Jump to navigation
Jump to search
PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 22-NOV-2024
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae P1031
- locus tag: SPP_RS10980 [old locus tag: SPP_2227 ]
- pan locus tag?: PNEUPAN003871000
- symbol: dltB
- pan gene symbol?: dltB
- synonym:
- product: D-alanyl-lipoteichoic acid biosynthesis protein DltB
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SPP_RS10980 [old locus tag: SPP_2227 ]
- symbol: dltB
- product: D-alanyl-lipoteichoic acid biosynthesis protein DltB
- replicon: chromosome
- strand: -
- coordinates: 2044834..2046078
- length: 1245
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_012467 (2044834..2046078) NCBI
- BioCyc: SPP_RS10980 BioCyc
- MicrobesOnline: see SPP_2227
- PneumoBrowse for strain D39V: SPV_2004 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
- 1
61
121
181
241
301
361
421
481
541
601
661
721
781
841
901
961
1021
1081
1141
1201ATGATGGAGTTTTTTCAACAGCTTCCTCATTTAGAGCCATATGGCAATCCTCAGTATTTT
GTTTATGTGATTGCTGCAACCTTGCCCATCTTTATAGGTCTCTTTTTCAAGAAACGCTTT
GCCTGGTATGAAGTGTTGGTAAGTCTCTTCTTTATTGTCACCATGTTGGTGGGTGGAAAG
ACCAATCAACTAGCTGCCTTGGGTATTTACCTTTGCTGGGAAATATTGCTCCTGCTTTTC
TACAAGCATTATCGAAAAAGCAAGGATGGCAAGTGGGTCTTCTACTTAGTTAGTTTTCTG
TCCCTACTTCCGATTATCTTTGTCAAGGTGCAACCAGCTATCAATGGAACGCAGTCTTTG
CTTGGGTTCTTGGGAATTTCTTACCTTACCTTTCGTTCGGTTGGGATTGTCATCGAGCTG
AGAGATGGAGTGATTAAGGATTTTACCCTCTGGGAATTCCTCCGTTTCCTTCTCTTCATG
CCAACTTTCTCGAGTGGTCCAATCGATCGCTTTAAGCGATTTAATGAAAATTATCAGGCT
ATTCCTGAGCGAGATGAGTTGATGGATATGCTGGATGAATCTGTCCGCTATATCATGTGG
GGCTTTTTGTATAAGTTTATCCTAGCTCATGTTTTAGGAGAGACCTTACTACCTCCTCTG
AAGAATTTAGCCTTGCAGTCAGGTGGCTTCTTTAATCTCTATGCCTTGGCAGTTATGTAT
ACTTTTGGTCTGGAACTCTTCTTTGACTTTGCAGGTTATTCTATGTTTGCTTTGGCCATC
TCAAACTTGATGGGAATCCGTAGCCCTATCAACTTTAACAAGCCCTTTTTATCAAGGGAT
TTAAAGGAGTTTTGGAATCGCTGGCATATGAGTCTGTCCTTCTGGTTCCGTGACTTTGTC
TTTATGCGAATGGTGATGGTGTTAACCAGAAAGAAAGTCTTTAAAAATCGTAATGTAACC
TCAAGCATGGCCTACATTGTAAATATGCTGATTATGGGATTTTGGCATGGTGTGACCTGG
TACTATATCGCCTATGGACTCTTTCATGGACTAGGCTTGGTCATCAATGATGCCTGGGTT
CGCAAGAAAAAAACGCTCAATAAGGAACGGAAAAAAGCAGGGAAGGCTGCCCTACCTGAG
AATCGCTGGATTCAGTTGCTTGGCATGGTTGTCACTTTCCATGTTGTCATGTTGTCATTC
TTAATCTTTTCTGGATTCTTGAATAATCTATGGTTTAAAAAATAA60
120
180
240
300
360
420
480
540
600
660
720
780
840
900
960
1020
1080
1140
1200
1245
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SPP_RS10980 [old locus tag: SPP_2227 ]
- symbol: DltB
- description: D-alanyl-lipoteichoic acid biosynthesis protein DltB
- length: 414
- theoretical pI: 10.2544
- theoretical MW: 48747.8
- GRAVY: 0.415217
⊟Function[edit | edit source]
- TIGRFAM: Cell envelope Biosynthesis and degradation of murein sacculus and peptidoglycan D-alanyl-lipoteichoic acid biosynthesis protein DltB (TIGR04091; HMM-score: 538.9)
- TheSEED: see SPP_2227
- PFAM: MBOAT-like (CL0517) MBOAT; MBOAT, membrane-bound O-acyltransferase family (PF03062; HMM-score: 40.2)and 1 moreMBOAT_2; Membrane bound O-acyl transferase family (PF13813; HMM-score: 17.5)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic Membrane
- Cytoplasmic Score: 0
- Cytoplasmic Membrane Score: 10
- Cellwall Score: 0
- Extracellular Score: 0
- Internal Helices: 10
- SignalP: no predicted signal peptide
- SP(Sec/SPI): 0.001508
- TAT(Tat/SPI): 0.000085
- LIPO(Sec/SPII): 0.00131
- predicted transmembrane helices (TMHMM): 9
⊟Accession numbers[edit | edit source]
- GI:
- RefSeq: WP_000969752 NCBI
- UniProt:
⊟Protein sequence[edit | edit source]
- MMEFFQQLPHLEPYGNPQYFVYVIAATLPIFIGLFFKKRFAWYEVLVSLFFIVTMLVGGKTNQLAALGIYLCWEILLLLFYKHYRKSKDGKWVFYLVSFLSLLPIIFVKVQPAINGTQSLLGFLGISYLTFRSVGIVIELRDGVIKDFTLWEFLRFLLFMPTFSSGPIDRFKRFNENYQAIPERDELMDMLDESVRYIMWGFLYKFILAHVLGETLLPPLKNLALQSGGFFNLYALAVMYTFGLELFFDFAGYSMFALAISNLMGIRSPINFNKPFLSRDLKEFWNRWHMSLSFWFRDFVFMRMVMVLTRKKVFKNRNVTSSMAYIVNMLIMGFWHGVTWYYIAYGLFHGLGLVINDAWVRKKKTLNKERKKAGKAALPENRWIQLLGMVVTFHVVMLSFLIFSGFLNNLWFKK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
- MicrobesOnline: dltD < dltC < dltB < dltA < SPP_RS10990
⊟Regulation[edit | edit source]
- regulator:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_2004 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You are kindly invited to share additional interesting facts.