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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 20-DEC-2020
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae OXC141
- locus tag: SPNOXC_RS03420 [old locus tags: SPNOXC06410 SPNOXC_06410 ]
- pan locus tag?: PNEUPAN001651000
- symbol: SPNOXC_RS03420
- pan gene symbol?: glnH3
- synonym:
- product: cysteine ABC transporter substrate-binding protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPNOXC_RS03420 [old locus tags: SPNOXC06410 SPNOXC_06410 ]
- symbol: SPNOXC_RS03420
- product: cysteine ABC transporter substrate-binding protein
- replicon: chromosome
- strand: -
- coordinates: 645517..646383
- length: 867
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_017592 (645517..646383) NCBI
- BioCyc: SPNOXC_RS03420 BioCyc
- MicrobesOnline:
- PneumoBrowse for strain D39V: SPV_0615 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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841ATGAAACTATTCAAACCACTCTTAACTGTTTTAGCACTTGCCTTTGCCCTTATCTTTATC
ACTGCTTGTAGCTCAGGTGGAAACGCTGGTCCATCCTCTGGAAAAACAACTGCCAAAGCT
CGCACTATCGATGAAAACAAAAAAAGCGGTGAACTGCGAATCGCCGTGTTTGGAGATAAA
AAACCGTTTGGCTACGTTGACAATGATGGTTCTTACCAAGGCTACGATATTGAACTAGGG
AACCAACTAGCTCAAGACCTTGGTGTCAAGGTTAAATACATTTCAGTCGATGCTGCCAAC
CGTGCGGAATACTTGATTTCAAACAAGGTAGATATTACTCTTGCTAACTTTACAGTAACT
GACGAACGTAAGAAACAAGTTGATTTTGCCCTTCCATATATGAAAGTTTCTCTGGGTGTC
GTATCACCTAAGACTGGTCTCATTACAGACGTCAAACAACTTGAAGGTAAAACCTTAATT
GTCACAAAAGGAACGACTGCTGAGACTTATTTTGAAAAGAATCATCCAGAAATCAAACTC
CAAAAATACGACCAATACAGTGACTCTTACCAAGCTCTTCTTGACGGACGTGGAGATGCC
TTTTCAACTGACAATACGGAAGTTCTAGCTTGGGCGCTTGAAAATAAAGGATTTGAAGTA
GGAATTACTTCCCTCGGTGATCCCGATACCATTGCGGCAGCAGTTCAAAAAGGCAACCAA
GAATTGCTAGACTTCATCAATAAAGATATTGAAAAATTAGGCAAGGAAAACTTCTTCCAC
AAGGCCTATGAAAAAACACTTCACCCAACCTACGGTGACGCTGCTAAAGCAGATGACCTG
GTTGTTGAAGGTGGAAAAGTTGATTAG60
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⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPNOXC_RS03420 [old locus tags: SPNOXC06410 SPNOXC_06410 ]
- symbol: SPNOXC_RS03420
- description: cysteine ABC transporter substrate-binding protein
- length: 288
- theoretical pI: 5.08288
- theoretical MW: 31442.3
- GRAVY: -0.315625
⊟Function[edit | edit source]
- ⊞TIGRFAM: Transport and binding proteins Amino acids, peptides and amines lysine-arginine-ornithine-binding periplasmic protein (TIGR01096; HMM-score: 128.4)and 3 more
- TheSEED: see SPNOXC06410
- ⊞PFAM: PBP (CL0177) SBP_bac_3; Bacterial extracellular solute-binding proteins, family 3 (PF00497; HMM-score: 167)and 3 more
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000765250 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MKLFKPLLTVLALAFALIFITACSSGGNAGPSSGKTTAKARTIDENKKSGELRIAVFGDKKPFGYVDNDGSYQGYDIELGNQLAQDLGVKVKYISVDAANRAEYLISNKVDITLANFTVTDERKKQVDFALPYMKVSLGVVSPKTGLITDVKQLEGKTLIVTKGTTAETYFEKNHPEIKLQKYDQYSDSYQALLDGRGDAFSTDNTEVLAWALENKGFEVGITSLGDPDTIAAAVQKGNQELLDFINKDIEKLGKENFFHKAYEKTLHPTYGDAAKADDLVVEGGKVD
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_0615 PneumoExpress