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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 13-DEC-2020
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae ATCC 700669
- locus tag: SPN23F_RS07830 [old locus tags: SPN23F15510 SPN23F_15510 ]
- pan locus tag?: PNEUPAN000565000
- symbol: SPN23F_RS07830
- pan gene symbol?: —
- synonym:
- product: hypothetical protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPN23F_RS07830 [old locus tags: SPN23F15510 SPN23F_15510 ]
- symbol: SPN23F_RS07830
- product: hypothetical protein
- replicon: chromosome
- strand: -
- coordinates: 1511020..1511475
- length: 456
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_011900 (1511020..1511475) NCBI
- BioCyc: SPN23F_RS07830 BioCyc
- MicrobesOnline: see SPN23F15510
- PneumoBrowse for strain D39V:
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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361
421TTGCCTAGAGATGGAACTAAAAATTTAAAACCAGTTACAGAACGAACCAAAGATGAAGCA
AGAGCTATTAGCTCAAAAGGAGGTAAAGCATCTGGCATAGCAAGAAGAAAAAAAGCTGAT
CTCAAAAAAGCATTTGAAACCCTCTTATCTTTGGATGTGACGGATAGTAAAATCAAGAAA
CAACTTGAGGAGATGGGTATGGCTGGCAATAACGAGGCTTTGCTAGCCTTTGCAACCTTT
CAGCAAGCTGTAAAAGGCAATCAGAAAGCGACTGAGAACATAATCAAGCTGACAAATACT
AAAGATAAATACGATATACAAGAACAGAAAGAGCGTATTAAAGCACTCAAATATGAAAAT
AGAGAGCGTGCTGAAGCTGAGAAAGGCTCAAGTGAAACTATCGAGATAGTGGATGCATGG
GCTGAAGATGTGAGGGGGGCAACGGATGACCTTTAA60
120
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456
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPN23F_RS07830 [old locus tags: SPN23F15510 SPN23F_15510 ]
- symbol: SPN23F_RS07830
- description: hypothetical protein
- length: 151
- theoretical pI: 9.68731
- theoretical MW: 16829.9
- GRAVY: -0.901987
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SPN23F15510
- PFAM: Hydrophilin (CL0385) KGG; Stress-induced bacterial acidophilic repeat motif (PF10685; HMM-score: 22.6)and 2 moreno clan defined DUF5681; Family of unknown function (DUF5681) (PF18932; HMM-score: 11)AIF-MLS; Mitochondria Localisation Sequence (PF14962; HMM-score: 9.1)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 7.5
- Cytoplasmic Membrane Score: 1.15
- Cellwall Score: 0.62
- Extracellular Score: 0.73
- Internal Helices: 0
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.009344
- TAT(Tat/SPI): 0.003067
- LIPO(Sec/SPII): 0.001663
- predicted transmembrane helices (TMHMM): 0
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_001136857 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MPRDGTKNLKPVTERTKDEARAISSKGGKASGIARRKKADLKKAFETLLSLDVTDSKIKKQLEEMGMAGNNEALLAFATFQQAVKGNQKATENIIKLTNTKDKYDIQEQKERIKALKYENRERAEAEKGSSETIEIVDAWAEDVRGATDDL
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: SPN23F_RS07725 < SPN23F_RS07730 < SPN23F_RS07735 < SPN23F_RS07740 < SPN23F_RS07745 < SPN23F_RS07750 < SPN23F_RS07755 < SPN23F_RS07760 < SPN23F_RS07765 < SPN23F_RS07770 < SPN23F_RS07775 < SPN23F_RS07780 < SPN23F_RS07785 < SPN23F_RS07790 < SPN23F_RS07795 < SPN23F_RS07800 < SPN23F_RS07805 < SPN23F_RS07810 < SPN23F_RS07815 < SPN23F_RS13580 < SPN23F_RS07820 < SPN23F_RS07825 < SPN23F_RS07830
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V:
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.