⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae JJA
- locus tag: SPJ_0148 [new locus tag: SPJ_RS00740 ]
- pan locus tag?: PNEUPAN000792000
- symbol: SPJ_0148
- pan gene symbol?: pspA
- synonym:
- product:
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: pseudogene
- locus tag: SPJ_0148 [new locus tag: SPJ_RS00740 ]
- symbol: SPJ_0148
- product:
- replicon: chromosome
- strand: +
- coordinates: 133644..135796
- length: 2153
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: CP000919 (133644..135796) NCBI
- BioCyc: see SPJ_RS00740
- MicrobesOnline: 7478430 MicrobesOnline
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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2101ATGAATAAGAAAAAAATGATTTTAACAAGTCTAGCCAGCGTCGCTATCTTAGGGGCTGGT
TTTGTTACGTCTCAGCCTACTTTTGTAAGAGCAGAAGAAGCTCCACAAGTTGTCGAAAAA
TCTTCATTAGAGAAGAAATATGAGGAAGCAAAAGCAAAAGCTGATACTGCCAAGAAAGAT
TACGAAACGGCTAAAAAGAAAGCAGAAGACGCTCAGAAGAAATATGATGAGGATCAGAAG
AAAACTGAAGAGAAAGCGAAAAAAGCAGAAGAAGCTGCTAAGGAAGTAGATGATGCTAGT
TTAGCGGTGCAAAAAGCTTATGTGGAACAAAGAAAAGCACAAGAAGAAAAAAATAAACAT
TCAGGAAATCCAGAGTACGCTAAAAAATTAGCAGAAGCAGATAAAAAAATAACTGAGGAG
ACGACTAAACTAACCGATGCTCAGACAAAATTTCAATCTGTTCAAGCAATGGTAGTTCCT
GAGCCAGAGCAGTTGGCTGAGACTAAGAAAAAAGCAGAAGAAGCTAAAGCAGAAGAAAAA
GTAGCTAAGAGAAAATATGATTATGCAACTCTAAAGGTAGTACTAGCGAAGAAAGAAGTA
GAGGCTAAGGAACTTGAAATTGAAAAACTTCAATATGAAATTTCTACTTTGGAACAAGAA
GTTGCTACTGCTCAACATCAAGTAGATAATTTGAAAAAACTTCTTGCTGGTGCGGATCCT
GATGATGGCACAGAAGTTATAGAAGCTAAATTAAAAAAAGGAGAAGCTGAGCTAAACGCT
AAACAAGCTGAGTTAGCAAAAAAACAAACAGAACTTGAAAAACTTCTTGACAGCCTTGAT
CCTGAAGGTAAGACTCAGGATGAATTAGATAAAGAAGCAGAAGAAGCTGAGTTGGATAAA
AAAGCTGATGAACTTCAAAATAAAGTTGCTGATTTAGAAAAAGAAATTAGTAACCTTGAA
ATATTACTTGGAGGGGCTGATCCTGAAGATGATACTGCTGCTCTTCAAAATAAATTAGCT
ACTAAAAAAGCTGAGTTAGCAAAAAAACAAACAGAACTTGAAAAACTTCTTGACAGCCTT
GATCCTGAAGGTAAGACTCAGGATGAATTAGATAAAGAAGCTGCTGAAGCTGAGTTGGAT
AAAAAAGTTGAAGCTCTTCAAAACAAAGTTGCTGATTTAGAAAAAGAAATTAGTAACCTT
GAAATATTACTTGGAGGGGCTGATTCTGAAGATGATACTGCTGCTCTTCAAAATAAATTA
GCTACTAAAAAAGCTGAATTGGAAAAAACTCAAAAAGAATTAGATGCAGCTCTTAATGAG
TTAGGCCCTGATGGAGATGAAGAAGAAACTCCAGCGCCGGCTCCTCAACCAGAGCAACCA
GCTCCAGCTCCTGCACCAAAACCAGAGCAACCAGCTCCAGCTCCTGCACCAAAACCAGAG
CAACCAGCTCCAGCTCCTGCACCAAAACCAGAGCAACCAGCTCCCGCACCAAAAACAGGC
TGGAAACAAGAAAACGGTATGTGGTACTTCTACAATACTGATGGTTCAATGGCGACAGGA
TGGCTCCAAAACAACGGTTCATGGTACTACCTAAACGCTAACGGTTCAATGGCAACAGGT
TGGGTGAAAGATGGAGATACCTGGTACTATCTTGAAGCATCAGGTGCTATGAAAGCAAGC
CAATGGTTCAAAGTATCAGATAAATGGTACTATGTCAACAGCAATGGCGCTATGGCGACA
GGATGGCTCCAATACAATGGTTCATGGTACTACTAAACAGTAATGGCGCTATGGCGACAG
GATGGCTCCAATACAATGGTTCATGGTACTACCTAAACAGTAATGGCGCTATGGCGACAG
GATGGCTCCAATACAATGGTTCATGGTACTACCTAAACAGTAATGGCGCTATGGCGACAG
GTTGGGCTAAAGTCAACGGTTCATGGTACTACCTAAACGCTAACGGTTCAATGGCAACAG
GTTGGGTGAAAGATGGAGATACCTGGTACTATCTTGAAGCATCAGGTGCTATGAAAGCAA
GCCAATGGTTCAAAGTATCAGATAAATGGTACTATGTCAATGGCTTAGGTGCCCTTGCAG
TCAACACAACTGTAGATGGCTATAAAGTCAATGCCAATGGTGAATGGGTTTAA60
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2153
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPJ_0148 [new locus tag: SPJ_RS00740 ]
- symbol: SPJ_0148
- description:
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for TIGR4
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- DeepLocPro:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq:
- UniProt:
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: no polycistronic organisation predicted
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
S Hammerschmidt, G Bethe, P H Remane, G S Chhatwal
Identification of pneumococcal surface protein A as a lactoferrin-binding protein of Streptococcus pneumoniae.
Infect Immun: 1999, 67(4);1683-7
[PubMed:10085004] [WorldCat.org] [DOI] (P p)A H Tu, R L Fulgham, M A McCrory, D E Briles, A J Szalai
Pneumococcal surface protein A inhibits complement activation by Streptococcus pneumoniae.
Infect Immun: 1999, 67(9);4720-4
[PubMed:10456922] [WorldCat.org] [DOI] (P p)S K Hollingshead, R Becker, D E Briles
Diversity of PspA: mosaic genes and evidence for past recombination in Streptococcus pneumoniae.
Infect Immun: 2000, 68(10);5889-900
[PubMed:10992499] [WorldCat.org] [DOI] (P p)L S McDaniel, J S Sheffield, E Swiatlo, J Yother, M J Crain, D E Briles
Molecular localization of variable and conserved regions of pspA and identification of additional pspA homologous sequences in Streptococcus pneumoniae.
Microb Pathog: 1992, 13(4);261-9
[PubMed:1363703] [WorldCat.org] [DOI] (P p)Mirza Shaper, Susan K Hollingshead, William H Benjamin, David E Briles
PspA protects Streptococcus pneumoniae from killing by apolactoferrin, and antibody to PspA enhances killing of pneumococci by apolactoferrin [corrected].
Infect Immun: 2004, 72(9);5031-40
[PubMed:15321996] [WorldCat.org] [DOI] (P p)M J Crain, W D Waltman, J S Turner, J Yother, D F Talkington, L S McDaniel, B M Gray, D E Briles
Pneumococcal surface protein A (PspA) is serologically highly variable and is expressed by all clinically important capsular serotypes of Streptococcus pneumoniae.
Infect Immun: 1990, 58(10);3293-9
[PubMed:1698178] [WorldCat.org] [DOI] (P p)J Yother, D E Briles
Structural properties and evolutionary relationships of PspA, a surface protein of Streptococcus pneumoniae, as revealed by sequence analysis.
J Bacteriol: 1992, 174(2);601-9
[PubMed:1729249] [WorldCat.org] [DOI] (P p)L S McDaniel, B A Ralph, D O McDaniel, D E Briles
Localization of protection-eliciting epitopes on PspA of Streptococcus pneumoniae between amino acid residues 192 and 260.
Microb Pathog: 1994, 17(5);323-37
[PubMed:7723659] [WorldCat.org] [DOI] (P p)J Yother, J M White
Novel surface attachment mechanism of the Streptococcus pneumoniae protein PspA.
J Bacteriol: 1994, 176(10);2976-85
[PubMed:7910604] [WorldCat.org] [DOI] (P p)R C Tart, L S McDaniel, B A Ralph, D E Briles
Truncated Streptococcus pneumoniae PspA molecules elicit cross-protective immunity against pneumococcal challenge in mice.
J Infect Dis: 1996, 173(2);380-6
[PubMed:8568299] [WorldCat.org] [DOI] (P p)