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PangenomeTIGR4
serotype 4
D39serotype 2
D39Vserotype 2
Hungary19A-6serotype 19A
EF3030serotype 19F
670-6Bserotype 6B
6A-10serotype 6A
70585serotype 5
A026serotype 19F
A66serotype 3
AP200serotype 11A
ASP0581serotype 12F
ATCC 49619serotype 19F
ATCC 700669serotype 23F
BM6001serotype 19F
BVJ1JLserotype 1
CGSP14serotype 14
G54serotype 19F
HU-OHserotype 3
Hu15serotype 19A
Hu17serotype 19A
INV104serotype 1
INV200serotype 14
JJAserotype 14
MDRSPN001serotype 19F
NCTC7465serotype 1
NCTC7466serotype 2
NU83127serotype 4
OXC141serotype 3
P1031serotype 1
R6serotype 2
SP49serotype 19A
SPN032672serotype 1
SPN034156serotype 3
SPN034183serotype 3
SPN994038serotype 3
SPN994039serotype 3
SPNA45serotype 3
ST556serotype 19F
TCH8431/19Aserotype 19A
Taiwan19F-14serotype 19F
Xen35serotype 4
gamPNI0373serotype 1
NCBI: 23-APR-2025
⊟Summary[edit | edit source]
- organism: Streptococcus pneumoniae TIGR4
- locus tag: SP_RS03400 [old locus tag: SP_0695 ]
- pan locus tag?: PNEUPAN001607000
- symbol: SP_RS03400
- pan gene symbol?: moeB
- synonym:
- product: HesA/MoeB/ThiF family protein
⊟Genome View[edit | edit source]
⊟Gene[edit | edit source]
⊟General[edit | edit source]
- type: CDS
- locus tag: SP_RS03400 [old locus tag: SP_0695 ]
- symbol: SP_RS03400
- product: HesA/MoeB/ThiF family protein
- replicon: chromosome
- strand: +
- coordinates: 664585..665289
- length: 705
- essential: unknown
⊟Accession numbers[edit | edit source]
- Location: NC_003028 (664585..665289) NCBI
- BioCyc:
- MicrobesOnline: see SP_0695
- PneumoBrowse for strain D39V: SPV_2205 PneumoBrowse
⊟Phenotype[edit | edit source]
Share your knowledge and add information here. [edit]
⊟DNA sequence[edit | edit source]
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661ATACAGAATAAAACAGTATTAGTATTAGGAGCAGGAGTCTTAGGATGTTATATATCTCTA
AGTCTAAGTATGTATGGAGTGAGGAAACTTATTGTCGCTGATTACGATATAATAGAACCA
TCAAATTTAAATAGGCAAATTCTTTATACAGAGTCGGATGTTGGTAAGGAGAAGATTAAT
GTTCTTTCTGAAAAAATACACAAGTATAATTCAGATGTTCAGGTAGTACCTATTTCTATT
AAAGTTTCTTCAGTAGAAGAATTAGAAAAAATTGTTGCGGAATATGGGAGTATAGATTTT
ATCGTTAAAGCAATTGATACGCCCATTGATATTATAAAAATTGTCAATCAATTTGCTGTA
TCGCATAAGATATCCTACATATCAGGAGGGTTTAATGGATGCTATCTTATTATTGATAAT
ATATATATCCCTACCATCGGTTCTTGCTTTGGTTGTCGGAATATAAACAAAGATATAAAT
AAGTACACTTTATCTGATAAGACAAAGTGGCCGACTACACCAGAGATGCCTGCTATTTTG
GGAGGGATAATGACTAATTTAATAATTAAAATATTTCTGGGATGTTATAATGAAATCCTA
ATAGATAACGCTTACGTTTATAATATGAGAAATCATGCTCTAAGTCAAGAAAAATATGTT
CTGGAAAACGGAGAATGTCCAATTTGTAAAAAAATAATAAAGTGA60
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705
⊟Protein[edit | edit source]
⊟General[edit | edit source]
- locus tag: SP_RS03400 [old locus tag: SP_0695 ]
- symbol: SP_RS03400
- description: HesA/MoeB/ThiF family protein
- length: 234
- theoretical pI: 7.264
- theoretical MW: 26213.5
- GRAVY: 0.15812
⊟Function[edit | edit source]
- reaction: EC 2.7.7.-? ExPASy
- TIGRFAM: Biosynthesis of cofactors, prosthetic groups, and carriers Thiamine thiazole biosynthesis adenylyltransferase ThiF (TIGR02356; EC 2.7.7.73; HMM-score: 85.8)Biosynthesis of cofactors, prosthetic groups, and carriers Thiamine thiamine biosynthesis protein ThiF (TIGR02354; HMM-score: 70.4)and 5 moreBiosynthesis of cofactors, prosthetic groups, and carriers Molybdopterin molybdopterin synthase sulfurylase MoeB (TIGR02355; HMM-score: 67.5)ubiquitin-activating enzyme E1 (TIGR01408; HMM-score: 44.3)E1-like protein-activating enzyme Gsa7p/Apg7p (TIGR01381; HMM-score: 31)PRTRC system ThiF family protein (TIGR03736; HMM-score: 17.6)Protein fate Degradation of proteins, peptides, and glycopeptides beta-aspartyl peptidase (TIGR01975; EC 3.4.19.5; HMM-score: 15.9)
- TheSEED: see SP_0695
- PFAM: NADP_Rossmann (CL0063) ThiF; ThiF family (PF00899; HMM-score: 122.4)and 4 moreShikimate_DH; Shikimate / quinate 5-dehydrogenase (PF01488; HMM-score: 15.5)FAD_binding_3; FAD binding domain (PF01494; HMM-score: 13.2)Pyr_redox_2; Pyridine nucleotide-disulphide oxidoreductase (PF07992; HMM-score: 11.5)EspA_CesA (CL0628) T3SchapCesA; Type III secretion system filament chaperone CesA (PF11439; HMM-score: 9.2)
⊟Structure, modifications & cofactors[edit | edit source]
- domains:
- modifications:
- cofactors:
- effectors:
⊟Localization[edit | edit source]
- PSORTb: Cytoplasmic
- Cytoplasmic Score: 9.67
- Cytoplasmic Membrane Score: 0.01
- Cellwall Score: 0.15
- Extracellular Score: 0.17
- Internal Helix: 1
- DeepLocPro: Cytoplasmic
- Cytoplasmic Score: 0.8564
- Cytoplasmic Membrane Score: 0.0631
- Cell wall & surface Score: 0.0001
- Extracellular Score: 0.0803
- SignalP: Signal peptide LIPO(Sec/SPII) length 15 aa
- SP(Sec/SPI): 0.15649
- TAT(Tat/SPI): 0.002895
- LIPO(Sec/SPII): 0.520037
- Cleavage Site: CS pos: 15-16. VLG-CY. Pr: 0.5157
- predicted transmembrane helices (TMHMM): 3
⊟Accession numbers[edit | edit source]
⊟Protein sequence[edit | edit source]
- MQNKTVLVLGAGVLGCYISLSLSMYGVRKLIVADYDIIEPSNLNRQILYTESDVGKEKINVLSEKIHKYNSDVQVVPISIKVSSVEELEKIVAEYGSIDFIVKAIDTPIDIIKIVNQFAVSHKISYISGGFNGCYLIIDNIYIPTIGSCFGCRNINKDINKYTLSDKTKWPTTPEMPAILGGIMTNLIIKIFLGCYNEILIDNAYVYNMRNHALSQEKYVLENGECPICKKIIK
⊟Experimental data[edit | edit source]
- protein localization:
- interaction partners:
⊟Expression & Regulation[edit | edit source]
⊟Operon[edit | edit source]
⊟Regulation[edit | edit source]
- regulator:
⊟Transcription[edit | edit source]
- transcription start site:
⊟Expression data[edit | edit source]
- PneumoExpress for strain D39V: SPV_2205 PneumoExpress
⊟Biological Material[edit | edit source]
⊟Mutants[edit | edit source]
⊟Expression vector[edit | edit source]
⊟lacZ fusion[edit | edit source]
⊟GFP fusion[edit | edit source]
⊟two-hybrid system[edit | edit source]
⊟FLAG-tag construct[edit | edit source]
⊟Antibody[edit | edit source]
⊟Other Information[edit | edit source]
You can add further information about the gene and protein here. [edit]