⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae Hu17
- locus tag: SPNHU17_RS02700 [old locus tag: SPNHU17_00586 ]
- pan locus tag?: PNEUPAN001394000
- symbol: SPNHU17_RS02700
- pan gene symbol?: blpH
- synonym:
- product: sensor histidine kinase
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS, pseudogene
- locus tag: SPNHU17_RS02700 [old locus tag: SPNHU17_00586 ]
- symbol: SPNHU17_RS02700
- product: sensor histidine kinase
- replicon: chromosome
- strand: +
- coordinates: 537373..538672
- length: 1300
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NZ_CP020549 (537373..538672) NCBI
- BioCyc: SPNHU17_RS02700 BioCyc
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0469 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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1261ATGAACATTACTTGGATATTGTTGTATGCACTTGTTATTAATGGACTAGAAATTGTCATT
TTCTTTAAAGTAGATGGAATTGGTCTCACTTTCGATAGAATTTTTAAGGCCTTTCTTCTG
AAATTTCTTCTAGGGATCATTTTTACGACTTTTCAATTTTTGGCTGTAAGTAAATATTTG
TCCTATTTTAAGAGGGCTTCCTAAAAAAATCCTTATTTTTTATGGTCTCTTCCCAATGAT
ATTAGTAGAGCTCTTTTACAGAGGTGTTTCCTATTTTGTGCTTCCATTTTTGGGGCAAGG
AATTGTAGATGGGGATGGCAATCCTATCTTTTTATTGATTATGATATTCGTTTGCTTCAT
AGTTTTAGTCTTTTTGAAATGGTTAGACTATGATTTCACTAGATTGAGAAGGGAGTTTCT
AGATACAGGTTTTCAAAAGTCTCTTACTAAGATTAACTGGGCAATGGGGGCTTATTATCT
AGTGATGCAAAGTCTATCTTACCTTGAATATGAACAAGGTATTCAATCAACGACTGTTCG
CCATCTCATCCTAGTGTTTTACCTACTCTTTTTTATGGGGGGTATCAAGAAATTGGATAC
CTATTTGAAGGAAAAACTTCAGGAGGAACTGAACCAAGAGCAGACCTTGCGCTACAGAGA
TATGGAACGCTATAGTCGGCATATAGAGGAACTTTACAAGGAAATTCGGAGTTTTCGCCA
TGACTACACTAACCTCTTAACCAGCTTACGTTTGGGCATTGAAGAGGAGGATATGGAGCA
GATAAAAGAGATCTACGACTCGGTCTTAAGGGATTCCAGTCAGAAATTGCAGGACAATAA
ATATGACCTGGGCAGATTGGTGAATATTCGTGACCGTGCCCTCAAGAGTCTCCTAGCTGG
AAAATTTATAAAAGCTAGAGAAAAGAACATTGTCTTTAATGTTGAAGTTCCTGAGGAGAT
TCAGGTTGAGGGGATGAGCCTACTTGATTTTCTAACCATTGTGTCTATCCTTTGTGACAA
TGCTATTGAAGCTAGTGCAGAGGCCAGTCAACCTCATGTTTCAATCGCCTTTTTAAAAAA
TGGAGCACAGGAGACTTTTATCATTGAAAACTCCATCAAAGAAGAGGGCATCGATATTTC
TGAAATCTTCTCCTTTGGAGCAAGTTCTAAAGGGGAGGAGAGAGGAGTTGGTCTCTATAC
CGTTATGAAAATTGTGGAAAGTCATCCCAATACCAATCTAAATACTACCTGCCAAAATCA
AGTCTTTCGTCAGGTACTTACTGTGATACATGCAGAATGA60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPNHU17_RS02700 [old locus tag: SPNHU17_00586 ]
- symbol: SPNHU17_RS02700
- description: sensor histidine kinase
- length:
- theoretical pI:
- theoretical MW:
- GRAVY:
⊟Function[edit | edit source]
- TIGRFAM:
- TheSEED: data available for D39, Hungary19A-6, TIGR4
- PFAM:
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb:
- DeepLocPro:
- SignalP:
- predicted transmembrane helices (TMHMM):
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: see SPNHU17_00586
- UniProt:
⊟Protein sequence[edit | edit source]
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0469 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]
⊟Literature[edit | edit source]
⊟References[edit | edit source]
⊟Relevant publications[edit | edit source]
A de Saizieu, C Gardès, N Flint, C Wagner, M Kamber, T J Mitchell, W Keck, K E Amrein, R Lange
Microarray-based identification of a novel Streptococcus pneumoniae regulon controlled by an autoinduced peptide.
J Bacteriol: 2000, 182(17);4696-703
[PubMed:10940007] [WorldCat.org] [DOI] (P p)Wei-Yun Wholey, Travis J Kochan, David N Storck, Suzanne Dawid
Coordinated Bacteriocin Expression and Competence in Streptococcus pneumoniae Contributes to Genetic Adaptation through Neighbor Predation.
PLoS Pathog: 2016, 12(2);e1005413
[PubMed:26840124] [WorldCat.org] [DOI] (I e)Morten Kjos, Eric Miller, Jelle Slager, Frank B Lake, Oliver Gericke, Ian S Roberts, Daniel E Rozen, Jan-Willem Veening
Expression of Streptococcus pneumoniae Bacteriocins Is Induced by Antibiotics via Regulatory Interplay with the Competence System.
PLoS Pathog: 2016, 12(2);e1005422
[PubMed:26840404] [WorldCat.org] [DOI] (I e)