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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 20-DEC-2020
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae SPN034156
- locus tag: SPN034156_RS05325 [old locus tag: SPN034156_09410 ]
- pan locus tag?: PNEUPAN003715000
- symbol: malQ
- pan gene symbol?: malQ
- synonym:
- product: 4-alpha-glucanotransferase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPN034156_RS05325 [old locus tag: SPN034156_09410 ]
- symbol: malQ
- product: 4-alpha-glucanotransferase
- replicon: chromosome
- strand: -
- coordinates: 971606..973123
- length: 1518
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_021006 (971606..973123) NCBI
- BioCyc:
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_1933 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1501ATGAAAAAACGTCAAAGTGGTGTGTTGATGCACATCTCTTCTCTTCCAGGAGCTTACGGA
ATCGGATCATTTGGTCAAAGTGCTTACGACTTCGTTGATTTCTTGGTCCGTACAAAACAA
CGTTACTGGCAAATCCTTCCATTAGGAGCAACTAGTTACGGGGATTCTCCTTACCAATCT
TTCTCAGCCTTCGCAGGAAACACTCATTTTATCGATTTAGATATCTTGGTGGAGCAAGGT
TTGTTGGAAGCAAGTGACCTTGAAGGAGTTGACTTTGGTAGCGATGCGTCTGAAGTTGAC
TATGCTAAAATCTACTATGCACGTCGTCCTCTTTTAGAAAAAGCGGTGAAACGTTTCTTT
GAAGTCGGAGATGTTAAAGATTTTGAGAAATTTGCTCAAGACAACCAATCATGGCTTGAG
CTCTTTGCTGAGTATATGGCTATCAAAGAGCATTTTGACAATCTTGCTTGGACTGAATGG
CCAGATGCAGATGCTCGTGCTCGTAAAGCTTCAGCACTTGAAAGCTATCGTGAGCAATTG
GCAGACAAGTTGGTTTACCACCGTGTGACTCAATACTTCTTCTTCCAACAATGGTTGAAA
TTGAAAGCTTACGCTAACGACAACCACATCGAAATCGTTGGGGACATGCCAATCTACGTA
GCGGAAGATTCAAGTGATATGTGGGCAAATCCACATCTCTTCAAAACAGATGTCAATGGT
AAGGCTACTTGTATCGCAGGATGCCCACCAGATGAGTTTTCTGTAACTGGTCAGCTTTGG
GGTAATCCAATCTATGACTGGGAAGCAATGGACAAAGACGGCTACAAATGGTGGATTGAA
CGCTTGCGTGAAAGCTTCAAAATCTACGATATCGTTCGTATCGACCACTTCCGTGGCTTC
GAATCTTACTGGGAAATCCCTGCTGGTTCCGATACAGCAGCACCTGGTGAGTGGGTGAAA
GGTCCAGGCTACAAGCTTTTTGCAGCCGTTAAGGAAGACCTTGGTGAGCTAAACATCATC
GCAGAAGACCTTGGCTTCATGACAGATGAAGTGATCGAATTGCGTGAACGTACTGGCTTC
CCAGGAATGAAGATTCTTCAATTTGCCTTCAACCCAGAAGACGAAAGCATTGATAGCCCA
CACTTGGCACCTGCTAACTCAGTTATGTACACAGGAACACACGATAACAATACGGTTCTT
GGTTGGTACCGTAATGAGATTGATGATGCGACTCGTGAGTACATGGCTCGTTACACGAAC
CGTAAAGAATACGAAACAGTGGTACACGCTATGCTTCGTACAGTATTTTCATCAGTTAGC
TTTATGGCAATTGCAACTATGCAAGATTTACTAGAATTGGATGAGGCAGCTCGTATGAAC
TTCCCATCTACCCTTGGTGGAAACTGGTCTTGGCGTATGACTGAAGATCAATTGACACCA
GCTGTCGAGGAAGGTTTGCTTGACTTGACAACAATTTATCGCCGAATTAATGAAAATTTG
GTAGATTTAAAGAAATAA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPN034156_RS05325 [old locus tag: SPN034156_09410 ]
- symbol: MalQ
- description: 4-alpha-glucanotransferase
- length: 505
- theoretical pI: 4.46106
- theoretical MW: 58035.8
- GRAVY: -0.382772
⊟Function[edit | edit source]
- reaction: EC 2.4.1.25? ExPASy4-alpha-glucanotransferase Transfers a segment of a (1->4)-alpha-D-glucan to a new position in an acceptor, which may be glucose or a (1->4)-alpha-D-glucan
- TIGRFAM: Energy metabolism Biosynthesis and degradation of polysaccharides 4-alpha-glucanotransferase (TIGR00217; EC 2.4.1.25; HMM-score: 372.7)
- TheSEED: see SPN034156_09410
- PFAM: Glyco_hydro_tim (CL0058) Glyco_hydro_77; 4-alpha-glucanotransferase (PF02446; HMM-score: 559.9)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.97
- Cytoplasmic Membrane Score: 0
- Cellwall Score: 0.01
- Extracellular Score: 0.02
- Internal Helix: 1
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.180402
- TAT(Tat/SPI): 0.019736
- LIPO(Sec/SPII): 0.040356
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000747287 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKKRQSGVLMHISSLPGAYGIGSFGQSAYDFVDFLVRTKQRYWQILPLGATSYGDSPYQSFSAFAGNTHFIDLDILVEQGLLEASDLEGVDFGSDASEVDYAKIYYARRPLLEKAVKRFFEVGDVKDFEKFAQDNQSWLELFAEYMAIKEHFDNLAWTEWPDADARARKASALESYREQLADKLVYHRVTQYFFFQQWLKLKAYANDNHIEIVGDMPIYVAEDSSDMWANPHLFKTDVNGKATCIAGCPPDEFSVTGQLWGNPIYDWEAMDKDGYKWWIERLRESFKIYDIVRIDHFRGFESYWEIPAGSDTAAPGEWVKGPGYKLFAAVKEDLGELNIIAEDLGFMTDEVIELRERTGFPGMKILQFAFNPEDESIDSPHLAPANSVMYTGTHDNNTVLGWYRNEIDDATREYMARYTNRKEYETVVHAMLRTVFSSVSFMAIATMQDLLELDEAARMNFPSTLGGNWSWRMTEDQLTPAVEEGLLDLTTIYRRINENLVDLKK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- data available for TIGR4
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_1933 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.