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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 13-DEC-2020
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae ATCC 700669
- locus tag: SPN23F_RS11425 [old locus tags: SPN23F22250 SPN23F_22250 ]
- pan locus tag?: PNEUPAN003927000
- symbol: SPN23F_RS11425
- pan gene symbol?: —
- synonym:
- product: isoprenylcysteine carboxyl methyltransferase family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPN23F_RS11425 [old locus tags: SPN23F22250 SPN23F_22250 ]
- symbol: SPN23F_RS11425
- product: isoprenylcysteine carboxyl methyltransferase family protein
- replicon: chromosome
- strand: -
- coordinates: 2172874..2173401
- length: 528
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_011900 (2172874..2173401) NCBI
- BioCyc: SPN23F_RS11425 BioCyc
- MicrobesOnline: see SPN23F22250
- PneumoBrowse for strain D39V: SPV_2018 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
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481ATGGTATTAGCGATTATTTTAGTAACATTCCTTATTCGATTGATTTTTTTAAAGCGTTCG
ATAGAGAATGAGAAACGAATCCTTAGCAATGGCGGGAAAGAATTTGGAGTTGAGAATACA
AAACGATTAACGTTGGCTCATATTGTTTTTTATCTCTCTTGCCTCGTTGAAGCAATGGTG
CATAAGACAATGTTTGATGGCATGGGCATGGTTGGTTTGGTCTTGCTTATTTTTTCTATG
CTGATGTTGATGTTGGTGATTCACTTGTTGGGAGATATTTGGACAGTGAAGCTTATGCTT
GTCAATAATCACAAATATGTAGATCATATCTTGTTTAGGACAGTAAAACACCCTAATTAC
TTTTTAAATATTTTACCTGAGTTGATTGGCTTGACCTTGTTGAGTCATGCCTATATGACT
TTTGTTTTAGTTTTTCCAGTTTATGCAGTTATTTTGTATCGACGAATAGCTGAAGAGGAA
AAGCTATTACATGAAGTTATAATCCCAAATGGAAGCATAAAGAGATAA60
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528
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPN23F_RS11425 [old locus tags: SPN23F22250 SPN23F_22250 ]
- symbol: SPN23F_RS11425
- description: isoprenylcysteine carboxyl methyltransferase family protein
- length: 175
- theoretical pI: 9.83415
- theoretical MW: 20236.5
- GRAVY: 0.751429
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: see SPN23F22250
- PFAM: Steroid_dh (CL0115) ICMT; Isoprenylcysteine carboxyl methyltransferase (ICMT) family (PF04140; HMM-score: 78.7)and 3 morePEMT; Phospholipid methyltransferase (PF04191; HMM-score: 25.7)DUF1295; Protein of unknown function (DUF1295) (PF06966; HMM-score: 21.3)VSA (CL0656) Stevor; Subtelomeric Variable Open Reading frame (PF17410; HMM-score: 6.4)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 4
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.017891
- TAT(Tat/SPI): 0.000417
- LIPO(Sec/SPII): 0.00853
- predicted transmembrane helices (TMHMM): 2
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000241928 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MVLAIILVTFLIRLIFLKRSIENEKRILSNGGKEFGVENTKRLTLAHIVFYLSCLVEAMVHKTMFDGMGMVGLVLLIFSMLMLMLVIHLLGDIWTVKLMLVNNHKYVDHILFRTVKHPNYFLNILPELIGLTLLSHAYMTFVLVFPVYAVILYRRIAEEEKLLHEVIIPNGSIKR
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: pspC < SPN23F_RS11425 < hk06 < rr06
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_2018 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.