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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 06-FEB-2015

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae ATCC 700669
  • locus tag: SPN23F12130 [new locus tag: SPN23F_RS13000 ]
  • pan locus tag?: PNEUPAN000226000
  • symbol: ntpK
  • pan gene symbol?: ntpK
  • synonym:
  • product: V-type sodium ATP synthase subunit K

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SPN23F12130 [new locus tag: SPN23F_RS13000 ]
  • symbol: ntpK
  • product: V-type sodium ATP synthase subunit K
  • replicon: chromosome
  • strand: -
  • coordinates: 1180026..1180502
  • length: 477
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    ATGGAACATTTAGCAACTTATTTTTCAACCTATGGAGGAGCTTTCTTCGCTGCATTGGGA
    ATTGTATTGGCGGTTGGATTAAGCGGTATGGGGTCTGCTTATGGAGTTGGTAAGGCTGGG
    CAATCTGCCGCAGCTTTACTGAAAGAACAGCCAGAAAAATTTGCCTCAGCTTTGATATTG
    CAACTATTGCCCGGAACACAAGGATTATATGGTTTTGTTATTGGAATTTTGATTTGGTTG
    CAATTAACTCCAGAACTTCCTTTGGAAAAAGGCGTTGCTTATTTCTTTGTAGCTCTTCCA
    ATTGCTATTGTAGGATACTTTTCGGCTAAGCATCAAGGAAATGTAGCAGTAGCGGGAATG
    CAAATCTTGGCTAAAAGACCAAAAGAATTCATGAAGGGAGCAATTTTGGCTGCCATGGTA
    GAAACCTATGCAATTCTTGCCTTTGTCGTATCATTCATTTTGACCCTTCGTGTATAA
    60
    120
    180
    240
    300
    360
    420
    477

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SPN23F12130 [new locus tag: SPN23F_RS13000 ]
  • symbol: NtpK
  • description: V-type sodium ATP synthase subunit K
  • length: 158
  • theoretical pI: 9.58387
  • theoretical MW: 16702.8
  • GRAVY: 0.857595

⊟Function[edit | edit source]

  • reaction:
    EC 3.6.3.15?  ExPASy
    Sodium-transporting two-sector ATPase ATP + H2O + Na+(In) = ADP + phosphate + Na+(Out)
  • TIGRFAM:
    Metabolism Transport and binding proteins Cations and iron carrying compounds V-type ATPase, C subunit (TIGR01100; EC 3.6.3.14; HMM-score: 36.7)
    and 1 more
    alternate F1F0 ATPase, F0 subunit C (TIGR03322; EC 3.6.3.-; HMM-score: 20.6)
  • TheSEED  :
    • V-type ATP synthase subunit K (EC 3.6.3.14)
    Respiration ATP synthases V-Type ATP synthase  V-type ATP synthase subunit K (EC 3.6.3.14)
  • PFAM:
    no clan defined ATP-synt_C; ATP synthase subunit C (PF00137; HMM-score: 100.6)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0
    • Cytoplasmic Membrane Score: 10
    • Cellwall Score: 0
    • Extracellular Score: 0
    • Internal Helices: 4
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.303348
    • TAT(Tat/SPI): 0.093051
    • LIPO(Sec/SPII): 0.084469
  • predicted transmembrane helices (TMHMM): 4

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: CAR69016 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MEHLATYFSTYGGAFFAALGIVLAVGLSGMGSAYGVGKAGQSAAALLKEQPEKFASALILQLLPGTQGLYGFVIGILIWLQLTPELPLEKGVAYFFVALPIAIVGYFSAKHQGNVAVAGMQILAKRPKEFMKGAILAAMVETYAILAFVVSFILTLRV

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator:

⊟Expression data[edit | edit source]

  • PneumoExpress for strain D39V:

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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