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PangenomeTIGR4
serotype 4
D39
serotype 2
D39V
serotype 2
Hungary19A-6
serotype 19A
EF3030
serotype 19F
670-6B
serotype 6B
6A-10
serotype 6A
70585
serotype 5
A026
serotype 19F
A66
serotype 3
AP200
serotype 11A
ASP0581
serotype 12F
ATCC 49619
serotype 19F
ATCC 700669
serotype 23F
BVJ1JL
serotype 1
CGSP14
serotype 14
G54
serotype 19F
HU-OH
serotype 3
Hu15
serotype 19A
Hu17
serotype 19A
INV104
serotype 1
INV200
serotype 14
JJA
serotype 14
MDRSPN001
serotype 19F
NCTC7466
serotype 2
NU83127
serotype 4
OXC141
serotype 3
P1031
serotype 1
R6
serotype 2
SP49
serotype 19A
SPN032672
serotype 1
SPN034156
serotype 3
SPN034183
serotype 3
SPN994038
serotype 3
SPN994039
serotype 3
SPNA45
serotype 3
ST556
serotype 19F
TCH8431/19A
serotype 19A
Taiwan19F-14
serotype 19F
Xen35
serotype 4
gamPNI0373
serotype 1

NCBI: 11-DEC-2024

⊟Summary[edit | edit source]

  • organism: Streptococcus pneumoniae A026
  • locus tag: T308_RS09890 [old locus tag: T308_09695 ]
  • pan locus tag?: PNEUPAN003611000
  • symbol: comGG
  • pan gene symbol?: comGG
  • synonym:
  • product: competence type IV pilus minor pilin ComGG

⊟Genome View[edit | edit source]

⊟Gene[edit | edit source]

⊟General[edit | edit source]

  • type: CDS
  • locus tag: T308_RS09890 [old locus tag: T308_09695 ]
  • symbol: comGG
  • product: competence type IV pilus minor pilin ComGG
  • replicon: chromosome
  • strand: -
  • coordinates: 1864294..1864707
  • length: 414
  • essential: unknown

⊟Accession numbers[edit | edit source]

  • Location: NC_022655 (1864294..1864707) NCBI
  • BioCyc: T308_RS09890 BioCyc
  • MicrobesOnline:
  • PneumoBrowse for strain D39V: SPV_1857 PneumoBrowse

⊟Phenotype[edit | edit source]

Share your knowledge and add information here. [edit]

⊟DNA sequence[edit | edit source]

  • 1
    61
    121
    181
    241
    301
    361
    GTGTGGAAAAAGAAGAAAGTTAAGGCAGGTGTTCTCCTCTATGCAGTCACCATGGCAGCT
    ATCTTTAGTCTTTTGTTGCAATTTTACTTGAACCGACAAGTCGCCCACTATCAAGACTAT
    GCTTTGAATAAAGAAAAATTGGTTGCTTTTGCCATGGCTAAACGAACCAAGGATAAAGCC
    GAGCAAGAAAGTGGGGAACAGGTCTTTAATCTAGGTCAGGTAAGCTATCAAAACAAGAAA
    ACAAGCTTGGTGACGACTGTTCGTACGGATAAGAGTCAATATGAGTTTCTGTTTCCTTCA
    GTCAAAATCAAAGAAGAGAAAAGAGATAAAAAGGAAGAGGTAGCGACTGATTCAAGCGAA
    AAAGCGGAGAAGAAAAAATCAGAAGAGAAGCCTGAAAAGAAAGAGAATTCCTAG
    60
    120
    180
    240
    300
    360
    414

⊟Protein[edit | edit source]

⊟General[edit | edit source]

  • locus tag: T308_RS09890 [old locus tag: T308_09695 ]
  • symbol: ComGG
  • description: competence type IV pilus minor pilin ComGG
  • length: 137
  • theoretical pI: 10.1715
  • theoretical MW: 15892.2
  • GRAVY: -0.869343

⊟Function[edit | edit source]

  • TIGRFAM:
    Metabolism Transport and binding proteins Cations and iron carrying compounds cation transporter family protein (TIGR00860; HMM-score: 10.4)
    Genetic information processing Transcription DNA-dependent RNA polymerase DNA-directed RNA polymerase, beta subunit (TIGR02013; EC 2.7.7.6; HMM-score: 8.6)
  • TheSEED: data available for D39, Hungary19A-6, TIGR4
  • ⊞PFAM:
    NTF2 (CL0051) DUF5104; Domain of unknown function (DUF5104) (PF17117; HMM-score: 17.8)
    and 1 more
    Peptidase_AD (CL0130) Presenilin; Presenilin (PF01080; HMM-score: 9.3)

⊟Structure, modifications & cofactors[edit | edit source]

  • domains:
  • modifications:
  • cofactors:
  • effectors:

⊟Localization[edit | edit source]

  • ⊞PSORTb: Cytoplasmic Membrane
    • Cytoplasmic Score: 0.32
    • Cytoplasmic Membrane Score: 9.55
    • Cellwall Score: 0.12
    • Extracellular Score: 0.01
    • Internal Helix: 1
  • ⊞SignalP: no predicted signal peptide
    • SP(Sec/SPI): 0.098328
    • TAT(Tat/SPI): 0.002048
    • LIPO(Sec/SPII): 0.011618
  • predicted transmembrane helices (TMHMM): 1

⊟Accession numbers[edit | edit source]

  • GI:
  • RefSeq: WP_000265630 NCBI
  • UniProt:

⊟Protein sequence[edit | edit source]

  • MWKKKKVKAGVLLYAVTMAAIFSLLLQFYLNRQVAHYQDYALNKEKLVAFAMAKRTKDKAEQESGEQVFNLGQVSYQNKKTSLVTTVRTDKSQYEFLFPSVKIKEEKRDKKEEVATDSSEKAEKKKSEEKPEKKENS

⊟Experimental data[edit | edit source]

  • protein localization:
  • interaction partners:

⊟Expression & Regulation[edit | edit source]

⊟Operon[edit | edit source]

⊟Regulation[edit | edit source]

⊟Expression data[edit | edit source]

⊞Biological Material[edit | edit source]

⊟Mutants[edit | edit source]

⊟Expression vector[edit | edit source]

⊟lacZ fusion[edit | edit source]

⊟GFP fusion[edit | edit source]

⊟two-hybrid system[edit | edit source]

⊟FLAG-tag construct[edit | edit source]

⊟Antibody[edit | edit source]

⊞Other Information[edit | edit source]

You are kindly invited to share additional interesting facts.

⊟Literature[edit | edit source]

⊟References[edit | edit source]

⊟Relevant publications[edit | edit source]

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