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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BM6001
serotype 19F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7465
serotype 1
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 31-JAN-2014

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae TIGR4
  • locus tag: SP_0720 [new locus tag: SP_RS03525 ]
  • pan locus tag?: PNEUPAN001642000
  • symbol: SP_0720
  • pan gene symbol?: ykoD
  • synonym:
  • product: ABC transporter, ATP-binding protein

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: SP_0720 [new locus tag: SP_RS03525 ]
  • symbol: SP_0720
  • product: ABC transporter, ATP-binding protein
  • replicon: chromosome
  • strand: +
  • coordinates: 685561..686946
  • length: 1386
  • essential: unknown

⊟Accession numbers[edit | edit source]

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    421
    481
    541
    601
    661
    721
    781
    841
    901
    961
    1021
    1081
    1141
    1201
    1261
    1321
    1381
    ATGGGTCTGGAACTACGAGCGATTCAGTCCCCAATCTTCTCTGAGCCGTTTGATTTTACT
    TTTCATGCGCAAGCCTTTACCTTGTTAGTTGGGAGTAGTGGGTCTGGAAAATCCAGCCTC
    TTTCAAATGATTGCCCAAGTTAGTTCTCTTCCCTATAGCGGTCAAGTCCTGATAGATGGG
    AGCGAGGTCAGTCAGCTTTCTATCGTCGAACGTGTCCAGACGGTTGGTATTCTCTTGCAA
    AATCCTAATCATCAATTTACCATGGAGAGCTTGTTTGAGGAGTTGGTTTTTACCATGGAA
    AATATCGGCTATCACCTTCAGGAAATTGATTCTAAAATAGCAGAGGTTGTCCAGCAATGT
    CGTTGCAAGGACATCTTGCACCGTCTCATCCATCACTTATCAGGTGGGGAAAAGCAAAAA
    GCAGCGCTGGCTGTCCTCTTTGCCATGAATCCTAGGGTCTATCTCTTGGATGAGCCCTTC
    GCTTCCATTGACCGCAAGAGCAGAATCGAGATATTGGAGATTCTAAAAGAGTTGGTCTAT
    GATGGGAAGACAGTTATTTTGTGCGACCATGATTTATCTGACTATAAAGCCTATATCGAC
    CATATGGTGGAGCTAAGAGACGGAAAACTAAGGGAAGTGTTTCAAATCCCTTCCTATGAG
    ATGACACAGGTTGCTTCAAAGGAAGTTGCTTCTAGCCCGGAACTATTCCATATGAACCGT
    GTGACTGGTGAGCTTGGTAATCGCCCCCTCTTTTCAATTGCTGATTTCACATTCTATCAA
    GGGATTTCCTGTATCCTGGGTGACAATGGTGTCGGGAAATCAACCCTCTTTCGGTCTATT
    CTTCAATTTCAAAAGTATAAGGGGAGCATTACTTGGAAGGGTTCGGTCCTGAAAAAGAAA
    AAGAGTTTGTATCGTGATCTGACTGGTGTTGTTCAGGAAGCTGAGAAGCAGTTTATCCGA
    GTCAGTCTGCGAGAGGAGCTTCAATTAGATGGACCTGATTCTGAAAGAAATCAGCGGATT
    TTTCAAGCTTTACGATATTTTGATTTGGAGCAGGCAGTCGATAAGAGTCCCTATCAATTA
    AGTGGTGGTCAGCAAAAAATTCTTCAGCTCCTGACCATCTTGACCAGTAAGGCTTCCGTG
    ATCTTGCTAGATGAACCTTTTGCAGGTTTGGATGATAGAGCCTGCCATTATTTTTGCAAG
    TGGATTGTGGAGGAGAGGAATCAAGGAAGAAGTTTTCTGCTCATTAGTCATCGTTTAGAC
    CCTTTGATTTCTGTGGTTGATTATTGGATTGAGATGACTAGTCAGGGTCTTCGGCATGTG
    AAAGAAGTGACCATTACCAAACCACTTACATCTCAGAGTAGCAATACCCAAGGGGAGGTG
    AGATAG
    60
    120
    180
    240
    300
    360
    420
    480
    540
    600
    660
    720
    780
    840
    900
    960
    1020
    1080
    1140
    1200
    1260
    1320
    1380
    1386

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: SP_0720 [new locus tag: SP_RS03525 ]
  • symbol: SP_0720
  • description: ABC transporter, ATP-binding protein
  • length: 461
  • theoretical pI: 6.38291
  • theoretical MW: 52357.7
  • GRAVY: -0.150325

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Unknown substrate energy-coupling factor transporter ATPase (TIGR04521; EC 3.6.3.-; HMM-score: 218)
    Metabolism Transport and binding proteins Unknown substrate energy-coupling factor transporter ATPase (TIGR04520; EC 3.6.3.-; HMM-score: 202.5)
    Metabolism Transport and binding proteins Cations and iron carrying compounds cobalt ABC transporter, ATP-binding protein (TIGR01166; HMM-score: 195.3)
    and 85 more
    Cellular processes Cellular processes Toxin production and resistance putative bacteriocin export ABC transporter, lactococcin 972 group (TIGR03608; HMM-score: 158.3)
    Metabolism Transport and binding proteins Unknown substrate putative bacteriocin export ABC transporter, lactococcin 972 group (TIGR03608; HMM-score: 158.3)
    thiol reductant ABC exporter, CydD subunit (TIGR02857; HMM-score: 153.9)
    Metabolism Transport and binding proteins Anions sulfate ABC transporter, ATP-binding protein (TIGR00968; EC 3.6.3.25; HMM-score: 147.8)
    Metabolism Transport and binding proteins Other thiamine ABC transporter, ATP-binding protein (TIGR01277; EC 3.6.3.-; HMM-score: 146.9)
    Cellular processes Cellular processes Cell division cell division ATP-binding protein FtsE (TIGR02673; HMM-score: 146)
    Metabolism Transport and binding proteins Anions phosphate ABC transporter, ATP-binding protein (TIGR00972; EC 3.6.3.27; HMM-score: 143.1)
    Metabolism Transport and binding proteins Amino acids, peptides and amines polyamine ABC transporter, ATP-binding protein (TIGR01187; EC 3.6.3.31; HMM-score: 139.3)
    Metabolism Transport and binding proteins Other daunorubicin resistance ABC transporter, ATP-binding protein (TIGR01188; HMM-score: 138.9)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking heme ABC exporter, ATP-binding protein CcmA (TIGR01189; EC 3.6.3.41; HMM-score: 137.6)
    Metabolism Transport and binding proteins Other heme ABC exporter, ATP-binding protein CcmA (TIGR01189; EC 3.6.3.41; HMM-score: 137.6)
    Metabolism Transport and binding proteins Amino acids, peptides and amines glycine betaine/L-proline transport ATP binding subunit (TIGR01186; HMM-score: 136)
    Metabolism Transport and binding proteins Anions molybdate ABC transporter, ATP-binding protein (TIGR02142; EC 3.6.3.29; HMM-score: 133.3)
    Cell structure Cell envelope Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides LPS export ABC transporter ATP-binding protein (TIGR04406; HMM-score: 133.2)
    Metabolism Transport and binding proteins Other LPS export ABC transporter ATP-binding protein (TIGR04406; HMM-score: 133.2)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system (TIGR03864; HMM-score: 131.3)
    Metabolism Transport and binding proteins Anions phosphonate ABC transporter, ATP-binding protein (TIGR02315; EC 3.6.3.28; HMM-score: 130.4)
    Metabolism Transport and binding proteins Amino acids, peptides and amines putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein (TIGR03265; HMM-score: 129.5)
    Cellular processes Cellular processes Pathogenesis type I secretion system ATPase (TIGR03375; HMM-score: 129.2)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking type I secretion system ATPase (TIGR03375; HMM-score: 129.2)
    Metabolism Transport and binding proteins Amino acids, peptides and amines urea ABC transporter, ATP-binding protein UrtE (TIGR03410; HMM-score: 128.7)
    proposed F420-0 ABC transporter, ATP-binding protein (TIGR03873; HMM-score: 126.6)
    Metabolism Transport and binding proteins Cations and iron carrying compounds nickel import ATP-binding protein NikD (TIGR02770; HMM-score: 125.9)
    Metabolism Transport and binding proteins Cations and iron carrying compounds nickel import ATP-binding protein NikE (TIGR02769; EC 3.6.3.24; HMM-score: 123.3)
    2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT (TIGR03258; HMM-score: 119.9)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking lipoprotein releasing system, ATP-binding protein (TIGR02211; EC 3.6.3.-; HMM-score: 117.8)
    Metabolism Transport and binding proteins Anions nitrate ABC transporter, ATP-binding proteins C and D (TIGR01184; HMM-score: 113.2)
    Metabolism Transport and binding proteins Other nitrate ABC transporter, ATP-binding proteins C and D (TIGR01184; HMM-score: 113.2)
    lantibiotic protection ABC transporter, ATP-binding subunit (TIGR03740; HMM-score: 111.5)
    ABC exporter ATP-binding subunit, DevA family (TIGR02982; HMM-score: 110.1)
    Metabolism Transport and binding proteins Amino acids, peptides and amines urea ABC transporter, ATP-binding protein UrtD (TIGR03411; HMM-score: 110.1)
    Metabolism Transport and binding proteins Unknown substrate anchored repeat-type ABC transporter, ATP-binding subunit (TIGR03771; HMM-score: 108.2)
    D-methionine ABC transporter, ATP-binding protein (TIGR02314; EC 3.6.3.-; HMM-score: 106.4)
    thiol reductant ABC exporter, CydC subunit (TIGR02868; HMM-score: 106.3)
    Cellular processes Cellular processes Other nodulation ABC transporter NodI (TIGR01288; HMM-score: 104.2)
    Metabolism Transport and binding proteins Other nodulation ABC transporter NodI (TIGR01288; HMM-score: 104.2)
    gliding motility-associated ABC transporter ATP-binding subunit GldA (TIGR03522; HMM-score: 99.2)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids D-xylose ABC transporter, ATP-binding protein (TIGR02633; EC 3.6.3.17; HMM-score: 96.2)
    ATP-binding cassette protein, ChvD family (TIGR03719; HMM-score: 91.9)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking type I secretion system ATPase (TIGR01842; HMM-score: 89.7)
    Metabolism Transport and binding proteins Other antigen peptide transporter 2 (TIGR00958; HMM-score: 88.8)
    Cellular processes Cellular processes Biosynthesis of natural products NHLM bacteriocin system ABC transporter, ATP-binding protein (TIGR03797; HMM-score: 86.4)
    Metabolism Transport and binding proteins Amino acids, peptides and amines NHLM bacteriocin system ABC transporter, ATP-binding protein (TIGR03797; HMM-score: 86.4)
    Metabolism Transport and binding proteins Amino acids, peptides and amines choline ABC transporter, ATP-binding protein (TIGR03415; HMM-score: 86.1)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking type I secretion system ATPase (TIGR01846; HMM-score: 84.9)
    ABC transporter, permease/ATP-binding protein (TIGR02204; HMM-score: 84.7)
    Metabolism Transport and binding proteins Other pigment precursor permease (TIGR00955; HMM-score: 84.4)
    Metabolism Biosynthesis of cofactors, prosthetic groups, and carriers Other FeS assembly ATPase SufC (TIGR01978; HMM-score: 83)
    phosphonate C-P lyase system protein PhnL (TIGR02324; HMM-score: 82.3)
    Cell structure Cell envelope Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides lipid A export permease/ATP-binding protein MsbA (TIGR02203; HMM-score: 77.1)
    Metabolism Transport and binding proteins Other lipid A export permease/ATP-binding protein MsbA (TIGR02203; HMM-score: 77.1)
    ectoine/hydroxyectoine ABC transporter, ATP-binding protein EhuA (TIGR03005; HMM-score: 75.4)
    Metabolism Energy metabolism Methanogenesis methyl coenzyme M reductase system, component A2 (TIGR03269; HMM-score: 73.6)
    Cellular processes Cellular processes Biosynthesis of natural products NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein (TIGR03796; HMM-score: 72.9)
    Metabolism Transport and binding proteins Amino acids, peptides and amines NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein (TIGR03796; HMM-score: 72.9)
    Metabolism Transport and binding proteins Amino acids, peptides and amines cyclic peptide transporter (TIGR01194; HMM-score: 72.1)
    Metabolism Transport and binding proteins Other cyclic peptide transporter (TIGR01194; HMM-score: 72.1)
    Genetic information processing Protein fate Protein and peptide secretion and trafficking ABC-type bacteriocin transporter (TIGR01193; HMM-score: 68.2)
    Genetic information processing Protein fate Protein modification and repair ABC-type bacteriocin transporter (TIGR01193; HMM-score: 68.2)
    Metabolism Transport and binding proteins Other ABC-type bacteriocin transporter (TIGR01193; HMM-score: 68.2)
    Metabolism Transport and binding proteins Other rim ABC transporter (TIGR01257; HMM-score: 66.1)
    Genetic information processing DNA metabolism DNA replication, recombination, and repair excinuclease ABC subunit A (TIGR00630; EC 3.1.25.-; HMM-score: 54.8)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids glucan exporter ATP-binding protein (TIGR01192; EC 3.6.3.42; HMM-score: 44.9)
    Metabolism Transport and binding proteins Other multi drug resistance-associated protein (MRP) (TIGR00957; HMM-score: 44.8)
    Metabolism Central intermediary metabolism Phosphorus compounds phosphonate C-P lyase system protein PhnK (TIGR02323; HMM-score: 43.6)
    Metabolism Transport and binding proteins Anions cystic fibrosis transmembrane conductor regulator (CFTR) (TIGR01271; EC 3.6.3.49; HMM-score: 39.7)
    Metabolism Transport and binding proteins Other pleiotropic drug resistance family protein (TIGR00956; HMM-score: 34)
    Metabolism Transport and binding proteins Carbohydrates, organic alcohols, and acids peroxysomal long chain fatty acyl transporter (TIGR00954; HMM-score: 28.6)
    type IV secretion/conjugal transfer ATPase, VirB4 family (TIGR00929; HMM-score: 26.5)
    Genetic information processing DNA metabolism DNA replication, recombination, and repair exonuclease SbcC (TIGR00618; HMM-score: 24.4)
    Hypothetical proteins Conserved TIGR02680 family protein (TIGR02680; HMM-score: 21.1)
    Unknown function General small GTP-binding protein domain (TIGR00231; HMM-score: 20.5)
    Genetic information processing Protein synthesis Translation factors ribosome small subunit-dependent GTPase A (TIGR00157; EC 3.6.-.-; HMM-score: 18.8)
    restriction system-associated AAA family ATPase (TIGR04435; HMM-score: 17.7)
    Cellular processes Cellular processes Cell division chromosome segregation protein SMC (TIGR02168; HMM-score: 17.6)
    Genetic information processing DNA metabolism Chromosome-associated proteins chromosome segregation protein SMC (TIGR02168; HMM-score: 17.6)
    Cellular processes Cellular processes Cell division chromosome segregation protein SMC (TIGR02169; HMM-score: 16.7)
    Genetic information processing DNA metabolism Chromosome-associated proteins chromosome segregation protein SMC (TIGR02169; HMM-score: 16.7)
    Genetic information processing DNA metabolism DNA replication, recombination, and repair DNA replication and repair protein RecF (TIGR00611; HMM-score: 16.3)
    Genetic information processing DNA metabolism DNA replication, recombination, and repair DnaA regulatory inactivator Hda (TIGR03420; HMM-score: 14.6)
    Genetic information processing DNA metabolism DNA replication, recombination, and repair Holliday junction DNA helicase RuvA (TIGR00084; EC 3.6.4.12; HMM-score: 12.7)
    Metabolism Purines, pyrimidines, nucleosides, and nucleotides Nucleotide and nucleoside interconversions guanylate kinase (TIGR03263; EC 2.7.4.8; HMM-score: 12.4)
    Cellular processes Cellular processes Detoxification Hg(II)-responsive transcriptional regulator (TIGR02051; HMM-score: 12.3)
    Signal transduction Regulatory functions DNA interactions Hg(II)-responsive transcriptional regulator (TIGR02051; HMM-score: 12.3)
    Unknown function General GTP-binding protein YchF (TIGR00092; HMM-score: 11.8)
  • TheSEED  :
    • Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
    Membrane Transport Membrane Transport - no subcategory ECF class transporters  Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
  • PFAM:
    P-loop_NTPase (CL0023) ABC_tran; ABC transporter (PF00005; HMM-score: 159)
    and 41 more
    AAA_21; AAA domain, putative AbiEii toxin, Type IV TA system (PF13304; HMM-score: 76.2)
    SMC_N; RecF/RecN/SMC N terminal domain (PF02463; HMM-score: 71.8)
    SbcC_Walker_B; SbcC/RAD50-like, Walker B motif (PF13558; HMM-score: 36.1)
    AAA_22; AAA domain (PF13401; HMM-score: 35.4)
    AAA_29; P-loop containing region of AAA domain (PF13555; HMM-score: 34.8)
    AAA_16; AAA ATPase domain (PF13191; HMM-score: 34.4)
    AAA_23; AAA domain (PF13476; HMM-score: 33.9)
    RsgA_GTPase; RsgA GTPase (PF03193; HMM-score: 27.8)
    AAA; ATPase family associated with various cellular activities (AAA) (PF00004; HMM-score: 27.2)
    AAA_15; AAA ATPase domain (PF13175; HMM-score: 22.7)
    MMR_HSR1; 50S ribosome-binding GTPase (PF01926; HMM-score: 22.5)
    G-alpha; G-protein alpha subunit (PF00503; HMM-score: 22.3)
    NACHT; NACHT domain (PF05729; HMM-score: 22.2)
    Roc; Ras of Complex, Roc, domain of DAPkinase (PF08477; HMM-score: 20.8)
    RNA_helicase; RNA helicase (PF00910; HMM-score: 20)
    AAA_5; AAA domain (dynein-related subfamily) (PF07728; HMM-score: 19.5)
    Zeta_toxin; Zeta toxin (PF06414; HMM-score: 17.3)
    AAA_33; AAA domain (PF13671; HMM-score: 16.8)
    DUF815; Protein of unknown function (DUF815) (PF05673; HMM-score: 16)
    ATPase_2; ATPase domain predominantly from Archaea (PF01637; HMM-score: 15.8)
    DUF5906; Family of unknown function (DUF5906) (PF19263; HMM-score: 15.7)
    AAA_18; AAA domain (PF13238; HMM-score: 15.6)
    TsaE; Threonylcarbamoyl adenosine biosynthesis protein TsaE (PF02367; HMM-score: 15.3)
    AAA_27; AAA domain (PF13514; HMM-score: 15.1)
    ATPase; KaiC (PF06745; HMM-score: 14.8)
    AAA_28; AAA domain (PF13521; HMM-score: 14.7)
    NB-ARC; NB-ARC domain (PF00931; HMM-score: 14.4)
    NTPase_1; NTPase (PF03266; HMM-score: 14.1)
    Septin; Septin (PF00735; HMM-score: 13.7)
    Sigma54_activat; Sigma-54 interaction domain (PF00158; HMM-score: 13.6)
    MCM; MCM P-loop domain (PF00493; HMM-score: 13.6)
    AAA_7; P-loop containing dynein motor region (PF12775; HMM-score: 13.6)
    AAA_25; AAA domain (PF13481; HMM-score: 13.5)
    AAA_30; AAA domain (PF13604; HMM-score: 13.5)
    FtsK_SpoIIIE; FtsK/SpoIIIE family (PF01580; HMM-score: 13.3)
    ATP-synt_ab; ATP synthase alpha/beta family, nucleotide-binding domain (PF00006; HMM-score: 12.8)
    no clan defined RPW8; Arabidopsis broad-spectrum mildew resistance protein RPW8 (PF05659; HMM-score: 12.6)
    P-loop_NTPase (CL0023) Dynamin_N; Dynamin family (PF00350; HMM-score: 12.5)
    FeoB_N; Ferrous iron transport protein B (PF02421; HMM-score: 12.3)
    DUF87; Helicase HerA, central domain (PF01935; HMM-score: 12.2)
    AAA_10; AAA-like domain (PF12846; HMM-score: 12.1)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 1.05
    • Cytoplasmic Membrane Score: 8.78
    • Cellwall Score: 0.08
    • Extracellular Score: 0.09
    • Internal Helices: 0
  • DeepLocPro: Cytoplasmic
    • Cytoplasmic Score: 0.5187
    • Cytoplasmic Membrane Score: 0.4797
    • Cell wall & surface Score: 0.0002
    • Extracellular Score: 0.0014
  • SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.022788
    • TAT(Tat/SPI): 0.02837
    • LIPO(Sec/SPII): 0.005591
  • predicted transmembrane helices (TMHMM): 0

⊟Accession numbers[edit | edit source]

⊟Protein sequence[edit | edit source]

  • MGLELRAIQSPIFSEPFDFTFHAQAFTLLVGSSGSGKSSLFQMIAQVSSLPYSGQVLIDGSEVSQLSIVERVQTVGILLQNPNHQFTMESLFEELVFTMENIGYHLQEIDSKIAEVVQQCRCKDILHRLIHHLSGGEKQKAALAVLFAMNPRVYLLDEPFASIDRKSRIEILEILKELVYDGKTVILCDHDLSDYKAYIDHMVELRDGKLREVFQIPSYEMTQVASKEVASSPELFHMNRVTGELGNRPLFSIADFTFYQGISCILGDNGVGKSTLFRSILQFQKYKGSITWKGSVLKKKKSLYRDLTGVVQEAEKQFIRVSLREELQLDGPDSERNQRIFQALRYFDLEQAVDKSPYQLSGGQQKILQLLTILTSKASVILLDEPFAGLDDRACHYFCKWIVEERNQGRSFLLISHRLDPLISVVDYWIEMTSQGLRHVKEVTITKPLTSQSSNTQGEVR

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

  • regulator: THI-box (transcription termination) regulon
    THI-box(RNA)important in Thiamine biosynthesis; RegPrecise 

⊟Transcription[edit | edit source]

  • transcription start site:

⊟Expression data[edit | edit source]

⊟Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊟Other Information[edit | edit source]

You can add further information about the gene and protein here. [edit]

⊟Literature[edit | edit source]

⊟References[edit | edit source]

  1. ↑ 1.0 1.1 Indu Warrier, Nikhil Ram-Mohan, Zeyu Zhu, Ariana Hazery, Haley Echlin, Jason Rosch, Michelle M Meyer, Tim van Opijnen
    The Transcriptional landscape of Streptococcus pneumoniae TIGR4 reveals a complex operon architecture and abundant riboregulation critical for growth and virulence.
    PLoS Pathog: 2018, 14(12);e1007461
    [PubMed:30517198] [WorldCat.org] [DOI] (I e)

⊟Relevant publications[edit | edit source]

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