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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 14-DEC-2023

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae SPNA45
  • locus tag: SPNA45_RS00575 [old locus tag: SPNA45_00104 ]
  • pan locus tag?: PNEUPAN003774000
  • symbol: malQ
  • pan gene symbol?: malQ
  • synonym:
  • product: 4-alpha-glucanotransferase

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPNA45_RS00575 [old locus tag: SPNA45_00104 ]
  • symbol: malQ
  • product: 4-alpha-glucanotransferase
  • replicon: chromosome
  • strand: +
  • coordinates: 102116..103633
  • length: 1518
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_018594 (102116..103633) NCBI
  • BioCyc: SPNA45_RS00575 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_1933 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    1441
    1501
    ATGAAAAAACGTCAAAGTGGTGTGTTGATGCACATCTCTTCTCTTCCAGGAGCTTACGGA
    ATCGGATCATTTGGTCAAAGTGCTTACGACTTCGTTGATTTCTTGATCCGTACAAAACAA
    CGTTACTGGCAAATCCTTCCATTAGGAGCAACTAGTTACGGAGATTCTCCTTACCAATCT
    TTCTCAGCCTTCGCAGGAAACACTCATTTTATCGATTTAGATATCTTGGTGGAGCAAGGT
    TTGTTGGAAGCAAGTGACCTTGAAGGAGTTGACTTTGGTAGCGATGCGTCTGAAGTTGAC
    TATGCTAAAATCTACTATGCACGTCGTCCTCTTTTAGAAAAAGCGGTGAAACGTTTCTTT
    GAAGTCGGAGATGTTAAAGATTTTGAGAAATTTGCTCAAGACAACCAATCATGGCTTGAG
    CTCTTTGCTGAGTATATGGCTATCAAAGAGTATTTTGACAATCTTGCTTGGACTGAATGG
    CCAGATGCAGATGCTCGTGCTCGTAAAGCTTCAACACTTGAAAGCTATCGTGAGCAATTG
    GCAGACAAGTTGGTTTACCACCGTGTGACTCAATACTTCTTCTTCCAACAATGGTTGAAA
    TTGAAAGCTTACGCTAACGACAACCACATCGAAATCGTTGGGGACATGCCAATCTACGTA
    GCGGAAGATTCAAGTGATATGTGGGCAAATCCACATCTCTTCAAAACAGATGTCAATGGT
    AAGGCTACTTGTATCGCAGGATGCCCACCAGATGAGTTTTCTGTAACTGGTCAGCTTTGG
    GGTAATCCAATCTATGACTGGGAAGCAATGGACAAAGACGGCTACAAATGGTGGATTGAA
    CGCTTGCGTGAAAGCTTCAAAATCTACGATATCGTTCGTATCGACCACTTCCGTGGCTTC
    GAATCTTACTGGGAAATCCCTGCTGGTTCCGATACAGCAGCACCTGGTGAGTGGGTGAAA
    GGTCCAGGCTACAAGCTTTTTGCAGCCGTTAAGGAAGAACTTGGTGAGCTAAACATCATC
    GCAGAAGACCTTGGCTTCATGACAGATGAAGTGATCGAATTGCGTGAACGTACTGGCTTC
    CCAGGAATGAAGATTCTTCAATTTGCCTTCAACCCAGAAGACGAAAGCATTGATAGCCCA
    CACTTGGCACCTGCTAACTCAGTTATGTACACAGGAACACACGATAACAATACGGTTCTT
    GGTTGGTACCGTAATGAGATTGATGATGCGACTCGTGAGTACATGGCTCGTTACACGAAC
    CGTAAAGAATACGAAACAGTGGTACACGCTATGCTTCGTACAGTATTTTCATCAGTTAGC
    TTTATGGCAATTGCAACTATGCAAGATTTACTAGAATTGGATGAGGCAGCTCGTATGAAC
    TTCCCATCTACCCTTGGTGGAAACTGGTCTTGGCGTATGACTGAAGATCAATTGACACCA
    GCTGTCGAGGAAGGTTTGCTTGACTTGACAACAATTTATCGCCGAATTAATGAAAATTTG
    GTAGATTTAAAGAAATAA
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1440
    1500
    1518

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPNA45_RS00575 [old locus tag: SPNA45_00104 ]
  • symbol: MalQ
  • description: 4-alpha-glucanotransferase
  • length: 505
  • theoretical pI: 4.43626
  • theoretical MW: 58119.9
  • GRAVY: -0.383366

⊟Function[edit | edit source]

  • reaction:
    EC 2.4.1.25?  ExPASy
    4-alpha-glucanotransferase Transfers a segment of a (1->4)-alpha-D-glucan to a new position in an acceptor, which may be glucose or a (1->4)-alpha-D-glucan
  • TIGRFAM:
    Metabolism Energy metabolism Biosynthesis and degradation of polysaccharides 4-alpha-glucanotransferase (TIGR00217; EC 2.4.1.25; HMM-score: 375.2)
  • TheSEED: data available for D39, Hungary19A-6, TIGR4
  • PFAM:
    Glyco_hydro_tim (CL0058) Glyco_hydro_77; 4-alpha-glucanotransferase (PF02446; HMM-score: 558.4)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic
    • Cytoplasmic Score: 9.97
    • Cytoplasmic Membrane Score: 0
    • Cellwall Score: 0.01
    • Extracellular Score: 0.02
    • Internal Helix: 1
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.9721
    • Cytoplasmic Membrane Score: 0.0017
    • Cell wall & surface Score: 0.0007
    • Extracellular Score: 0.0255
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.165411
    • TAT(Tat/SPI): 0.018182
    • LIPO(Sec/SPII): 0.038711
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_000747279 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MKKRQSGVLMHISSLPGAYGIGSFGQSAYDFVDFLIRTKQRYWQILPLGATSYGDSPYQSFSAFAGNTHFIDLDILVEQGLLEASDLEGVDFGSDASEVDYAKIYYARRPLLEKAVKRFFEVGDVKDFEKFAQDNQSWLELFAEYMAIKEYFDNLAWTEWPDADARARKASTLESYREQLADKLVYHRVTQYFFFQQWLKLKAYANDNHIEIVGDMPIYVAEDSSDMWANPHLFKTDVNGKATCIAGCPPDEFSVTGQLWGNPIYDWEAMDKDGYKWWIERLRESFKIYDIVRIDHFRGFESYWEIPAGSDTAAPGEWVKGPGYKLFAAVKEELGELNIIAEDLGFMTDEVIELRERTGFPGMKILQFAFNPEDESIDSPHLAPANSVMYTGTHDNNTVLGWYRNEIDDATREYMARYTNRKEYETVVHAMLRTVFSSVSFMAIATMQDLLELDEAARMNFPSTLGGNWSWRMTEDQLTPAVEEGLLDLTTIYRRINENLVDLKK

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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