tag: SPG_0356 ]
- pan locus tag?: PNEUPAN001232000
- symbol: cbpG
- pan gene symbol?: cbpG
- synonym:
- product: choline-binding protein CbpG
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPG_RS01810 [old locus tag: SPG_0356 ]
- symbol: cbpG
- product: choline-binding protein CbpG
- replicon: chromosome
- strand: +
- coordinates: 348711..349532
- length: 822
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_011072 (348711..349532) NCBI
- BioCyc: SPG_RS01810 BioCyc
- MicrobesOnline: see SPG_0356
- PneumoBrowse for strain D39V: SPV_0356 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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721
781ATGAATGTAGAAGGGAGGGGAAGTGCGAATTTTATTAAAGATAATGTGTTAATTACAGCG
GCTCACAACTACTACAGACATGACTATGGGAAAGAAGCGGATGATATTTATGTTCTTCCG
GCTGTTAGTCCAAGTCAAGAACCATTTGGAAAGATCAAAGTAAAGGAAGTTCGTTATTTG
AAGGAATTTAGAAATTTAAATTCTAAGGATGCAAGGGAATATGACTTGGCTTTATTAATT
CTAGAAGAGCCCATTGGTGCAAAATTAGGGACTTTGGGTCTTCCTACTAGTCAAAAAAAT
TTGACAGGAATAACTGTGACTATCACAGGCTATCCATCATATAATTTTAAAATTCATCAA
ATGTATACAGATAAAAAACAAGTTTTAAGTGATGATGGCATGTTCTTGGATTACCAAGTT
GATACTTTAGAGGGGTCTAGTGGATCTACAGTTTATGATGCTAGTCACCGTGTAGTAGGA
GTGCATACTTTAGGAGATGGAGCTAATCAAATTAACAGTGCAGTTAAATTAAATGAACGA
AATTTGCCATTTATTTATTCGGTTCTTAAAGGTTACTCTCTTGAAGGATGGAAGAAAATA
AATGGTAGTTGGTACCATTATAGACAACATGATAAACAAACGGGTTGGCAGGAGATAAAT
GATACTTGGTATTATTTAGACAGTTCCGGTAAGATGCTTACAGATTGGCAAAAAGTAAAT
GGAAAATGGTATTATCTCAATTCAAATGGAGCAATGGTTACAGGTAGCCAAACTATCGAT
GGTAAAGTTTATAACTTCGCTTCATCTGGTGAGTGGATTTAA60
120
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822
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPG_RS01810 [old locus tag: SPG_0356 ]
- symbol: CbpG
- description: choline-binding protein CbpG
- length: 273
- theoretical pI: 6.89925
- theoretical MW: 30946.4
- GRAVY: -0.545055
⊟Function[edit | edit source]
- TIGRFAM: glucan-binding repeat (TIGR04035; HMM-score: 47.7)and 1 moreRegulatory functions Protein interactions exported signaling peptide, YydF/SAG_2028 family (TIGR04077; HMM-score: 11.4)
- TheSEED: see SPG_0356
- PFAM: Choline_binding (CL0694) Choline_bind_1; Putative cell wall binding repeat (PF01473; HMM-score: 65)Choline_bind_3; Choline-binding repeat (PF19127; HMM-score: 64.7)and 6 morePeptidase_PA (CL0124) Trypsin; Trypsin (PF00089; HMM-score: 37.4)Trypsin_2; Trypsin-like peptidase domain (PF13365; HMM-score: 32.9)Choline_binding (CL0694) Choline_bind_2; Choline-binding repeat (PF19085; HMM-score: 22.4)Peptidase_PA (CL0124) Peptidase_S39; Peptidase S39 (PF02122; HMM-score: 16.4)PUA (CL0178) ASCH; ASCH domain (PF04266; HMM-score: 14.2)no clan defined CoV_S1_C; Coronavirus spike glycoprotein S1, C-terminal (PF19209; HMM-score: 12.9)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Extracellular
- Cytoplasmic Score: 0.01
- Cytoplasmic Membrane Score: 0.09
- Cellwall Score: 0.18
- Extracellular Score: 9.72
- Internal Helices: 0
- DeepLocPro: Extracellular
- Cytoplasmic Score: 0.0008
- Cytoplasmic Membrane Score: 0.0002
- Cell wall & surface Score: 0.0062
- Extracellular Score: 0.9927
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.015716
- TAT(Tat/SPI): 0.001537
- LIPO(Sec/SPII): 0.005806
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_001100143 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MNVEGRGSANFIKDNVLITAAHNYYRHDYGKEADDIYVLPAVSPSQEPFGKIKVKEVRYLKEFRNLNSKDAREYDLALLILEEPIGAKLGTLGLPTSQKNLTGITVTITGYPSYNFKIHQMYTDKKQVLSDDGMFLDYQVDTLEGSSGSTVYDASHRVVGVHTLGDGANQINSAVKLNERNLPFIYSVLKGYSLEGWKKINGSWYHYRQHDKQTGWQEINDTWYYLDSSGKMLTDWQKVNGKWYYLNSNGAMVTGSQTIDGKVYNFASSGEWI
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- see SPG_0356
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0356 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
B Mann, C Orihuela, J Antikainen, G Gao, J Sublett, T K Korhonen, E Tuomanen
Multifunctional role of choline binding protein G in pneumococcal pathogenesis.
Infect Immun: 2006, 74(2);821-9
[PubMed:16428724] [WorldCat.org] [DOI] (P p)